G119631 (LOC104961532,LOC101466547)


Basic Information

Item Value
gene id G119631
gene name LOC104961532,LOC101466547
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 32849719 ~ 32865274 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU161146
tctggttTACATGTGGTTTTATTGAAACACTGGATTATGTTTTCCTACAACACTGATGTGGTATGCACAATTGAAACATGAACAGTGGAATATAAAAAAGCTAAAGAATATAATATAACACTGACAACatctagagagagagaaacttcTTTTTGGTCTCTTTCTCAGAGTATTTACGACAGCAGTACAAAAACTATAGATCCAATCGACACAAATATGAATTTAGTGGTGCGAGTTTGGCGCTAACAGATGCTTTGATAATTGGAGACACCACAAATTCAAACACGCATATAAAAAACTAATATTAAGTGCACTTTAAAGATACTTTTCGTGTTTTTAACTGCACATTCTTACATATGTTCTTTCCACATATATATTCTTGCCATTGATTGTAGCTTGcagatacatatacatacacatatatcaTAACAGGAGCAAAAAGCTAGCCCTAACGTCAAGTAAACTATTTTTCTCACAACATTGGAGCCGTGTAAAAATGATAAATGATACAATCAGCTGCTATGCATACTGTTAAGGAAccaaaaaacaaaataaaaagtcttGGATTTCCAATTGTATGGCATTTGGATATTTTTTACAACAGAACATAATCTTGGCTCCCTACAGGTACAGGTTCTAGGCTCCCTACAGCTTTTCTAAATTTCCTCCATTAGCggttaaaaacagaaatactgATCGACAGTCTTTTTTTTCAGAACTGACATCAAATTGAACATAAATTTAAAGCAGAGCACTGGAAAATACCTtatgccaaaaaaaataacaaaaacatgataACAAGCCGCCATTTTCTTTGGTTTTTCTTCATTTGTCATTAcagactatgtttacatgcacatagtATTGTGGGTGTTGTAtcctatttgaatagcttactccagtatacataatacatacaatAATCTTATCTTACTTTACTTATGTACACCTTTACTATACTAATCTTGTATTTTGAGTATTACAATTGGCAATGATCTGCCATTTAAATGGATACAAAGATCCAGCAACCACATTCAGATCTCTCATAATCAAGATAAGAGTCTATCCAGGTCACTGGAAGCAAGGTTGGACATTTATGAACAGTAAGCTTCAGTAATTTAAGGGAATATTGTTGTacgtgtaaacatagccattGACCTCaacctttccctcttctctctctctatggtCCTAAGCAGTATACTTTACAAAATCAAATTTGGCAAGTTTGCAGAGGCTAAACTGGGAGtttgtgtggggagtgtgtgggggggggggtttggttTGATTACCCAGGTTGGCCAGCTGAACTTGTCGATCTCTTTAAAAGCCATGTTCACTGCCCCCATACATTGTCTCCAGTACATCCTCGGTCAACCATTACGCATGTCGTTCTTTGGGCCATTACTACTTCTCCTACTATTTCATTGTGCCAGAACTAAAGTGGAATCAAATCCTTTAATTTTCAAATTTCAAACAACAAATGGAGTTAGATTAgattacaataatacaataaactATACCAGTTGTAGTAGAACTCTACAGTCCCTTTCCCTTGGAGCACTGTATTTGACAGCAGTTTGACAGCCTGTGAGAACCTgacaaattcaattttatttggaGCATACTGCTGGCCGAACACCCTTTCTCTTCCCTCAAGCGCTGACAAACACCAGGCGGGAGGAGTAGATCAGGTCGGCCAGGTAAAGGATGAAGTTGACAGCTGTGAGCACAGCCACCGCCATGTACTTATCCCACGTGCACAGCCCCCGCGCGGTGCTACAATTGGAGGGCCTATTTTTGTTTCCGCCATTCTTGGGATCAAAGTTGAAAATGGGCCAGATGATGGTTGCTGATAGATAGAGGACCACGGCCAGCAGGGCGTAGGCAGACAGGAAGCGTGCAAACGGGAAGGGGAGGCAGCCGGTGCATTCGCCTATGCAGAGCAGGATGATGACCGCCGACAGGATGAAGCAGATGCAGTAGACGGACATGCAGTACTTGAGCGCGTCGTGGCGGTCGTACAGCACAGGGTCGGTGACGAAGACAAAGATGATGCAGGCCACAAAGGTCTCGCAGACTTTCAGCAGGCCCGGGGCTGTGGCCATGTAGCCAGCCACCTCGCCCGGACGCGCCTTGCTGATGCTCACCTCGGTAATGTAGGCGATGGTGGCCAGACAGGAGAACACGGTTGACACGATGCGGTAGTCGCGGATTTCACTCGGGCCAAAAGAGCCCTTGAGGTAGTAGAGGGGGAAGATGATGGAGGCGGACAGGCAGAGCAGGGCGGCGTAGCACGCAAAGGTGATAGGGAAGTTCTTCCACGAAACAGGGGCCCTGGTCTGAAGGCCGAAGAGCTCCACCAGGATGACAAGCAGAGTCCCGGCGAAACTGAAGGCCCAGCAGAAGATGCACCAGTCTCCGGTGCCGTGGTCGAGTCTGCCTCCATGCACGGCCACGGAAAAGGCCACGCAGGAGAAGATCAGGGCTGCCAACCGTGTCCATAGGAGGGGGCTGGAGTGGAGGACTACAGCCATGATGTGGTAGGTGAAGTAAGAAGCTGGAATGGTTCCTGTGAGATAGGAGTCTCTTCCTATTGGGAGTCACTTCCTTTAGATTTTTAAGGCCAGCCACTCAGAGAAGGCAgat
>TU161147
tgggggggggtgtgtgggggggggggtttggttTGATTACCCAGGTTGGCCAGCTGAACTTGTCGATCTCTTTAAAAGCCATGTTCACTGCCCCCATACATTGTCTCCAGTACATCCTCGGTCAACCATTACGCATGTCGTTCTTTGGGCCATTACTACTTCTCCTACTATTTCATTGTGCCAGAACTAAAGTGGAATCAAATCCTTTAATTTTCAAATTTCAAACAACAAATGGAGTTAGATTAgattacaataatacaataaactATACCAGTTGTAGTAGAACTCTACAGTCCCTTTCCCTTGGAGCACTGTATTTGACAGCAGTTTGACAGCCTGTGAGAACCTgacaaattcaattttatttggaGCATACTGCTGGCCGAACACCCTTTCTCTTCCCTCAAGCGCTGACAAACACCAGGCGGGAGGAGTAGATCAGGTCGGCCAGGTAAAGGATGAAGTTGACAGCTGTGAGCACAGCCACCGCCATGTACTTATCCCACGTGCACAGCCCCCGCGCGGTGCTACAATTGGAGGGCCTATTTTTGTTTCCGCCATTCTTGGGATCAAAGTTGAAAATGGGCCAGATGATGGTTGCTGATAGATAGAGGACCACGGCCAGCAGGGCGTAGGCAGACAGGAAGCGTGCAAACGGGAAGGGGAGGCAGCCGGTGCATTCGCCTATGCAGAGCAGGATGATGACCGCCGACAGGATGAAGCAGATGCAGTAGACGGACATGCAGTACTTGAGCGCGTCGTGGCGGTCGTACAGCACAGGGTCGGTGACGAAGACAAAGATGATGCAGGCCACAAAGGTCTCGCAGACTTTCAGCAGGCCCGGGGCTGTGGCCATGTAGCCAGCCACCTCGCCCGGACGCGCCTTGCTGATGCTCACCTCGGTAATGTAGGCGATGGTGGCCAGACAGGAGAACACGGTTGACACGATGCGGTAGTCGCGGATTTCACTCGGGCCAAAAGAGCCCTTGAGGTAGTAGAGGGGGAAGATGATGGAGGCGGACAGGCAGAGCAGGGCGGCGTAGCACGCAAAGGTGATAGGGAAGTTCTTCCACGAAACAGGGGCCCTGGTCTGAAGGCCGAAGAGCTCCACCAGGATGACAAGCAGAGTCCCGGCGAAACTGAAGGCCCAGCAGAAGATGCACCAGTCTCCGGTGCCGTGGTCGAGTCTGCCTCCATGCACGGCCACGGAAAAGGCCACGCAGGAGAAGATCAGGGCTGCCAACCGTGTCCATAGGAGGGGGCTGGAGTGGAGGACTACAGCCATGATGTGGTAGGTGAAGTAAGAAGCTGGAATGGTTCCTGTGAGATAGGAGTCTCTTCCTATTGGGAGTCACTTCCTTTAGATTTTTAAGGCCAGCCACTCAGAGAAGGCAgat

