LOC120568463


Basic Information

Item Value
gene id LOC120568463
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 33163916 ~ 33166100 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU161294
ccccccccacacccaccaccaccacctgaTGTTTGCTGATTTAAATGATTCCCGCAGGGAtcatatgcacacacaggacCAGAACCCACTGAACAAAGGAACTTTTCTGCAACTCAACATTTGACTTTTACAGCTCAAGAATGGAACGAGGATTGATCCTGTTGGTTGCTGCATTGGGGGTTTATGTGGCATCGGGTGTCCAAGGAACGTCTTACTTGTCATTTTCCAATAATACACAGGTGAACATCTCTCAAAATGGTTGTGGAGTCACTAAACTGTGTGTGCAGACACCAGGCAACTGTGATCTAACTGGAAACACCAGCTGTCTGTTTGCATCTGTGATCGCCAACGGCTCTGCAATGTCCTTCCAACTCCGCGGAGACTCCGTGGGATACATCGCACTGGGACTCACTGTGAATGCTTCACAGG
>XR_005640730.1
accaccacctgaTGTTTGCTGATTTAAATGATTCCCGCAGGGAtcatatgcacacacaggacCAGAACCCACTGAACAAAGGAACTTTTCTGCAACTCAACATTTGACTTTTACAGCTCAAGAATGGAACGAGGATTGATCCTGTTGGTTGCTGCATTGGGGGTTTATGTGGCATCGGGTGTCCAAGGAACGTCTTACTTGTCATTTTCCAATAATACACAGGTGAACATCTCTCAAAATGGTTGTGGAGTCACTAAACTGTGTGTGCAGACACCAGGCAACTGTGATCTAACTGGAAACACCAGCTGTCTGTTTGCATCTGTGATCGCCAACGGCTCTGCAATGTCCTTCCAACTCCGCGGAGACTCCGTGGGATACATCGCACTGGGACTCACTGTGAATGCTTCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161294 True 429 TUCP 0.49 3 33163916 33166100
XR_005640730.1 False 410 lncRNA 0.47 3 33163933 33166098

Neighbor

gene id symbol gene type direction distance location
LOC120567698 LOC107098800,LOC105889457,LOC102791798 coding upstream 37116 33075783 ~ 33126800 (+)
apol1 LOC106928621,LOC103148595,LOC106953189,LOC103370244 coding upstream 93863 33051005 ~ 33070053 (+)
parp2 parp2 coding upstream 190159 32953276 ~ 32973757 (+)
sdr39u1 sdr39u1 coding upstream 218530 32941206 ~ 32945386 (+)
ltb4r2b NA coding upstream 225579 32929451 ~ 32938337 (+)
gk5 gk5 coding downstream 107017 33273117 ~ 33285466 (+)
atp1b3a atp1b3,LOC104945299,LOC103356916 coding downstream 126088 33292188 ~ 33298786 (+)
stk25b stk25 coding downstream 190407 33356507 ~ 33365322 (+)
trnap-ugg_4 NA coding downstream 236151 33402251 ~ 33402322 (+)
LOC120568799 LOC102786249,LOC100700331 coding downstream 242588 33408688 ~ 33410016 (+)
G119640 NA non-coding upstream 265898 32897747 ~ 32898018 (+)
G119639 NA non-coding upstream 266448 32897115 ~ 32897468 (+)
G119638 NA non-coding upstream 266868 32896731 ~ 32897048 (+)
G119624 NA non-coding upstream 323103 32839004 ~ 32840813 (+)
G119623 pex19 non-coding upstream 325828 32837303 ~ 32838088 (+)
G119733 NA non-coding downstream 15356 33181456 ~ 33185892 (+)
G119744 NA non-coding downstream 26487 33192587 ~ 33193199 (+)
G119763 NA non-coding downstream 102270 33268370 ~ 33269202 (+)
G119767 NA non-coding downstream 124230 33290330 ~ 33290580 (+)
G119901 NA non-coding downstream 372072 33538172 ~ 33562071 (+)
tep1 LOC104950563,LOC104941471 other upstream 114835 32988817 ~ 33049081 (+)
G119585 NA other upstream 382445 32780988 ~ 32781471 (+)
G119584 vangl2,LOC102795188 other upstream 388234 32775074 ~ 32775682 (+)
G119582 vangl2,LOC103137974 other upstream 394064 32768707 ~ 32769852 (+)
LOC120568569 NA other upstream 692346 32452705 ~ 32471570 (+)
G119769 grk7,LOC106528614,LOC104920904 other downstream 138722 33304822 ~ 33307864 (+)
pkn2a pkn2 other downstream 311236 33477336 ~ 33515424 (+)
gng12a gng12,LOC104920945,LOC104956611,LOC103354642 other downstream 644868 33810968 ~ 33851937 (+)
G119957 gadd45a,LOC106598934,LOC106568974 other downstream 692442 33858542 ~ 33859847 (+)
LOC120568585 LOC108244495 other downstream 789066 33955166 ~ 33957504 (+)

Expression


Co-expression Network