G119453 (kcnj10)


Basic Information

Item Value
gene id G119453
gene name kcnj10
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 32549144 ~ 32555738 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU160929
AAGCAGGTCTCCGTGCACCAGTGCCATCAGATACCACAGCACCCCGAACAAGAACCAGGTCCCCGCAAACGTGGCCGTGAACAGGAACAACTTGTAGCGCCACTGCATGTCCAGAAATGTTGTCCAGAGGTCCCGCATGTACAGAGCATTCCGGCCGCTGACGTGCTCGATGCGCACGTTGCTACGCCCATCTTTGGACAGGACgcgcctcctcttcctcagagTCCCACCCCCAGCGGATAAGCCACCACCCAGTAAGGGCTTTAAAACATCGGTCTGTGTTTGGGAGTGGCACACCTTCTGAGGGGAGGAGCTACGAGAGGAAGGAGGTGTGGCAGATGTCATTTTACAGCTGGGACTGCAATCTAACTTTGCGGCGCAGAGAGGAGTGGGGGAGCCCCGAGCCTCAGCCTTCCGTCCACATGTCTGCTTTGTTGTCATACGCCGGCTCACATCACTGGGACAACTGGCACTGTAACTCTGCAGGAAGAGTAACTTCAGCAGTCTGCGTCCCACAACACTGATAAACCATTGGGTAGAGTTATGGAGACAGTCATTGGCTCATGGAGCTCCTGTTTCTGATCCAAAGCCCGGTCTCACTGCTCGCAAATTCTACCAGAGGAGACAGGACTTGGCTTTATAAGGggcatctctctctcacttttactctgtctctct

Function

symbol description
kcnj10 Predicted to enable inward rectifier potassium channel activity. Predicted to be involved in potassium ion import across plasma membrane and regulation of ion transmembrane transport. Predicted to act upstream of or within several processes, including adult walking behavior; ion transmembrane transport; and regulation of resting membrane potential. Predicted to be integral component of plasma membrane. Predicted to be part of astrocyte projection and cell body. Predicted to be active in ciliary base and plasma membrane. Implicated in EAST syndrome and autosomal recessive nonsyndromic deafness 4.

NR:

description
PREDICTED: ATP-sensitive inward rectifier potassium channel 10 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160929 True 678 lncRNA 0.55 2 32549144 32555738

Neighbor

gene id symbol gene type direction distance location
LOC120568570 NA coding upstream 62736 32472620 ~ 32486408 (+)
LOC120568571 NA coding upstream 108049 32437458 ~ 32441095 (+)
LOC120568561 NA coding upstream 193322 32347289 ~ 32355822 (+)
kirrel1b LOC101488125,LOC102302400,LOC100705859 coding upstream 223497 32232208 ~ 32325647 (+)
trnar-ucu_14 NA coding upstream 422714 32126357 ~ 32126430 (+)
LOC120568820 LOC101162955,LOC103374738 coding downstream 19575 32575313 ~ 32586349 (+)
si:ch211-155e24.3 si:ch211-155e24.3,LOC108427093,LOC107549816,LOC107750208,LOC107671805 coding downstream 95566 32651304 ~ 32656857 (+)
LOC120568452 LOC103367094 coding downstream 161015 32716753 ~ 32721611 (+)
myadmb LOC104961532,LOC101466547 coding downstream 287361 32843099 ~ 32852397 (+)
ltb4r2b NA coding downstream 373713 32929451 ~ 32938337 (+)
LOC120568573 NA non-coding upstream 43851 32504212 ~ 32505293 (+)
G119417 NA non-coding upstream 145433 32372563 ~ 32403711 (+)
G119416 NA non-coding upstream 184376 32364566 ~ 32364768 (+)
G119415 NA non-coding upstream 199431 32348121 ~ 32349713 (+)
G119409 NA non-coding upstream 207781 32341125 ~ 32341363 (+)
G119519 NA non-coding downstream 8103 32563841 ~ 32564486 (+)
G119541 NA non-coding downstream 77890 32633628 ~ 32634719 (+)
G119556 NA non-coding downstream 153557 32709295 ~ 32710372 (+)
G119579 NA non-coding downstream 201645 32757383 ~ 32757653 (+)
G119583 vangl2,LOC103367097 non-coding downstream 214690 32770428 ~ 32770954 (+)
LOC120568569 NA other upstream 77574 32452705 ~ 32471570 (+)
cadm3 cadm3 other upstream 322661 32128458 ~ 32226483 (+)
LOC120567694 LOC103373937,LOC106569580,LOC100136182,LOC107383461,LOC106960171 other upstream 477832 32067563 ~ 32071312 (+)
pip4p1a tmem55b,LOC101161334 other upstream 634440 31888908 ~ 31914704 (+)
dnaaf6 pih1d3,LOC106903480,LOC103138000,LOC103138005,LOC103137996,LOC106960166 other upstream 679649 31865755 ~ 31869495 (+)
G119582 vangl2,LOC103137974 other downstream 212969 32768707 ~ 32769852 (+)
G119584 vangl2,LOC102795188 other downstream 219336 32775074 ~ 32775682 (+)
G119585 NA other downstream 225250 32780988 ~ 32781471 (+)
tep1 LOC104950563,LOC104941471 other downstream 433079 32988817 ~ 33049081 (+)
LOC120568463 NA other downstream 608178 33163916 ~ 33166100 (+)

Expression


Co-expression Network