LOC120568212


Basic Information

Item Value
gene id LOC120568212
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 36863793 ~ 36866140 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU162604
agagacgttAAGTGAACGGACTTTGTGAGGTTTAGTAGGTTGTAGAAGGACATTGTTATCCATTACTGAGGCTGACAACCAGTTATGCTGTGTTTTGGCATATTGAAATCGACAAGAGTGACTCCCCTCATCCGCTCCATCTACAACTTCCTGTAAGGGAGATCACATTCTCCGAAACAGTGCTGATCCAGTTCAACTTTTCCCGGGGAGGCTGCGGggtcatccattgttttgaaagGTGTCACTTGACTGTCAGCTCTCCATCGCAGCCCTGCATGGCAGTCAAGAAAAGAACCTCCTGAACCATTCCTGCTTAACTCACCTCCACTGGA
>XR_005640683.1
gttAAGTGAACGGACTTTGTGAGGTTTAGTAGGTTGTAGAAGGACATTGTTATCCATTACTGAGGCTGACAACCAGTTATGCTGTGTTTTGGCATATTGAAATCGACAAGAGGAGACGGacatttgtgactgtaaaagagAGAGGATCGGGGAAGCTCCTCTGGACCACACAGAGAGCGATCTTCCATCCTGCTGGTGTGATGTAGACTGTCGCTGCTGTTTTCTGTTCTGCTGATCTTCCTGCTGTGGTTTACCCGGTGCTCTGCCTGCTGCCATCGCCAAGTTCGCCTTTATATCCCCTTGACTGGGATTCTGACTCCCCTCATCCGCTCCATCTACAACTTCCTGTAAGGGAGATCACATTCTCCGAAACAGTGCTGATCCAGTTCAACTTTTCCCGGGGAGGCTGCGGggtcatccattgttttgaaagGTGTCACTTGACTGTCAGCTCTCCATCGCAGCCCTGCATGGCAGTCAAGAAAAGAACCTCCTGAACCATTCCTGCTTAACTCACCTCCACTGGACCTTGCACATTTTATTCCATCTCAACATCAAACATATTGAACGATACTCtaaaatttatatataaattgcCCAGCCATACGTCAGCCCAAACTTACTTTTCCtgacacatttaacattaactTGTACATAATACATCCTCATACACTGGAGTATCTCATGAGTCCAGATGCCCATCAATACGCTGTTGCACGAGAGGTAAATGACACCAAGATATGGCagttgaagaaaaacaaatgtagagTATGTGATAACAGGACATGCAAGTCATCAATAATCAACAGTGTTATTTTTGTGGTGGTTAAGTATAGATTGATCACGCAAGTCAGGTTAACTAGCAAGATATTCGTTAAGGGCTGACGGCTGGTTAACATTACGGACAAAAACTATTTGTTCCGTGTATTCTCTTGTGTGTATCACATATccgtctcctctagctgttgtGGTTGATATGATGTAGGTCCCCTAGCTTTGACCAGACACAAAAATGGTGACAATGTGATGTCACGTGGTCCTTATAAATATATACCAGAAACTATGCACAAAGGACTACTTGCACCCTCGTGCTGCTGAATATTTGATGTATttaataaatgtcatgttttatatctgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162604 False 332 lncRNA 0.48 2 36863793 36865529
XR_005640683.1 True 1138 lncRNA 0.43 3 36863799 36866140

Neighbor

gene id symbol gene type direction distance location
LOC120568211 NA coding upstream 7950 36855196 ~ 36855843 (+)
LOC120568209 NA coding upstream 19143 36844011 ~ 36844650 (+)
LOC120568506 NA coding upstream 116125 36737148 ~ 36747668 (+)
LOC120568504 LOC103361716 coding upstream 152981 36624077 ~ 36710812 (+)
LOC120568503 LOC100700741,LOC103361717,LOC101470268 coding upstream 243197 36588654 ~ 36620596 (+)
LOC120567940 NA coding downstream 343165 37209305 ~ 37230711 (+)
LOC120567716 NA coding downstream 731674 37597814 ~ 37598425 (+)
LOC120569077 LOC103371209,LOC100691542,LOC101487415,LOC102308758 coding downstream 1172941 38039081 ~ 38098246 (+)
LOC120567717 NA coding downstream 1236437 38102577 ~ 38103710 (+)
trnas-cga_7 NA coding downstream 1330901 38197041 ~ 38197122 (+)
G120796 NA non-coding upstream 44019 36819563 ~ 36819774 (+)
G120720 NA non-coding upstream 305061 36411744 ~ 36558732 (+)
G120714 NA non-coding upstream 459028 36404553 ~ 36404765 (+)
trnal-caa_4 NA non-coding upstream 614266 36249445 ~ 36249527 (+)
trnal-uaa_9 NA non-coding upstream 621189 36242522 ~ 36242604 (+)
LOC120568213 NA non-coding downstream 5211 36871351 ~ 36875394 (+)
G120842 NA non-coding downstream 223310 37089450 ~ 37090881 (+)
G120860 NA non-coding downstream 270219 37136359 ~ 37136750 (+)
G120868 NA non-coding downstream 298708 37164848 ~ 37214610 (+)
G120872 NA non-coding downstream 333815 37199955 ~ 37200583 (+)
G120717 NA other upstream 457104 36406121 ~ 36406689 (+)
G120716 NA other upstream 458020 36405240 ~ 36405773 (+)
LOC120568940 NA other upstream 1221760 35594878 ~ 35642033 (+)
pde4ca pde4c,LOC101063915,LOC100693394,LOC102791393,LOC102313416 other upstream 2172173 34624276 ~ 34691620 (+)
pik3r2 pik3r2,LOC102792547,LOC100693657 other upstream 2256037 34569394 ~ 34607756 (+)
LOC120568208 LOC103361715,LOC100701557,LOC100700197,LOC101469035,LOC102215562,LOC102289753 other downstream 13778 36879918 ~ 37087443 (+)
G120914 LOC103396775 other downstream 436754 37302894 ~ 37306014 (+)
LOC120568367 LOC103371210,LOC101487706,LOC100534480,LOC102208811,LOC102309261,LOC104937382,LOC106522909 other downstream 1123425 37989565 ~ 38019068 (+)
G121058 NA other downstream 1889544 38755684 ~ 38755931 (+)
G121171 NA other downstream 2525832 39391972 ~ 39392776 (+)

Expression


Co-expression Network