G120988 (LOC102208811,LOC104937382,LOC100534480,LOC103371210,LOC106522909)


Basic Information

Item Value
gene id G120988
gene name LOC102208811,LOC104937382,LOC100534480,LOC103371210,LOC106522909
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 38011804 ~ 38019060 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU162821
GAATGTTTTATTAGAGAAACAAAAATAGTTTGGGTTTTACAATTCACACAAGAAAGTACACTAGGAGGAGACCACCTGGGAAAATATAGATTGAtacagcaaaaataaataaaaaatacatgcaGAGAAATTCAACTCAGTTGATATCAAAGAAATGCTGACTTGTATTattacctgtttttttttatgatagaCTCCAACAGGACGGCTAGTCCTCTGTGAATACAAGCCATGACGGCTCATCTGGTTGGCTGACTGCCAGCCATTCGGTTGTCTCGGAGCTGAACACTAGTTCCAATACCGTAACTGATACTTAAATATAGGTCATAAGAGATCTGTCGGTGCTCTTTCTATCCTTTCAATAAAACAACTAGAGACAGGAGATCACAATCACCAGAAACATTAACACAAGATGATTTATTATCATtcaaataaaaagtcaaaaaattgGCATCACCCTTGAAACAGAGCATTTTAATATCTAGCCATAATCATGTAAATACAGTTTTCTACCACAATGATCTCCATCATTCCAACAACAAGACTTGCGTGACGTTGAAGCGCAGCACTTATTCTTTCAGTTATGAGTCATTTTAAGATTGTTGGTTTACAAAAGTTGGGTTTTCGTTATAGAATAGACAATTtcatttaaatttgtttttaaacatgtttcaCAACACGTTAAAAGGTTAAACATTTGCTTTGTAGAAGATAATATAAACCTGTGGAGTGAAATTCCTCAAATACATGTAATAGAATATACATCCTCATAATATCCACATGGTACTTTCTGTGCATTGACTAAAGAGCAATTGTGCTCTGTCATTTCAAATACAACAATCATCTCACTTTAGTGATGAAAAATAACTTGCTAACCAAGTTCTGACTCAGATAGCATTGGCTTGACATATATGTCGCAGTTCTGTGCACAAACTGCCAAACATAAGAGGATTTTCATCTTGAATTCAAGCttgaatttttctttttgaaaaaaaaatcctttttgaCCAAATCAAGAACTTCCTTACAAACTGAAAACAAGTTGATGAAATCCAGGTAATCCCTACAATGACAGAAATGCCTGAAGATATTCCGCATTTTTCACATGAAGGAATGCATGAAAACGACCCAAAAACAGAAGCTTAAACGACGCTGATGACATTACCGAGTACATTAGGTTGAGTTGCCTGGTTGCAGCTGGTGTTGGATCAGTGTCTGACCTCAGACAGACTGGCTGGGAGGGAGACCTGGCTGACCAAACGAggccttttcatttttttttttttttcagaatctGTAATCTGGCTCGAGCGGTACATTTTCAGGAAGCACctgtttttcctttcttcctgtTCCTCTTCTTCAGCTGGCTGTCATTGGCTGGCTTCGCCCCGCGCACAAAAGCAACAGCAAGCACATTGTGCACGCAGAACGGAAGGTGAGAACAAGAGCGAAACTGGCAAGCTCAAGCTGTTCCAATTCCCCCGGACACTTCTGAACTCAGCGTAAACCAGGCCTGAGTGAGCAGACACAAAGACGGTCAAAGCAGagtctttttagttttttttcttggatTTGCTGTAGCAGTTTGTAAACGGTTGTCTTCGGCTCGTGACCACAAACGGCCGCCGCTGCTAGGCTTTGTGGCAGTAAATGTCCTTCAGTGCTTTCAGCTCTTCAATCAGGGtcttgttttggttttccagcACAGCCACGCGGTTCTCCAGACATTTGACGTactctttctttttcctgcGACACTCGCGGGCTGCCTCCCTGTTTTTCATCAGTCGGACCTCCCTCTTGCGGGTGATGTCTTCGGTGTGCTGGGGCTGAGGGTTCTGCATGGTGCCCGGGGACGCAGCCATCACAATGCTGTGAGCCAGGCCCGAGTTGGGCGAACGCAGCTGGTAGGCTGGGATGTCTCCTGTGGCAGCTGACTCCGTCTCATCCCCAGTCACAGCCATCTCTTGTTTCCAATAATCCAGCACCGCGGCAGCAAAACACCCCAGCACAGAAACACTCGTCTGCTCGGATTCCTTCTCGCTTCACTACAACCTCTCCGTCTCCTTCTCCCTTTTCCCTCTCAGCTCTCTATGCAACCGAGTGGTCAACTTGTGAACTTTGCAGCCCGATTACAATTACAGGCATTGACATCACAATGACA

Function

NR:

description
PREDICTED: cAMP-responsive element modulator-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162821 True 2167 lncRNA 0.43 3 38011804 38019060

Neighbor

gene id symbol gene type direction distance location
LOC120568250 LOC103366788 coding downstream 569043 37339059 ~ 37442761 (-)
LOC120568299 itgb1 coding downstream 680382 37297104 ~ 37331422 (-)
LOC120568634 NA coding downstream 806834 37164848 ~ 37204970 (-)
LOC120567636 LOC108232809,LOC102291799 coding downstream 1451157 36501801 ~ 36560647 (-)
LOC120567712 LOC107092464,LOC103396797,LOC102797029,LOC102291799 coding downstream 1530484 36465612 ~ 36481320 (-)
LOC120567608 LOC102208532,LOC101487122,LOC100698585,LOC104929446,LOC104960242 coding upstream 111851 38130911 ~ 38133834 (-)
LOC120567865 NA coding upstream 824971 38844031 ~ 38884285 (-)
LOC120567984 LOC103372383 coding upstream 868040 38887100 ~ 38942983 (-)
lactb2 lactb2 coding upstream 938086 38957146 ~ 38965099 (-)
LOC120568116 LOC100697792,LOC102205351 coding upstream 1039371 39058431 ~ 39373807 (-)
G120990 NA non-coding downstream 4746 38006819 ~ 38007058 (-)
G120936 NA non-coding downstream 714892 37294954 ~ 37296912 (-)
G120865 NA non-coding downstream 859920 37151549 ~ 37151884 (-)
G120848 NA non-coding downstream 922928 37088094 ~ 37088876 (-)
G120846 NA non-coding downstream 932273 37079302 ~ 37079531 (-)
G121018 NA non-coding upstream 85837 38104897 ~ 38105100 (-)
G121022 NA non-coding upstream 119925 38138985 ~ 38139436 (-)
G121028 NA non-coding upstream 241298 38260358 ~ 38260690 (-)
G121030 NA non-coding upstream 308555 38327615 ~ 38328121 (-)
G121038 NA non-coding upstream 500415 38519475 ~ 38519747 (-)
LOC120567663 pard3,LOC100698856,LOC102309987 other downstream 36271 37623927 ~ 37975533 (-)
LOC120567715 LOC103372549,LOC101466848,LOC102313517,LOC102210753 other downstream 718328 37246223 ~ 37293476 (-)
G120891 LOC104957948 other downstream 778327 37227935 ~ 37233477 (-)
trnal-uaa_18 NA other downstream 950269 37061453 ~ 37061535 (-)
trnal-caa_10 NA other downstream 955804 37055918 ~ 37056000 (-)
G121035 NA other upstream 415656 38434716 ~ 38435172 (-)
G121181 NA other upstream 1357638 39376698 ~ 39376991 (-)

Expression


Co-expression Network