G119973


Basic Information

Item Value
gene id G119973
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 33600970 ~ 33611387 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU161584
GattaatgaaaaataattttatttttgactttCAGTACACAAAACATTAGCTACTGTAAATGGCAGCCACTTGCTTTGTTTCTCCCTTTGTGACAAAATCCAAAGTAGAGTGAGGCAGACGTGTTTTAgggttttaaattaaattactttCCCTTGTGACAAGACCCAGTTTACACTAACCAGAGTATTTAAAAGGTGCTCCAAGCGATGTCACGcggttttttaggctacaacatttttttgtcacatacagcaaacatctcactatccgtgagctgcctgtcccctgaacacactgtaaaaaactaaataaatcacagtctctgtagacagcccaggctccacaaatggcaacaaaaacaatctgcgccaacctgcaccacgaaacagagttccagccaataaccaacaagaaggattttggggtggggggggcgagCTAGTCTCGTTTTATTTGAAAATGCTTTGAACGTCAAGaggtaacgtcacccaacatcgcttagagcacctttaaagtgtTAAACACaaggtttttcctttttttaaaagaactCAAGTTTTCTTAGCTTCTCTTTTGGTCTTCGAAGTGAAAAAGTACtgtgtaaaaaaaaagagggaagggGTTTATCAGTTAAAAAAGTGTATTCCACTTTTATTATGTGCTAGGGAAGAACATTGTTATAAGTGAAAATAAAAGCCTTTTCCTCCACCTTCTGTTGACAGATGAGCTGGTGTTGGATGGGAAGCTCATTGTTGAGAAGAAACCAAAACCTCTTGGAAGTGTGGTCACGTGGGTCACAGTCTGCTTTGGGAGATTTTCGGGTGTATTTACTGTGATCTCTTCACTGAATATGCTTGGTCTCT

Function

GO:

id name namespace
GO:0043570 maintenance of DNA repeat elements biological_process
GO:0006259 DNA metabolic process biological_process

KEGG:

id description
ko03430 Mismatch repair
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU161584 True 864 lncRNA 0.40 2 33600970 33611387

Neighbor

gene id symbol gene type direction distance location
znf644a znf644,LOC103355709 coding downstream 23128 33561200 ~ 33577842 (-)
gtf2b gtf2b coding downstream 68258 33520706 ~ 33532712 (-)
LOC120567699 NA coding downstream 199647 33385763 ~ 33401323 (-)
sept2 sept2,LOC101486671,LOC102196852,LOC100702055,LOC102290758,LOC107693718,LOC107722571 coding downstream 220409 33366618 ~ 33380561 (-)
LOC120567983 LOC100700608,LOC103356522 coding downstream 245551 33347151 ~ 33355419 (-)
glmna glmn,LOC102782615 coding upstream 226 33611613 ~ 33622422 (-)
dipk1aa LOC104920940,LOC103355123,LOC100700149 coding upstream 53326 33664713 ~ 33679787 (-)
gadd45aa gadd45a,LOC105919244 coding upstream 247183 33858570 ~ 33861288 (-)
nsun4 nsun4 coding upstream 338209 33949596 ~ 33955044 (-)
pif1 pif1 coding upstream 346632 33958019 ~ 33976815 (-)
G119916 NA non-coding downstream 44958 33555584 ~ 33556012 (-)
G119896 NA non-coding downstream 82814 33517176 ~ 33518156 (-)
G119895 NA non-coding downstream 84812 33515793 ~ 33516158 (-)
G119881 NA non-coding downstream 101017 33499634 ~ 33499953 (-)
G119861 NA non-coding downstream 218972 33381754 ~ 33381998 (-)
G119982 NA non-coding upstream 24964 33636351 ~ 33684690 (-)
G119983 NA non-coding upstream 28225 33639612 ~ 33643648 (-)
G119990 NA non-coding upstream 47955 33659342 ~ 33662533 (-)
LOC120568796 NA non-coding upstream 104006 33715393 ~ 33718251 (-)
G120016 LOC105920460,LOC103479125,LOC106958286,LOC103149535,LOC106904251,LOC108244512,LOC106529836 non-coding upstream 126111 33737498 ~ 33767779 (-)
selenof selenof other downstream 167045 33421389 ~ 33433925 (-)
LOC120568437 NA other downstream 344033 33217190 ~ 33256937 (-)
zgc:66427 LOC103370245 other downstream 612411 32979206 ~ 32988559 (-)
G119631 LOC104961532,LOC101466547 other downstream 735696 32849719 ~ 32865274 (-)
LOC120567697 copa,LOC103137970 other downstream 768461 32828364 ~ 32832509 (-)
gfi1aa gfi1,LOC100698183,LOC101467858,LOC102203194,LOC102781835,LOC106958274 other upstream 33708 33645095 ~ 33649517 (-)
G119989 NA other upstream 42915 33654302 ~ 33659276 (-)
G120168 LOC105912833 other upstream 617239 34228626 ~ 34229050 (-)
G120230 NA other upstream 789436 34400823 ~ 34404013 (-)
LOC120568808 LOC103366832,LOC103395886,LOC104944844 other upstream 1175781 34787168 ~ 34792767 (-)

Expression


Co-expression Network