G120914 (LOC103396775)


Basic Information

Item Value
gene id G120914
gene name LOC103396775
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 37302894 ~ 37306014 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU162729
CCCAGCTGCTCCATCACGTAGACCTCCTTGGTGTCGTTCCGGATGGCGTAGGTGTAGTAGAACCAGCAGTCGTTGGCGTCTCGCTCTTTGCAGTGAGTCAGGGGGAAGCTCTGGTCTGTAGGCTGGGGCAGGCTGTTGCGATCCTTCACCTTGATCAGCTGGAAGTAGCTGCAGTCCCTCTCACACGTGTCCTTCTTCTCACCGGCCTCGAACGCTCGGCACTGCACACAGTCTTTGTGCTCAGCGCAGACGCCAGGGCAGGTGGGACAGATCTCGCAGGTTGGACCCTGGAATTTGGGGTTGGTGCATTTGCAGAGGCCGCACTCACAGGTACCGCGGCCGTTACAGATCTGCCCGTTCTTGGCGAGGCAGGTGGCCGTCTCCAGGGAGCAGTCGCAGGCGCTGCCTGTGTAATTGGCATCACAGACGCACTTCCTGCACTCACAGCGCCCATGTC
>TU162730
gtctaatcatctcagcgtgacttgtaaccgttatattgtcggctagtttactttagaatcaaacatcagattttataaactacatgtgttttgtgtgcagaaatcttaatgtgtaaagtaactagtaactaaagctgtaacagatgaatatagtggagtaaaaagcacaatatttctctctgagatgtagcaGAGGAGatgtagaaagtggcatgaaaagaaaagactcaagtaaagtacctcaacatttggacttgagtacagtactggagtaaatgtacttagttacattccacccgTGTTCTACATACAGTTTAAGAGCtgaaaagtcagaaaatgaTTCCAGCTCAATTATTTCCCAGGTGCTCCGGCGCGACTGACTCACCGTGTCCCACTTGGCGTTCATCTTCTCCTTCTCGAACTTGGCGAACTCGCGGCGGTCATGGATGATCATGAGCAGCTTCCAGATGAGCAGCAGGGCGAGGCCAATCAGCACAATGCCTGCTACCACGCCCGCCACGATGGGGATGATGTCAGGTCCCGCTGGGCAATCCAGCTGCTCCATCACGTAGACCTCCTTGGTGTCGTTCCGGATGGCGTAGGTGTAGTAGAACCAGCAGTCGTTGGCGTCTCGCTCTTTGCAGTGAGTCAGGGGGAAGCTCTGGTCTGTAGGCTGGGGCAGGCTGTTGCGATCCTTCACCTTGATCAGCTGGAAGTAGCTGCAGTCCCTCTCACACGTGTCCTTCTTCTCACCGGCCTCGAACGCTCGGCACTGCACACAGTCTTTGTGCTCAGCGCAGACGCCAGGGCAGGTGGGACAGATCTCGCAGGTTGGACCCTGGAATTTGGGGTTGGTGCATTTGCAGAGGCCGCACTCACAGGTACCGCGGCCGTTACAGATCTGCCCGTTCTTGGCGAGGCAGGTGGCCGTCTCCAGGGAGCAGTCGCAGGCGCTGCCTGTGTAATTGGCATCACAGACGCACTTCCTGCACTCACAGCGCCCATGTC

Function

NR:

description
PREDICTED: integrin beta-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162729 False 457 lncRNA 0.60 2 37304894 37306014
TU162730 True 1008 TUCP 0.51 3 37302894 37306014

Neighbor

gene id symbol gene type direction distance location
LOC120567940 NA coding upstream 72183 37209305 ~ 37230711 (+)
LOC120568211 NA coding upstream 447051 36855196 ~ 36855843 (+)
LOC120568209 NA coding upstream 458244 36844011 ~ 36844650 (+)
LOC120568506 NA coding upstream 555226 36737148 ~ 36747668 (+)
LOC120568504 LOC103361716 coding upstream 592082 36624077 ~ 36710812 (+)
LOC120567716 NA coding downstream 291800 37597814 ~ 37598425 (+)
LOC120569077 LOC103371209,LOC100691542,LOC101487415,LOC102308758 coding downstream 733067 38039081 ~ 38098246 (+)
LOC120567717 NA coding downstream 796563 38102577 ~ 38103710 (+)
trnas-cga_7 NA coding downstream 891027 38197041 ~ 38197122 (+)
LOC120568674 klf6,LOC108246170,LOC103374282,LOC106525942 coding downstream 1314322 38620336 ~ 38628410 (+)
G120910 NA non-coding upstream 5849 37294908 ~ 37297045 (+)
G120875 NA non-coding upstream 55026 37246238 ~ 37247868 (+)
G120868 NA non-coding upstream 88284 37164848 ~ 37214610 (+)
G120872 NA non-coding upstream 102311 37199955 ~ 37200583 (+)
G120860 NA non-coding upstream 166144 37136359 ~ 37136750 (+)
G120922 LOC103366788,LOC103396765 non-coding downstream 33088 37339102 ~ 37413196 (+)
LOC120567664 NA non-coding downstream 579371 37885385 ~ 37891716 (+)
G120987 NA non-coding downstream 697672 38003686 ~ 38003940 (+)
G120993 NA non-coding downstream 718981 38024995 ~ 38025205 (+)
G120994 NA non-coding downstream 721581 38027595 ~ 38042530 (+)
LOC120568208 LOC103361715,LOC100701557,LOC100700197,LOC101469035,LOC102215562,LOC102289753 other upstream 215451 36879918 ~ 37087443 (+)
G120717 NA other upstream 896205 36406121 ~ 36406689 (+)
G120716 NA other upstream 897121 36405240 ~ 36405773 (+)
LOC120568940 NA other upstream 1660861 35594878 ~ 35642033 (+)
pde4ca pde4c,LOC101063915,LOC100693394,LOC102791393,LOC102313416 other upstream 2611274 34624276 ~ 34691620 (+)
LOC120568367 LOC103371210,LOC101487706,LOC100534480,LOC102208811,LOC102309261,LOC104937382,LOC106522909 other downstream 683551 37989565 ~ 38019068 (+)
G121058 NA other downstream 1449670 38755684 ~ 38755931 (+)
G121171 NA other downstream 2085958 39391972 ~ 39392776 (+)

Expression


Co-expression Network