G119744


Basic Information

Item Value
gene id G119744
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 33192587 ~ 33193199 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU161305
tgtttctcaacgggggcggtaccgccccccagggggcgttcagaagatgatggggggcgttggaagcaatattttggaaaggggggcgttgaggtgcccttggggaGCGTTTGTTTAAAAGCtggtttaaaccaaagattcacaataacaatacatgtttacacttaaactattaaaaaaatccgtggtctgcaacattaaaagctgccagtttacagcactgcaaCTGGACGAGACGGGTATCCTAACtcttctgtgcttctgtcagctttaTTTGGCGCAGCtctgtgctgccttcatggaaacgggacgtaagagcatcatcttaaatgagctctgtagctaCTACGTGAAGCTGTGTTCagataataaattaaaaaaaagcaatcgccGCGACAtcctgttgtattctttaacccccaatgtagcacaagtagactttatatttcacagtaacagtttttcgtcagatggtttatAGAACACAACATTTTCTAGTGTACctgaatgcagcttcatttcacggagaaacagagaaagaaaagagacatgcaagagatatcgactgtgcgttgttgtttggcaaacagtcagctgttccccaaactcccgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161305 True 613 lncRNA 0.44 1 33192587 33193199

Neighbor

gene id symbol gene type direction distance location
LOC120568455 NA coding upstream 11999 33126780 ~ 33180588 (+)
LOC120567698 LOC107098800,LOC105889457,LOC102791798 coding upstream 65787 33075783 ~ 33126800 (+)
apol1 LOC106928621,LOC103148595,LOC106953189,LOC103370244 coding upstream 122534 33051005 ~ 33070053 (+)
parp2 parp2 coding upstream 218830 32953276 ~ 32973757 (+)
sdr39u1 sdr39u1 coding upstream 247201 32941206 ~ 32945386 (+)
gk5 gk5 coding downstream 79918 33273117 ~ 33285466 (+)
atp1b3a atp1b3,LOC104945299,LOC103356916 coding downstream 98989 33292188 ~ 33298786 (+)
stk25b stk25 coding downstream 163308 33356507 ~ 33365322 (+)
trnap-ugg_4 NA coding downstream 209052 33402251 ~ 33402322 (+)
LOC120568799 LOC102786249,LOC100700331 coding downstream 215489 33408688 ~ 33410016 (+)
G119733 NA non-coding upstream 6695 33181456 ~ 33185892 (+)
G119640 NA non-coding upstream 294569 32897747 ~ 32898018 (+)
G119639 NA non-coding upstream 295119 32897115 ~ 32897468 (+)
G119638 NA non-coding upstream 295539 32896731 ~ 32897048 (+)
G119624 NA non-coding upstream 351774 32839004 ~ 32840813 (+)
G119763 NA non-coding downstream 75171 33268370 ~ 33269202 (+)
G119767 NA non-coding downstream 97131 33290330 ~ 33290580 (+)
G119901 NA non-coding downstream 344973 33538172 ~ 33562071 (+)
G119922 NA non-coding downstream 404674 33597873 ~ 33598657 (+)
LOC120569016 NA non-coding downstream 668239 33861438 ~ 33866996 (+)
LOC120568463 NA other upstream 26487 33163916 ~ 33166100 (+)
tep1 LOC104950563,LOC104941471 other upstream 143506 32988817 ~ 33049081 (+)
G119585 NA other upstream 411116 32780988 ~ 32781471 (+)
G119584 vangl2,LOC102795188 other upstream 416905 32775074 ~ 32775682 (+)
G119582 vangl2,LOC103137974 other upstream 422735 32768707 ~ 32769852 (+)
G119769 grk7,LOC106528614,LOC104920904 other downstream 111623 33304822 ~ 33307864 (+)
pkn2a pkn2 other downstream 284137 33477336 ~ 33515424 (+)
gng12a gng12,LOC104920945,LOC104956611,LOC103354642 other downstream 617769 33810968 ~ 33851937 (+)
G119957 gadd45a,LOC106598934,LOC106568974 other downstream 665343 33858542 ~ 33859847 (+)
LOC120568585 LOC108244495 other downstream 761967 33955166 ~ 33957504 (+)

Expression


Co-expression Network