Function

NR:

description
PREDICTED: myeloid-associated differentiation marker homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161146 True 2649 TUCP 0.44 2 32849719 32852397
TU161147 False 1397 lncRNA 0.53 2 32849719 32865274

Neighbor

gene id symbol gene type direction distance location
pex19 pex19 coding downstream 8861 32833516 ~ 32840858 (-)
copa copa,LOC102794619 coding downstream 22399 32815848 ~ 32827320 (-)
ncstn ncstn coding downstream 34229 32796097 ~ 32815490 (-)
LOC120568446 vangl2 coding downstream 55937 32768595 ~ 32793782 (-)
nectin4b NA coding downstream 95597 32724800 ~ 32754122 (-)
nfatc4 nfatc4,LOC103367103 coding upstream 672 32865946 ~ 32886957 (-)
mettl17 mettl17 coding upstream 80110 32945384 ~ 32952954 (-)
si:ch211-284o19.8 NA coding upstream 102622 32967896 ~ 32976355 (-)
LOC120568453 LOC103364630 coding upstream 316182 33181456 ~ 33191469 (-)
LOC120568460 LOC101482682,LOC100703124,LOC102296331,LOC102790639,LOC103357352 coding upstream 337607 33202881 ~ 33204851 (-)
G119593 NA non-coding downstream 88876 32760572 ~ 32760843 (-)
G119590 NA non-coding downstream 92067 32757210 ~ 32757652 (-)
G119570 NA non-coding downstream 199743 32649689 ~ 32649976 (-)
G119567 NA non-coding downstream 255675 32593374 ~ 32594044 (-)
G119528 NA non-coding downstream 279037 32569997 ~ 32570682 (-)
LOC120568464 NA non-coding upstream 73427 32938701 ~ 32940160 (-)
G119686 NA non-coding upstream 107401 32972675 ~ 32973003 (-)
LOC120568465 NA non-coding upstream 307565 33172839 ~ 33176759 (-)
G119847 atp1b3,LOC104945299 non-coding upstream 427486 33292760 ~ 33296161 (-)
G119852 NA non-coding upstream 468950 33334224 ~ 33334542 (-)
LOC120567697 copa,LOC103137970 other downstream 17210 32828364 ~ 32832509 (-)
fcer1gl NA other downstream 84508 32760969 ~ 32765211 (-)
LOC120568568 NA other downstream 475201 32364461 ~ 32374518 (-)
G119465 cadm3,LOC106600493 other downstream 623359 32216502 ~ 32226360 (-)
G119379 NA other downstream 798280 32047477 ~ 32051439 (-)
zgc:66427 LOC103370245 other upstream 113932 32979206 ~ 32988559 (-)
LOC120568437 NA other upstream 351916 33217190 ~ 33256937 (-)
selenof selenof other upstream 556115 33421389 ~ 33433925 (-)
gfi1aa gfi1,LOC100698183,LOC101467858,LOC102203194,LOC102781835,LOC106958274 other upstream 779821 33645095 ~ 33649517 (-)
G119989 NA other upstream 789028 33654302 ~ 33659276 (-)

Expression


Co-expression Network