G120613


Basic Information

Item Value
gene id G120613
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 35889886 ~ 35890255 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU162372
ccggccgcggctgtcgatacgttccctgttttttccaatgtttccgtcaggtccgcgtcatataaaaactccaaacaccgaccacacgtaaagtcaccataaacttcattcacgccatatactcactcacaacaacacaaattgactgcgctcaccaacaacacctcatcacttccggtatgtggtacattccctttccgtgaagaatctgtcatttgtaaatttgtttcgggacaggtaaaagtgttttgcatcttgttaatttgttttctaaaatgtaaatttgttttcgaaaatgtaaatttgttttctaaaatgttattttgttttccaaaatgtaaatttgttttctaaaacgtaaatttgtttt

Function

GO:

id name namespace
GO:0042559 pteridine-containing compound biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162372 True 370 lncRNA 0.36 1 35889886 35890255

Neighbor

gene id symbol gene type direction distance location
LOC120567707 LOC106910133,LOC107834262,LOC106939220,LOC107373952,LOC104944801 coding upstream 446073 35431679 ~ 35443813 (+)
LOC120567912 NA coding upstream 626984 35261558 ~ 35262902 (+)
LOC120569116 LOC107667722 coding upstream 721170 35165658 ~ 35168716 (+)
LOC120568812 LOC102310619,LOC100692846,LOC108280567,LOC105903927,LOC106524909,LOC108427173 coding upstream 1065065 34809892 ~ 34824821 (+)
trnam-cau_26 NA coding upstream 1113737 34776078 ~ 34776149 (+)
pold3 pold3,LOC107703443 coding downstream 558782 36449037 ~ 36463662 (+)
LOC120567713 LOC107092464,LOC101065262 coding downstream 675506 36565761 ~ 36583870 (+)
LOC120568503 LOC100700741,LOC103361717,LOC101470268 coding downstream 698399 36588654 ~ 36620596 (+)
LOC120568504 LOC103361716 coding downstream 733822 36624077 ~ 36710812 (+)
LOC120568506 NA coding downstream 846893 36737148 ~ 36747668 (+)
G120611 NA non-coding upstream 1001 35888646 ~ 35888885 (+)
LOC120568242 LOC103358295 non-coding upstream 59629 35822425 ~ 35830257 (+)
G120582 NA non-coding upstream 62016 35796182 ~ 35827870 (+)
G120575 NA non-coding upstream 113663 35775960 ~ 35776223 (+)
G120568 NA non-coding upstream 129658 35759693 ~ 35760228 (+)
G120675 NA non-coding downstream 298078 36188333 ~ 36188558 (+)
LOC120568724 LOC107386814 non-coding downstream 314296 36204551 ~ 36206241 (+)
G120678 NA non-coding downstream 331164 36221419 ~ 36221770 (+)
trnal-uaa_3 NA non-coding downstream 337569 36227824 ~ 36227906 (+)
trnal-uaa_4 NA non-coding downstream 338200 36228455 ~ 36228537 (+)
LOC120568940 NA other upstream 247853 35594878 ~ 35642033 (+)
pde4ca pde4c,LOC101063915,LOC100693394,LOC102791393,LOC102313416 other upstream 1198266 34624276 ~ 34691620 (+)
pik3r2 pik3r2,LOC102792547,LOC100693657 other upstream 1282130 34569394 ~ 34607756 (+)
G120249 rps15,rig,rs15 other upstream 1432275 34453722 ~ 34457611 (+)
rps28 NA other upstream 1485885 34400748 ~ 34404001 (+)
G120716 NA other downstream 514985 36405240 ~ 36405773 (+)
G120717 NA other downstream 515866 36406121 ~ 36406689 (+)
LOC120568208 LOC103361715,LOC100701557,LOC100700197,LOC101469035,LOC102215562,LOC102289753 other downstream 989663 36879918 ~ 37087443 (+)
G120914 LOC103396775 other downstream 1412639 37302894 ~ 37306014 (+)
LOC120568367 LOC103371210,LOC101487706,LOC100534480,LOC102208811,LOC102309261,LOC104937382,LOC106522909 other downstream 2099310 37989565 ~ 38019068 (+)

Expression


Co-expression Network