G120995


Basic Information

Item Value
gene id G120995
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 38100144 ~ 38100905 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU162828
aattgaataaaacacccaaaattaaataaaagtagagatccgatcttttgttgtacttgcggCGCCcgttgtatggaatcatccatgTAATTTTTGGGTAATCAAAAaagaaaacgggtcaaatttgatacAAAGACAACATAAGGTTTAAGAGATTTCGACAACGTTCCCAAGTTTTTAAAACCAGTGACTGAAAATGCATTAGGGGAAAGCAACGAACAGAGCGGTTTCCTTATTTCCTGAGAAGTACACAGTTTGGAGCTATCAGACTAAGGATAAGGGAACACAAAGTTAACTTTTCAGTAGCCTGGACCAAAGTAAACTACACAAATGTGGCTGTGATCGTAACATAATACCTTATAACACCATCAATCCTACTAGAGTCCTCCCTATGGTGTCCAGCAGGTGGGTTATTGTTGGAAACACAGCCCTTTAATAATTGTCACACATAAAGTGATCTTCTATCTCCAGTGTGTGACACAGATGAGTCCTGTTGATCTGTCCTTCAGAAAAAGTATCCATAGAAATAGCACCAGCCAAGATGTATGCCCCGAAATTCAGAGTATCCCAGATTActaaaagaatataaataaGCCACAAATGGTGTGGTTCAATCAAAAATTTGAAATCATTTGTAGACTTTTCAATATGACAGTAATAGCATCATATCAACCCTGACTGCTGAGCCAAGTGTTGAAACTGCTGCCCATTGATGATTTTGTATTTCCATTTCTAATTGCTGCTGGCAAATAGCTGATCAGG
>TU162830
cgatcttttgttgtacttgcggCGCCcgttgtatggaatcatccatgTAATTTTTGGGTAATCAAAAaagaaaacgggtcaaatttgatacAAAGACAACATAAGGTTTAAGAGATTTCGACAACGTTCCCAAGTTTTTAAAACCAGTGACTGAAAATGCATTAGGGGAAAGCAACGAACAGAGCGGTTTCCTTATTTCCTGAGAAGTACACAGTTTGGAGCTATCAGACTAAGGATAAGGGAACACAAAGTTAACTTTTCAGTAGCCTGGACCAAAGTAAACTACACAAATGTGGCTGTGATCGTAACATAATACCTTATAACACCATCAATCCTACTAGAGTCCTCCCTATGGTGTCCAGCAGGTGGGTTATTGTTGGAAACACAGCCCTTTAATAATTGTCACACATAAAGTGATCTTCTATCTCCAGTGTGTGACACAGATGAGTCCTGTTGATCTGTCCTTCAGAAAAAGTATCCATAGAAATAGCACCAGCCAAGATGTATGCCCCGAAATTCAGAGTATCCCAGATTActaaaagaatataaataaGCCACAAATGGTGTGGTTCAATCAAAAATTTGAAATCATTTGTAGACTTTTCAATATGACAGTAATAGCATCATATCAACCCTGACTGCTGAGCCAAGTGTTGAAACTGCTGCCCATTGATGATTTTGTATTTCCATTTCTAATTGCTGCTGGCAAATAGCTGATCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162828 True 762 lncRNA 0.38 1 38100144 38100905
TU162830 False 722 lncRNA 0.39 1 38100184 38100905

Neighbor

gene id symbol gene type direction distance location
LOC120569077 LOC103371209,LOC100691542,LOC101487415,LOC102308758 coding upstream 1898 38039081 ~ 38098246 (+)
LOC120567716 NA coding upstream 501719 37597814 ~ 37598425 (+)
LOC120567940 NA coding upstream 869433 37209305 ~ 37230711 (+)
LOC120568211 NA coding upstream 1244301 36855196 ~ 36855843 (+)
LOC120568209 NA coding upstream 1255494 36844011 ~ 36844650 (+)
LOC120567717 NA coding downstream 1672 38102577 ~ 38103710 (+)
trnas-cga_7 NA coding downstream 96136 38197041 ~ 38197122 (+)
LOC120568674 klf6,LOC108246170,LOC103374282,LOC106525942 coding downstream 519431 38620336 ~ 38628410 (+)
pitrm1 pitrm1 coding downstream 718142 38819047 ~ 38843071 (+)
frrs1a NA coding downstream 1385225 39486130 ~ 39522532 (+)
G120994 NA non-coding upstream 57614 38027595 ~ 38042530 (+)
G120993 NA non-coding upstream 74939 38024995 ~ 38025205 (+)
G120987 NA non-coding upstream 96204 38003686 ~ 38003940 (+)
LOC120567664 NA non-coding upstream 208428 37885385 ~ 37891716 (+)
G120922 LOC103366788,LOC103396765 non-coding upstream 686948 37339102 ~ 37413196 (+)
G121023 NA non-coding downstream 55448 38156353 ~ 38156690 (+)
G121024 NA non-coding downstream 87070 38187975 ~ 38188247 (+)
G121032 NA non-coding downstream 328756 38429661 ~ 38430105 (+)
G121034 NA non-coding downstream 333842 38434747 ~ 38435000 (+)
G121041 NA non-coding downstream 447521 38548426 ~ 38548626 (+)
LOC120568367 LOC103371210,LOC101487706,LOC100534480,LOC102208811,LOC102309261,LOC104937382,LOC106522909 other upstream 81076 37989565 ~ 38019068 (+)
G120914 LOC103396775 other upstream 794130 37302894 ~ 37306014 (+)
LOC120568208 LOC103361715,LOC100701557,LOC100700197,LOC101469035,LOC102215562,LOC102289753 other upstream 1012701 36879918 ~ 37087443 (+)
G120717 NA other upstream 1693455 36406121 ~ 36406689 (+)
G120716 NA other upstream 1694371 36405240 ~ 36405773 (+)
G121058 NA other downstream 654779 38755684 ~ 38755931 (+)
G121171 NA other downstream 1291067 39391972 ~ 39392776 (+)

Expression


Co-expression Network