G119990


Basic Information

Item Value
gene id G119990
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 33659342 ~ 33662533 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU161608
tttaattagCATGAAgacatgtcccagagagcgtTTGAGTGCGTACATGtcaacccctaggttcgttttgcgccggaattgtacTTTTAAGTGAGGCAGTTTATTCTCAGCAAGTATATTCCACAGGGATCATCCTGTACGTCAGTGGACCTGACTCGCTGAACATTTTCCACCTGTAACGCTAGTGATATCATCAATGCTGCATCAATGACACAGAATATTAATGTATTTGATTTGTGAATGTTATTAACTCGTATTTCTCACTGAAAAGATCAGTTGTGGTAATTGTGCTGTATGAATATATTTTTGGATTTTATCTCAGTGCCATAGACATCATGCTGAAATCATCTATGAATGTTTACCACCGGTGAAGGTGGAGATCTTCATCAACTCTTGCGGCCACATTTGAATGCTGCATAAAGAGTATTTTCCATGATCCCTTCCAGACATTTGTTGTTGTGAAGTTGCTGTTGACAACCTGACTTGTTAATCACTTTAAATGCATTTCAAAACAGACGTGATCTGTAAAGCATGTCAAGCTTGTGGtcaatgctgtttgaattttgaaaatgtaaaaaaaaaagtttacttaTTGAAGAGCCCAGCATGATTTTGCACAATTAAACACCATACCGCTTCACTGTAACCTGTTAAATCTGTTCAGGTCCATTGTACACTACACCACACTGAGGCATTATCATTCTTCAGTTATTCATGTGGATTCAAGATAATCACTGTTAAAAGCACATACAACTCATTCAAAAAAGTATTGGCGGAAAGACAAAAGCTTGGGTTTGTAATAAATTTATTTGTCTGTGATGTGTGTTGGGTTTTTGCAGCGGAACACCTAACCGTCCCCTTCTTCTTGCTCTTGTGCTCGTAAGAAGCTGGCCTTTTTCTGGGCGACGCGATCCTTCCTCTGTGCCAGAGATAACTTGGCGCGATTCCACCTCTTCTTCTTGACGTCTTTTGTGGCTTTCTTTTCGTGGGCGGGGTTTGCTCGGATGCTGGCGTGTGCTTTCTTGTACATTTCTTCGACCTGTAAGAACAAAAACGACACGTGGTAATGCGTCACATCTAGGGGCATTTCACTCTGTGCATGAGGGTTCGTCTCGCTTCTCTCAGCCCCGTCTTGAAAGGACAGTAAACATCAGCTAATGCAAATGAAGGACCAACTACATTTTGCTCAGCGTGCTTTGTATCATCATCAAGAAGCAGAGAACCAGCAAACACAGCAGTGAAATCACTGACAAACTAAACCATTGTAGTAAGGCTCATGTAAATATGCACAAATGATGCAGCTGCAGAGGAGACACGACATTTGAGCACTGGGCTTCAGGGTGGTTTGTGGACAGTTAAGTGCGGGTCCACAGATGGTACCGTTTACTGTTGCAATTGTCTTGTACATACTGATAAGACCGTATGAGATATAACATATTACATGCACACGCAGGCTGACTGGCCACCCACCCACACCTCTCTGCTCagctatatctttacatagtaAAATAGTTTGTTTATTGCCATTTTAATGTCTTGAATATCAATTACAGCCCCTTTGAACTTGGTCATTAAAGAAGTATGATGAAAATATGTACTGAGCAACATTttacaatttcaaaataaacttgTCAGTACACTCTGGTGGACAAATAATGTAATGGAGGCCCGTTTGTAATAACCTCAAACATACTGTAGGCATTTATGTACTGCTTATTAAGCAAACTATACgccaatatatagatatatctcAATCAACTAATATCGGTCAGCCACAAAACGTATTTTACATGACTTCCAGTTAACCGTTCTGTAAATATTTCTCCTGTCAATGCATGTCCATGTCCTGACTACACGTACCAATCActtttatattaaaaacaattacTTGACGCAGAGTGATGTGCATCAAATGCAAAACATGAATCCATGACTGCTCCATGACTTCATTACCTCCTGTCACTGAACACTCTCCTCAGAGGATGTGTATCACAGGACTCCCAAAGGATGGTTAAGTGCAGCAATTTCATTCGGGACACTGGCATAAATATAAATTAAGAGAATTTTATATTACGCAAATCTGGCCGAAAGAATGGACGATGAGGTTGCACGTCTAACTATGGCCAGAGGTGCTTTACTGCAGCCTGAATGTGTCGCGTGACGTCTTTGTTCGTACCGTGTCTGGCGTGACTCCGTTCTTGATGAAGCGAGAGAACTGTTTCTTGTAGgcgtcctcgtcctcctccaTCAGGTAGGACATGTAGTCGGCCACGTTCATGCCCATGATGTGTTTCCGATGCACCTCGGCGTTGAACTCTTTACTCTCTGTGTCGTAACCGGGGAAACGTTTCAGGCTAGGAACAAGGAAGGGCAGAAAGCACATTAGGATTAGTGACCGAGTCAAGTCAGCATTTCCAAATACTAACTCTCAGCTGACTAGCAACTGACTTTCTGCACTTTTCTAATGTTTTGTTCTTCAAAATTGTGGTTTCTAGTAATTTGTCATCCttcctgcagtgctctgctaaaATAATCACACCGAGACAATGACGTGGTGTTTGCTTTGGTTCGTCTCGCTTCTCTCAGCCCCGTCTTGAAAGGACAGTAAACATCAGCTAATGCAAATGAAGGACCAACTACATTTTGCTCAGCGTGCTTTGTATCATCATCAAGAAGCAGAGGAGAACCAGCAACCACAAACTGGACCAGTTTGTCATCACCCCCACAGAGCAAAAAATTATGATTGGCTTTAAGCAAGAGGAAAAACGTCTGAAAAATACACCTAATATCATCTCTCTCTAAAATGTTACTTCTGAGAGAGAAGTGACTTGTATTGGTGCAATCACATCATGCTTAGTTTGGAAGTAAAACTCAAGCACACATTTTGGTTGTTGCAGAACTTTGAATCCTAACTTGAAACCACACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161608 True 2927 lncRNA 0.41 2 33659342 33662533

