G120393


Basic Information

Item Value
gene id G120393
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 34905146 ~ 34905390 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU162122
attaggacaatgcacattaatcaacatttctataaatgcgccagtgttagccagtcggctaattttcaactgtagtcctagttgcatgcatgtctttagggtgggaagaaaccggagcatccggaggaaacccacgcaagcacggggagaacatgcaaactccacacagaaaggcctgggttcaaacccagaaccttcttgctgtgaggcagaagtgctaaccactgagccaccgtgctgccttC

Function

GO:

id name namespace
GO:0005576 extracellular region cellular_component

KEGG:

id description
ko04310 Wnt signaling pathway
ko05217 Basal cell carcinoma
ko05224 Breast cancer

RNA

RNA id representative length rna type GC content exon number start site end site
TU162122 True 245 lncRNA 0.49 1 34905146 34905390

Neighbor

gene id symbol gene type direction distance location
LOC120568812 LOC102310619,LOC100692846,LOC108280567,LOC105903927,LOC106524909,LOC108427173 coding upstream 80325 34809892 ~ 34824821 (+)
trnam-cau_26 NA coding upstream 128997 34776078 ~ 34776149 (+)
trnam-cau_25 NA coding upstream 132925 34772150 ~ 34772221 (+)
trnar-ccu_3 NA coding upstream 133000 34772074 ~ 34772146 (+)
LOC120568807 LOC100693392,LOC103352799,LOC101161005,LOC103131440 coding upstream 138815 34743728 ~ 34766331 (+)
LOC120569116 LOC107667722 coding downstream 260268 35165658 ~ 35168716 (+)
LOC120567912 NA coding downstream 356168 35261558 ~ 35262902 (+)
LOC120567707 LOC106910133,LOC107834262,LOC106939220,LOC107373952,LOC104944801 coding downstream 526289 35431679 ~ 35443813 (+)
pold3 pold3,LOC107703443 coding downstream 1543647 36449037 ~ 36463662 (+)
LOC120567713 LOC107092464,LOC101065262 coding downstream 1660371 36565761 ~ 36583870 (+)
G120391 NA non-coding upstream 8013 34896535 ~ 34897133 (+)
LOC120568810 NA non-coding upstream 107299 34792758 ~ 34797847 (+)
LOC120568809 NA non-coding upstream 133469 34768101 ~ 34771677 (+)
G120295 NA non-coding upstream 286934 34617774 ~ 34618212 (+)
G120291 NA non-coding upstream 336381 34568185 ~ 34568765 (+)
LOC120568917 NA non-coding downstream 47935 34953325 ~ 34954407 (+)
G120397 NA non-coding downstream 59756 34965146 ~ 34965540 (+)
G120410 NA non-coding downstream 100204 35005594 ~ 35005806 (+)
G120411 NA non-coding downstream 104791 35010181 ~ 35011042 (+)
G120483 NA non-coding downstream 299722 35205112 ~ 35205709 (+)
pde4ca pde4c,LOC101063915,LOC100693394,LOC102791393,LOC102313416 other upstream 213526 34624276 ~ 34691620 (+)
pik3r2 pik3r2,LOC102792547,LOC100693657 other upstream 297390 34569394 ~ 34607756 (+)
G120249 rps15,rig,rs15 other upstream 447535 34453722 ~ 34457611 (+)
rps28 NA other upstream 501145 34400748 ~ 34404001 (+)
G120200 NA other upstream 587380 34317148 ~ 34317766 (+)
LOC120568940 NA other downstream 689488 35594878 ~ 35642033 (+)
G120716 NA other downstream 1499850 36405240 ~ 36405773 (+)
G120717 NA other downstream 1500731 36406121 ~ 36406689 (+)
LOC120568208 LOC103361715,LOC100701557,LOC100700197,LOC101469035,LOC102215562,LOC102289753 other downstream 1974528 36879918 ~ 37087443 (+)
G120914 LOC103396775 other downstream 2397504 37302894 ~ 37306014 (+)

Expression


Co-expression Network