G119847 (atp1b3,LOC104945299)


Basic Information

Item Value
gene id G119847
gene name atp1b3,LOC104945299
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 33292760 ~ 33296161 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU161442
GCGAGGCTTCAGGCCAATGATCTATGAGGAGAGGGAAACAGGAGAGGTTGAGACTGTGTGGAAAGGCTGCTGCATTAGAAATTAATCGTTTATTTTGGGCGCTGTCGGCAAGCGAGTAAACGGATGGAGATGTGACGCTGCCTGGAATAAAAGGAATAAAAGGTTGAAATACAGACAAGTGAAAAGACAAAATTGTACAtttgttaaaggtgctctaagcgatgggACGcggttttttaggctacaacatttttagtcacatacagcaaacatctccccACTGtccactagctgcctgtcccctgaacacactgtaaaaaaaacaactgcgccaacctgcaccaccaaacataacaaacagagttccagccaataaccgacaagtatgagctggttgagccatcactgcagcagcgttagcacgtaggctacttccacaatgcgtattcatgactcaacgctgtttgttatgtttggtggtgcaggttggcgcagtttgtttgtggtgccgtttgtggagcctgggctgtctacagagaccgtggttttttacagtgtgttcaggggacaggcagctagcaggtagtgaggagatgtttgctgtatgtgacaacaaATGTTGTAACCTAAAAAATGtatcacatcacttagagcacctttaagagattttttaaagtgtattttAGTCATTTTCAGGTCAGTGAAAGTGTTACCCTGTTCATTTTCAGCAGTATGCAGGGCTTCCCCTCAGAATATCCAAAGTTGGTGTCAGAGAGTCCAGAGCAGAGACTCAGGAAGCCCCTCTTGAAGCGGCAAGCTTTCTTCGTCATGTCCTCGGTGTCATCCTGCATGAAATACTCCCCCCGGGGGCAGTCCTCgttcttctcctgctctgtaTCATtataacTTCGCAGGAAGGTCTCCAGGTGCTGGACATACTTTGCATACTTCAGCGGGTCGGATTTGTTGAACGACATATCCAGTGCATTTGGACGAATCACCAACCCTGCAACAAAGATATCAAGTCAAGTCTACATTGAGTAAAATCGcaaatgacagacagacagacagg

Function

symbol description
atp1b3 Enables ATPase activator activity; ATPase binding activity; and protein-macromolecule adaptor activity. Involved in several processes, including cellular monovalent inorganic cation homeostasis; ion transmembrane transport; and positive regulation of cation transmembrane transport. Located in plasma membrane and sperm flagellum. Part of sodium:potassium-exchanging ATPase complex.

NR:

description
PREDICTED: sodium/potassium-transporting ATPase subunit beta-3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161442 True 1072 lncRNA 0.46 2 33292760 33296161

Neighbor

gene id symbol gene type direction distance location
LOC120568969 NA coding downstream 22232 33257270 ~ 33270528 (-)
LOC120568460 LOC101482682,LOC100703124,LOC102296331,LOC102790639,LOC103357352 coding downstream 87909 33202881 ~ 33204851 (-)
LOC120568453 LOC103364630 coding downstream 101291 33181456 ~ 33191469 (-)
si:ch211-284o19.8 NA coding downstream 316405 32967896 ~ 32976355 (-)
mettl17 mettl17 coding downstream 339806 32945384 ~ 32952954 (-)
grk7a grk7,LOC104920904,LOC102788793,LOC103356827 coding upstream 8618 33304779 ~ 33312730 (-)
fbxo36b LOC100702589,LOC104964148 coding upstream 25729 33321890 ~ 33325637 (-)
LOC120567979 LOC103356688,LOC105925287,LOC106536587,LOC108244514,LOC104948911 coding upstream 30045 33326206 ~ 33337752 (-)
zgc:110269 LOC104959814,LOC103356596,LOC100702321 coding upstream 42113 33338274 ~ 33347216 (-)
LOC120567983 LOC100700608,LOC103356522 coding upstream 50990 33347151 ~ 33355419 (-)
LOC120568465 NA non-coding downstream 116001 33172839 ~ 33176759 (-)
G119686 NA non-coding downstream 319757 32972675 ~ 32973003 (-)
LOC120568464 NA non-coding downstream 352600 32938701 ~ 32940160 (-)
G119593 NA non-coding downstream 531917 32760572 ~ 32760843 (-)
G119590 NA non-coding downstream 535108 32757210 ~ 32757652 (-)
G119852 NA non-coding upstream 38063 33334224 ~ 33334542 (-)
G119861 NA non-coding upstream 85593 33381754 ~ 33381998 (-)
G119881 NA non-coding upstream 203473 33499634 ~ 33499953 (-)
G119895 NA non-coding upstream 219632 33515793 ~ 33516158 (-)
G119896 NA non-coding upstream 221015 33517176 ~ 33518156 (-)
LOC120568437 NA other downstream 35823 33217190 ~ 33256937 (-)
zgc:66427 LOC103370245 other downstream 304201 32979206 ~ 32988559 (-)
G119631 LOC104961532,LOC101466547 other downstream 427486 32849719 ~ 32865274 (-)
LOC120567697 copa,LOC103137970 other downstream 460251 32828364 ~ 32832509 (-)
fcer1gl NA other downstream 527549 32760969 ~ 32765211 (-)
selenof selenof other upstream 125228 33421389 ~ 33433925 (-)
gfi1aa gfi1,LOC100698183,LOC101467858,LOC102203194,LOC102781835,LOC106958274 other upstream 348934 33645095 ~ 33649517 (-)
G119989 NA other upstream 358141 33654302 ~ 33659276 (-)
G120168 LOC105912833 other upstream 932465 34228626 ~ 34229050 (-)
G120230 NA other upstream 1104662 34400823 ~ 34404013 (-)

Expression


Co-expression Network