G120701



Basic Information


Item Value
gene id G120701
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 36213917 ~ 36214154 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU162464
cctttattgtgttatatatcttttttgtgcacgttataggtttacaaagtgaaaaagcccaaagtccccccccaaagtgacttaccatctccaacagaaaacactgttcaccaactgctccaaacagctctattgtagtccagcctttacttcagagacaaacgtggtcactttgtaacacacgttataatgctcgcctagctgctagcatggcacgccctcatactctgcttctgac

Function


NR:

description
PREDICTED: centromere protein F-like

GO: NA

KEGG:

id description
ko03020 RNA polymerase
ko03040 Spliceosome

RNA


RNA id representative length rna type GC content exon number start site end site
TU162464 True 238 lncRNA 0.44 1 36213917 36214154

Neighbor


gene id symbol gene type direction distance location
LOC120567710 NA coding downstream 249863 35962591 ~ 35964054 (-)
LOC120569092 NA coding downstream 280165 35928630 ~ 35933752 (-)
LOC120568882 NA coding downstream 299638 35911587 ~ 35914279 (-)
tyw3 NA coding downstream 377887 35826950 ~ 35836030 (-)
LOC120568240 plppr5,LOC104933489,LOC101073565,LOC102211483 coding downstream 404850 35791949 ~ 35809067 (-)
LOC120567712 LOC107092464,LOC103396797,LOC102797029,LOC102291799 coding upstream 251458 36465612 ~ 36481320 (-)
LOC120567636 LOC108232809,LOC102291799 coding upstream 287647 36501801 ~ 36560647 (-)
LOC120568634 NA coding upstream 950694 37164848 ~ 37204970 (-)
LOC120568299 itgb1 coding upstream 1082950 37297104 ~ 37331422 (-)
LOC120568250 LOC103366788 coding upstream 1124905 37339059 ~ 37442761 (-)
G120691 NA non-coding downstream 24790 36188879 ~ 36189127 (-)
G120665 NA non-coding downstream 122574 36090825 ~ 36091343 (-)
G120664 NA non-coding downstream 166211 36047464 ~ 36047706 (-)
G120631 NA non-coding downstream 294758 35918879 ~ 35919159 (-)
G120623 NA non-coding downstream 310694 35902961 ~ 35903223 (-)
G120707 LOC106533545 non-coding upstream 160344 36374498 ~ 36374785 (-)
G120715 NA non-coding upstream 190403 36404557 ~ 36404783 (-)
G120748 NA non-coding upstream 353707 36567861 ~ 36568187 (-)
G120762 NA non-coding upstream 405682 36619836 ~ 36622411 (-)
G120775 NA non-coding upstream 489982 36704136 ~ 36705635 (-)
LOC120567705 NA other downstream 1050936 35161809 ~ 35162981 (-)
LOC120568374 NA other downstream 1144130 35058781 ~ 35069787 (-)
LOC120567704 NA other downstream 1199672 35011108 ~ 35014245 (-)
G120390 NA other downstream 1318004 34895579 ~ 34895913 (-)
LOC120568808 LOC103366832,LOC103395886,LOC104944844 other downstream 1421150 34787168 ~ 34792767 (-)
LOC120567714 NA other upstream 495141 36709295 ~ 36737250 (-)
trnal-uaa_10 NA other upstream 785663 36999817 ~ 36999899 (-)
trnal-caa_5 NA other upstream 789806 37003960 ~ 37004042 (-)
trnal-uaa_11 NA other upstream 790447 37004601 ~ 37004683 (-)
trnal-caa_6 NA other upstream 824357 37038511 ~ 37038593 (-)

Expression



Co-expression Network