Neighbor

gene id symbol gene type direction distance location
glmna glmn,LOC102782615 coding downstream 36920 33611613 ~ 33622422 (-)
znf644a znf644,LOC103355709 coding downstream 81500 33561200 ~ 33577842 (-)
gtf2b gtf2b coding downstream 126630 33520706 ~ 33532712 (-)
LOC120567699 NA coding downstream 258019 33385763 ~ 33401323 (-)
sept2 sept2,LOC101486671,LOC102196852,LOC100702055,LOC102290758,LOC107693718,LOC107722571 coding downstream 278781 33366618 ~ 33380561 (-)
dipk1aa LOC104920940,LOC103355123,LOC100700149 coding upstream 2180 33664713 ~ 33679787 (-)
gadd45aa gadd45a,LOC105919244 coding upstream 196037 33858570 ~ 33861288 (-)
nsun4 nsun4 coding upstream 287063 33949596 ~ 33955044 (-)
pif1 pif1 coding upstream 295486 33958019 ~ 33976815 (-)
LOC120567625 LOC104964778,LOC107104388,LOC103353835,LOC102303690,LOC102777524 coding upstream 346358 34008891 ~ 34034308 (-)
G119983 NA non-coding downstream 15694 33639612 ~ 33643648 (-)
G119973 NA non-coding downstream 47955 33600970 ~ 33611387 (-)
G119916 NA non-coding downstream 103330 33555584 ~ 33556012 (-)
G119896 NA non-coding downstream 141186 33517176 ~ 33518156 (-)
G119895 NA non-coding downstream 143184 33515793 ~ 33516158 (-)
LOC120568796 NA non-coding upstream 52860 33715393 ~ 33718251 (-)
G120016 LOC105920460,LOC103479125,LOC106958286,LOC103149535,LOC106904251,LOC108244512,LOC106529836 non-coding upstream 74965 33737498 ~ 33767779 (-)
G120034 NA non-coding upstream 145987 33808520 ~ 33823583 (-)
G120039 NA non-coding upstream 168270 33830803 ~ 33853674 (-)
G120052 NA non-coding upstream 285987 33948520 ~ 33949194 (-)
G119989 NA other downstream 66 33654302 ~ 33659276 (-)
gfi1aa gfi1,LOC100698183,LOC101467858,LOC102203194,LOC102781835,LOC106958274 other downstream 9825 33645095 ~ 33649517 (-)
selenof selenof other downstream 225417 33421389 ~ 33433925 (-)
LOC120568437 NA other downstream 402405 33217190 ~ 33256937 (-)
zgc:66427 LOC103370245 other downstream 670783 32979206 ~ 32988559 (-)
G120168 LOC105912833 other upstream 566093 34228626 ~ 34229050 (-)
G120230 NA other upstream 738290 34400823 ~ 34404013 (-)
LOC120568808 LOC103366832,LOC103395886,LOC104944844 other upstream 1124635 34787168 ~ 34792767 (-)
G120390 NA other upstream 1233046 34895579 ~ 34895913 (-)
LOC120567704 NA other upstream 1348575 35011108 ~ 35014245 (-)

Expression


Co-expression Network