G119409


Basic Information

Item Value
gene id G119409
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 32341125 ~ 32341363 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU160878
CCACCAGAGGCAGCCACACCACATTCAGCAGCCCACAGCGACACCATCCACATGGTAGAGGAGCATGAGGTGAGGCGTACCCAGAGACAGTCAACTCGCGGAAGGTGGCCGGCCCTGATGCCGTCTGCGGATATGCACTGAAGGACTTTGCAGACCAGCTAGTGGGATTCTTTACTATGATCTTCAAACAGTCACTCTCTCAGCTCACTGTCCATCCTGCCTGAAGTCCTCCATCATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160878 True 239 lncRNA 0.55 1 32341125 32341363

Neighbor

gene id symbol gene type direction distance location
kirrel1b LOC101488125,LOC102302400,LOC100705859 coding upstream 15478 32232208 ~ 32325647 (+)
trnar-ucu_14 NA coding upstream 214695 32126357 ~ 32126430 (+)
sdhc sdhc,LOC103479501 coding upstream 216627 32118953 ~ 32124498 (+)
LOC120568430 LOC103373937,LOC105937883,LOC100694151 coding upstream 225178 32075076 ~ 32115947 (+)
mpz mpz,LOC102776110 coding upstream 289690 32031652 ~ 32051435 (+)
LOC120568561 NA coding downstream 5926 32347289 ~ 32355822 (+)
LOC120568571 NA coding downstream 96095 32437458 ~ 32441095 (+)
LOC120568570 NA coding downstream 131257 32472620 ~ 32486408 (+)
LOC120568820 LOC101162955,LOC103374738 coding downstream 233950 32575313 ~ 32586349 (+)
si:ch211-155e24.3 si:ch211-155e24.3,LOC108427093,LOC107549816,LOC107750208,LOC107671805 coding downstream 309941 32651304 ~ 32656857 (+)
G119398 NA non-coding upstream 216210 32124564 ~ 32124915 (+)
LOC120567918 NA non-coding upstream 281752 32056055 ~ 32059373 (+)
G119332 NA non-coding upstream 425524 31849440 ~ 31915601 (+)
G119328 NA non-coding upstream 498154 31838382 ~ 31842971 (+)
G119306 LOC103370525 non-coding upstream 609835 31730145 ~ 31731290 (+)
G119415 NA non-coding downstream 6758 32348121 ~ 32349713 (+)
G119416 NA non-coding downstream 23203 32364566 ~ 32364768 (+)
G119417 NA non-coding downstream 31200 32372563 ~ 32403711 (+)
LOC120568573 NA non-coding downstream 162849 32504212 ~ 32505293 (+)
G119453 kcnj10 non-coding downstream 207781 32549144 ~ 32555738 (+)
cadm3 cadm3 other upstream 114642 32128458 ~ 32226483 (+)
LOC120567694 LOC103373937,LOC106569580,LOC100136182,LOC107383461,LOC106960171 other upstream 269813 32067563 ~ 32071312 (+)
pip4p1a tmem55b,LOC101161334 other upstream 426421 31888908 ~ 31914704 (+)
dnaaf6 pih1d3,LOC106903480,LOC103138000,LOC103138005,LOC103137996,LOC106960166 other upstream 471630 31865755 ~ 31869495 (+)
G119257 NA other upstream 880217 31459864 ~ 31460908 (+)
LOC120568569 NA other downstream 111342 32452705 ~ 32471570 (+)
G119582 vangl2,LOC103137974 other downstream 427344 32768707 ~ 32769852 (+)
G119584 vangl2,LOC102795188 other downstream 433711 32775074 ~ 32775682 (+)
G119585 NA other downstream 439625 32780988 ~ 32781471 (+)
tep1 LOC104950563,LOC104941471 other downstream 647454 32988817 ~ 33049081 (+)

Expression


Co-expression Network