G119623 (pex19)


Basic Information

Item Value
gene id G119623
gene name pex19
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 32837303 ~ 32838088 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU161136
ctgcATTTTTAGCCAGGCCACGAAGGGTTTCTTTAAGACAGGAAGTGAATTCTTGTTGGGACTCGGTGTCCGTGCCAACTTTGCCTGCAGCCTCCGACAGTTTATGGAAGTGCTGCAGTAGTTCTGGCTCCTCGTGGGCCAGCTCAGTCATGGCCTTCTCCCACTCCTCCTTGGCTTGGGTAGCCATGTCCCCCTCGAAGAGAGTCTCAAACAGTTTGCAGTCTTCAAGCAGGGGCGGCTACACAGGTAATAAGAAAACATGTAGCACCTTCTAGACAACATGGGGGAAGCCTGTCAGTACTAAATTGAATCAAGGCTgctttttagaaaaataatgtttttttctactcAATCTAAATCTCTTTGCCATCATTGAGTGTAATGATCAGTCTCTCCTAGACTCTTGTTGCAAATGGCCAGAGTAactgcccccccaaaaaaaaacagtcgcTGCAACTGACAAAAGTACTTTTTGGTGGGCAGTGAACTTCTTGGGGTCTGAATTTTGCAAGCTGTGCAGGTTATACAACCAACAACCAGCTGATAGAAACACTTGGAAGCAGCAAAGGTAAACAAGTTATAAAACTACGAATAAGGAAACTGGCCAAGTCAAGGACTTATAACAGACAAacttaaacaaataaacaataaataaataaacttaaaacagaaagtaaggaaatttgtgtttggtgga

Function

symbol description
pex19 Predicted to enable peroxisome membrane targeting sequence binding activity. Predicted to be involved in protein import into peroxisome membrane. Predicted to act upstream of or within peroxisome organization. Predicted to be located in membrane and peroxisome. Predicted to be integral component of membrane. Predicted to be active in peroxisomal membrane. Human ortholog(s) of this gene implicated in peroxisome biogenesis disorder 12A. Orthologous to human PEX19 (peroxisomal biogenesis factor 19).

NR:

description
PREDICTED: peroxisomal biogenesis factor 19

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161136 True 697 lncRNA 0.43 2 32837303 32838088

Neighbor

gene id symbol gene type direction distance location
LOC120568452 LOC103367094 coding upstream 115692 32716753 ~ 32721611 (+)
si:ch211-155e24.3 si:ch211-155e24.3,LOC108427093,LOC107549816,LOC107750208,LOC107671805 coding upstream 180446 32651304 ~ 32656857 (+)
LOC120568820 LOC101162955,LOC103374738 coding upstream 250954 32575313 ~ 32586349 (+)
LOC120568570 NA coding upstream 350895 32472620 ~ 32486408 (+)
LOC120568571 NA coding upstream 396208 32437458 ~ 32441095 (+)
myadmb LOC104961532,LOC101466547 coding downstream 5011 32843099 ~ 32852397 (+)
ltb4r2b NA coding downstream 91363 32929451 ~ 32938337 (+)
sdr39u1 sdr39u1 coding downstream 103118 32941206 ~ 32945386 (+)
parp2 parp2 coding downstream 115188 32953276 ~ 32973757 (+)
apol1 LOC106928621,LOC103148595,LOC106953189,LOC103370244 coding downstream 212917 33051005 ~ 33070053 (+)
G119622 pex19 non-coding upstream 103 32836081 ~ 32837200 (+)
G119586 NA non-coding upstream 43808 32793017 ~ 32793495 (+)
G119583 vangl2,LOC103367097 non-coding upstream 66349 32770428 ~ 32770954 (+)
G119579 NA non-coding upstream 79650 32757383 ~ 32757653 (+)
G119556 NA non-coding upstream 126931 32709295 ~ 32710372 (+)
G119624 NA non-coding downstream 916 32839004 ~ 32840813 (+)
G119638 NA non-coding downstream 58643 32896731 ~ 32897048 (+)
G119639 NA non-coding downstream 59027 32897115 ~ 32897468 (+)
G119640 NA non-coding downstream 59659 32897747 ~ 32898018 (+)
G119733 NA non-coding downstream 343368 33181456 ~ 33185892 (+)
G119585 NA other upstream 55832 32780988 ~ 32781471 (+)
G119584 vangl2,LOC102795188 other upstream 61621 32775074 ~ 32775682 (+)
G119582 vangl2,LOC103137974 other upstream 67451 32768707 ~ 32769852 (+)
LOC120568569 NA other upstream 365733 32452705 ~ 32471570 (+)
cadm3 cadm3 other upstream 610820 32128458 ~ 32226483 (+)
tep1 LOC104950563,LOC104941471 other downstream 150729 32988817 ~ 33049081 (+)
LOC120568463 NA other downstream 325828 33163916 ~ 33166100 (+)
G119769 grk7,LOC106528614,LOC104920904 other downstream 466734 33304822 ~ 33307864 (+)
pkn2a pkn2 other downstream 639248 33477336 ~ 33515424 (+)
gng12a gng12,LOC104920945,LOC104956611,LOC103354642 other downstream 972880 33810968 ~ 33851937 (+)

Expression


Co-expression Network