LOC120568585 (LOC108244495)


Basic Information

Item Value
gene id LOC120568585
gene name LOC108244495
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 33955166 ~ 33957504 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU161681
CGTGAACGACCCCACGTCCTCGAAAACAGTGCTGCTGAGGAGCTTGGACTTCTGTCCTCTGTGTGGGTTTTGGGCAATTTTCAGAGCCGCAATCATGGTTTTCGAGAGGAAGATGATCACGTACGACGACCCCGAAGAGGAGGAGGAAAAtgctgaggaggaagaggaggaagaagagcaaGACATGGTGGACCCTCTAGAAACAATACGAGCCAAGTGTGAGCAGACTGAACACTGTGTGCACACCAAGGAGCGTCTGGAGACATGTGAAGCCCGAGTCGGCTCCCGATCCAACACTGCTGAAGAATGCACAGAAGAACTCTTCGACTTCCTGCATGCACGGGAccattgtGTGGCGCACAAGCTGTTCCACCATGTGAAATAACCTGCCTGCTCAGCTCCCTCCACTTGCAGCTGTAGACTATTTAACTGCTAAAATTTGTAAAATAATCAGGACTATTCTGTTCTTCTGTGTATTAGTGTAAATGAAGTGTATTGGGTTCCTTGACTAAATACATGCCACTTTTCCTGTATACTGTGCATACTTGTGTTGACTGGGTCAGGAGCAGTATGTAGAATATGAGTCACTGCTTGGATATGTTAAGAAGTGAATCATAGATGTTGAAGGATGTGCAACGAAGGGAATCAAACTATCAATTCTCACTGGTCAGTTCAGAAGCAAGAGCAAACATGCTGCTCTGGCAATGCAGTTTACCTCAGGTTTGGTCATGGACTCCTCACTAACTCGAAAATAAAGGGTTTTTTGGTGTTCAGTAATTCCATGCATTGGATTCTTCTGTGTTACAATTGAATGGGATTGTCTGACTGTATATTCAGTACAAGCATTTTTAAGCTCTGAAGGCTGTCTTGTGAGTTTgatgtacactaccgg
>XM_039816185.1
TCTCGTCGTTTCCTGCGCGTGAACGACCCCACGTCCTCGAAAACAGTGCTGCTGAGGAGCTTGGACTTCTGTCCTCTGTGTGGGTTTTGGGCAATTTTCAGAGCCGCAATCATGGTTTTCGAGAGGAAGATGATCACGTACGACGACCCCGAAGAGGAGGAGGAAAAtgctgaggaggaagaggaggaagaagagcaaGACATGGTGGACCCTCTAGAAACAATACGAGCCAAGTGTGAGCAGACTGAACACTGTGTGCACACCAAGGAGCGTCTGGAGACATGTGAAGCCCGAGTCGGCTCCCGATCCAACACTGCTGAAGAATGCACAGAAGAACTCTTCGACTTCCTGCATGCACGGGAccattgtGTGGCGCACAAGCTGTTCCACCATGTGAAATAACCTGCCTGCTCAGCTCCCTCCACTTGCAGCTGTAGACTATTTAACTGCTAAAATTTGTAAAATAATCAGGACTATTCTGTTCTTCTGTGTATTAGTGTAAATGAAGTGTATTGGGTTCCTTGACTAAATACATGCCACTTTTCCTGTATACTGTGCATACTTGTGTTGACTGGGTCAGGAGCAGTATGTAGAATATGAGTCACTGCTTGGATATGTTAAGAAGTGAATCATAGATGTTGAAGGATGTGCAACGAAGGGAATCAAACTATCAATTCTCACTGGTCAGTTCAGAAGCAAGAGCAAACATGCTGCTCTGGCAATGCAGTTTACCTCAGGTTTGGTCATGGACTCCTCACTAACTCGAAAATAAAGGGTTTTTTGGTGTTCAGTAA

Function

NR:

description
PREDICTED: cytochrome b-c1 complex subunit 6, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161681 True 892 TUCP 0.45 4 33955183 33957504
XM_039816185.1 False 794 mRNA 0.47 4 33955166 33957389

Neighbor

gene id symbol gene type direction distance location
dmbx1a dmbx1,LOC102206215,LOC102778954,LOC100697381,LOC103354234 coding upstream 16388 33929067 ~ 33938778 (+)
wls wls coding upstream 145490 33768879 ~ 33809676 (+)
scinlb LOC106958286,LOC106904251,LOC103149535 coding upstream 187387 33743259 ~ 33767779 (+)
ccdc18 NA coding upstream 225526 33701632 ~ 33729640 (+)
mtf2 mtf2 coding upstream 256380 33682701 ~ 33698786 (+)
ptger4c LOC104920997,LOC103353922,LOC100696844 coding downstream 47391 34004895 ~ 34007251 (+)
nr2f6a LOC104920957,LOC101167397,LOC106911939 coding downstream 286334 34243838 ~ 34253143 (+)
angptl4 LOC103369125 coding downstream 467795 34425299 ~ 34432504 (+)
mast3a LOC104920969,LOC103357775 coding downstream 573051 34530555 ~ 34565654 (+)
ifi30 NA coding downstream 661048 34618552 ~ 34622369 (+)
LOC120569017 NA non-coding upstream 84382 33867395 ~ 33870784 (+)
G119963 NA non-coding upstream 86480 33868386 ~ 33868686 (+)
G119961 NA non-coding upstream 87166 33867769 ~ 33868000 (+)
LOC120569016 NA non-coding upstream 88170 33861438 ~ 33866996 (+)
G119922 NA non-coding upstream 356509 33597873 ~ 33598657 (+)
G120058 pif1 non-coding downstream 18324 33975828 ~ 33976887 (+)
G120059 NA non-coding downstream 25493 33982997 ~ 33983403 (+)
G120062 NA non-coding downstream 29928 33987432 ~ 33987907 (+)
G120069 NA non-coding downstream 55174 34012678 ~ 34012883 (+)
G120064 NA non-coding downstream 85048 34042552 ~ 34111347 (+)
G119957 gadd45a,LOC106598934,LOC106568974 other upstream 95319 33858542 ~ 33859847 (+)
gng12a gng12,LOC104920945,LOC104956611,LOC103354642 other upstream 103229 33810968 ~ 33851937 (+)
pkn2a pkn2 other upstream 439742 33477336 ~ 33515424 (+)
G119769 grk7,LOC106528614,LOC104920904 other upstream 647302 33304822 ~ 33307864 (+)
LOC120568463 NA other upstream 789066 33163916 ~ 33166100 (+)
mrpl34 NA other downstream 206576 34164080 ~ 34165852 (+)
LOC120568953 dda1,LOC105024194,LOC106568965,LOC104920954 other downstream 209472 34166976 ~ 34172309 (+)
G120200 NA other downstream 359644 34317148 ~ 34317766 (+)
rps28 NA other downstream 443244 34400748 ~ 34404001 (+)
G120249 rps15,rig,rs15 other downstream 496218 34453722 ~ 34457611 (+)

Expression


Co-expression Network