G120617


Basic Information

Item Value
gene id G120617
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 35898253 ~ 35898958 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU162376
TAGTGTGATTAATATGATTTTCTATTGCATTTATGGTTTTTGAAAAGTATGATAAATCACGTGTAACCATTcctcccaacatttacatacaccaaCACATTAGGGTGACTGGAGGAAAAGACGGGTGATGCGTTCACTACTTTCCATATCAATGAGAAAATGGTGGTTGGTATACGAATGCTACTAAATTGGGGCTAATTGGGGTTTCGTACCTTATGTGGTTCCTCATGACCACACAAACTCAACTGATAGAATATTGATAAAGAAAGTAAATTATTCCTAAACagcaatattgttaatattgaaCAAAGTTAAGTATAAAGACCTAGGCCATTTTGTTGTGTGCTTTATAACTCAGGAAAAGTTCCTTGTGgatcttttattacattgaggtaatttcactttccacattgacgacacacagacaccacatttGACATTTGAAAGATTATCTAATAGATGCATTTTCTACTAAAGTATGACTTGGTTTAGTTAAGAAATGTATGCGTGATGTAGGTTATAATGATTTTTGTTCACTATTTCTTCGCTCACAGAAATAAGCTATTTCCAGTGAAACCACACACATAAGAATAACTGAATTTTATTTGTGCTCTGACAGCACTTAATGATGTTAGAGACAAGGAGGGGTCAGTTTTATTCTGATTCTTCTCAAACTTTCACTCTGTGAGAGCTTTGATAATTGCAC

Function

GO: NA

KEGG:

id description
ko00140 Steroid hormone biosynthesis
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU162376 True 706 lncRNA 0.34 1 35898253 35898958

Neighbor

gene id symbol gene type direction distance location
tyw3 NA coding downstream 62223 35826950 ~ 35836030 (-)
LOC120568240 plppr5,LOC104933489,LOC101073565,LOC102211483 coding downstream 89186 35791949 ~ 35809067 (-)
LOC120568237 NA coding downstream 175334 35719998 ~ 35722919 (-)
LOC120567708 NA coding downstream 440048 35456865 ~ 35458205 (-)
LOC120568905 NA coding downstream 452673 35444236 ~ 35445580 (-)
LOC120568882 NA coding upstream 12629 35911587 ~ 35914279 (-)
LOC120569092 NA coding upstream 29672 35928630 ~ 35933752 (-)
LOC120567710 NA coding upstream 63633 35962591 ~ 35964054 (-)
LOC120568723 LOC103361715,LOC100701557 coding upstream 244329 36143287 ~ 36345526 (-)
LOC120567712 LOC107092464,LOC103396797,LOC102797029,LOC102291799 coding upstream 566654 36465612 ~ 36481320 (-)
LOC120568243 NA non-coding downstream 54400 35839861 ~ 35843853 (-)
LOC120568239 NA non-coding downstream 119829 35771059 ~ 35778424 (-)
LOC120568238 NA non-coding downstream 156899 35739683 ~ 35741354 (-)
G120559 NA non-coding downstream 207037 35685487 ~ 35691216 (-)
LOC120568941 NA non-coding downstream 244922 35650694 ~ 35653331 (-)
G120623 NA non-coding upstream 4003 35902961 ~ 35903223 (-)
G120631 NA non-coding upstream 19921 35918879 ~ 35919159 (-)
G120664 NA non-coding upstream 148506 36047464 ~ 36047706 (-)
G120665 NA non-coding upstream 191867 36090825 ~ 36091343 (-)
G120691 NA non-coding upstream 289921 36188879 ~ 36189127 (-)
LOC120567705 NA other downstream 735272 35161809 ~ 35162981 (-)
LOC120568374 NA other downstream 828466 35058781 ~ 35069787 (-)
LOC120567704 NA other downstream 884008 35011108 ~ 35014245 (-)
G120390 NA other downstream 1002340 34895579 ~ 34895913 (-)
LOC120568808 LOC103366832,LOC103395886,LOC104944844 other downstream 1105486 34787168 ~ 34792767 (-)
LOC120567714 NA other upstream 810337 36709295 ~ 36737250 (-)
trnal-uaa_10 NA other upstream 1100859 36999817 ~ 36999899 (-)
trnal-caa_5 NA other upstream 1105002 37003960 ~ 37004042 (-)
trnal-uaa_11 NA other upstream 1105643 37004601 ~ 37004683 (-)
trnal-caa_6 NA other upstream 1139553 37038511 ~ 37038593 (-)

Expression


Co-expression Network