LOC120568837


Basic Information

Item Value
gene id LOC120568837
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 35559341 ~ 35560910 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU162256
CCACACtattcttttgttttgtgttgttttaaataaatttatGTTAATCTTTGTAAACCTGAGTTGCATCCTCCTTCTTTGTTGCGGCCTGAGAGCCGGGGTCGTAACAAATTGGGGGCTCGTCTGTTTTTGAATTCTGTGGCATTGATGGCCAAACTGTGGGATGGGTCGAGGAGCTGGTGCTGGCAGCTGTAGAGCTGCCAGCTATTCCGAAAGCTCTGCGGGACCTGGGGCAATACGCTCGGGCAAACAGGGTCAGCACGGTGGCTCTGACTGGTGACCAGGTGGCCACAGTGAGGTCAACTTTTCAGTGCCTTATATGCAGAGATGTGATGGAAAACCCAGTGGTGGCACCATGCTGCCGCAGCCTCGTTGGGTGCCGGGTCTGCGTGGAGCAGTGGACAACCAACTCGCTGCACTGCCCAAAATGCAGGGATGACAGTTTTCAAGAAAAGAAATTTTAGCTTACAGGGATGGGGGAGgttgttactgtttttgaagGACATCATAAGAAGTTAGGGGATTGTTGGTGTAGTTCGTTTTTATTTTAGGAGGGTGGTTGTTGGGGGGCCTGTTAAGTTGAGTTATG
>XR_005640794.1
CTAGTGTCGGTGCTTGCGCCTGCCACACtattcttttgttttgtgttgttttaaataaatttatGTTAATCTTTGTAAACCTGAGTTGCATCCTCCTTCTTTGTTGCGGCCTGAGAGCCGGGGTCGTAACAAATTGGGGGCTCGTCTGTTTTTGAATTCTGTGGCATTGATGGCCAAACTGTGGGATGGGTCGAGGAGCTGGTGCTGGCAGCTGTAGAGCTGCCAGCTATTCCGAAAGCTCTGCGGGACCTGGGGCAATACGCTCGGGCAAACAGGGTCAGCACGGTGGCTCTGACTGGTGACCAGGTGGCCACAGTGAGGTCAACTTTTCAGTGCCTTATATGCAGAGATGTGATGGAAAACCCAGTGGTGGCACCATGCTGCCGCAGCCTCGTTGGGTGCCGGGTCTGCGTGGAGCAGTGGACAACCAACTCGCTGCACTGCCCAAAATGCAGGGATGACAGTTTTCAAGAAAAGAAATTTTAGCTTACAGGGATGGGGGAGgttgttactgtttttgaagGACATCATAAGAAGTTAGGGGATTGTTGGTGTAGTTCGTTTTTATTTTAGGAGGGTGGTTGTTGGGGGGCCTGTTAAGTTGAGTTATGTTCATCtgttatgttattttatgtaaataataaattgtaaaaaaaaattctgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162256 False 589 lncRNA 0.49 3 35559363 35560857
XR_005640794.1 True 664 lncRNA 0.47 3 35559341 35560910

Neighbor

gene id symbol gene type direction distance location
LOC120567707 LOC106910133,LOC107834262,LOC106939220,LOC107373952,LOC104944801 coding upstream 115528 35431679 ~ 35443813 (+)
LOC120567912 NA coding upstream 296439 35261558 ~ 35262902 (+)
LOC120569116 LOC107667722 coding upstream 390625 35165658 ~ 35168716 (+)
LOC120568812 LOC102310619,LOC100692846,LOC108280567,LOC105903927,LOC106524909,LOC108427173 coding upstream 734520 34809892 ~ 34824821 (+)
trnam-cau_26 NA coding upstream 783192 34776078 ~ 34776149 (+)
pold3 pold3,LOC107703443 coding downstream 888127 36449037 ~ 36463662 (+)
LOC120567713 LOC107092464,LOC101065262 coding downstream 1004851 36565761 ~ 36583870 (+)
LOC120568503 LOC100700741,LOC103361717,LOC101470268 coding downstream 1027744 36588654 ~ 36620596 (+)
LOC120568504 LOC103361716 coding downstream 1063167 36624077 ~ 36710812 (+)
LOC120568506 NA coding downstream 1176238 36737148 ~ 36747668 (+)
G120498 NA non-coding upstream 220337 35338739 ~ 35339004 (+)
G120497 NA non-coding upstream 239120 35319921 ~ 35320221 (+)
G120483 NA non-coding upstream 353632 35205112 ~ 35205709 (+)
G120411 NA non-coding upstream 548299 35010181 ~ 35011042 (+)
G120410 NA non-coding upstream 553535 35005594 ~ 35005806 (+)
G120526 NA non-coding downstream 87550 35648460 ~ 35648739 (+)
LOC120567666 NA non-coding downstream 95039 35655949 ~ 35659245 (+)
G120549 NA non-coding downstream 104259 35665169 ~ 35665393 (+)
G120552 NA non-coding downstream 117682 35678592 ~ 35678966 (+)
G120568 NA non-coding downstream 198783 35759693 ~ 35760228 (+)
pde4ca pde4c,LOC101063915,LOC100693394,LOC102791393,LOC102313416 other upstream 867721 34624276 ~ 34691620 (+)
pik3r2 pik3r2,LOC102792547,LOC100693657 other upstream 951585 34569394 ~ 34607756 (+)
G120249 rps15,rig,rs15 other upstream 1101730 34453722 ~ 34457611 (+)
rps28 NA other upstream 1155340 34400748 ~ 34404001 (+)
G120200 NA other upstream 1241575 34317148 ~ 34317766 (+)
LOC120568940 NA other downstream 33968 35594878 ~ 35642033 (+)
G120716 NA other downstream 844330 36405240 ~ 36405773 (+)
G120717 NA other downstream 845211 36406121 ~ 36406689 (+)
LOC120568208 LOC103361715,LOC100701557,LOC100700197,LOC101469035,LOC102215562,LOC102289753 other downstream 1319008 36879918 ~ 37087443 (+)
G120914 LOC103396775 other downstream 1741984 37302894 ~ 37306014 (+)

Expression


Co-expression Network