LOC120567609 (LOC103353062,LOC104950308)


Basic Information

Item Value
gene id LOC120567609
gene name LOC103353062,LOC104950308
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18043397 ~ 18045228 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814518.1
ATGTTGCTGTTTGTGGTCAGCTTAGCCGCTTTGTGCACCGCCGCTGCACGGCCTCCGCTCAGCTATCTGGAGAATCATTTCGCCGCCGACAATGAGTCAGAGGAAGTACGCTCAGCTGCCATCAAGAGACTTTTGGAAGTTTTTGGGATGGAGGACCCCCCTGCTATCCATCGACACAAGCAGCCACCTCAGTACATGCTTGATCTGTACAACACGGTTGCTGATGTGGACGGTGTGACTAAGGACCCGTATCTTCTAGAGGGAAATACTGTGCGCAGCTTCTTTGACAAATTGCGCAGTGAACAGGTGGAGTTCAGGTTCAATTTGTCCACGGTGGCCAGAACTGAGAAGATTCTCACTGCAGAGCTCCATCTTTTCAAGCTGCAGCCTCTGGCACCACTGACATTCAACAGACACCATTTCTGCCAGGTTAGTGTTTATCAGCTGCTTGACAccagcaaaaacaacaaaacacaggaTAAGAAGCTGCTGTCTTCTCGACTCATCCCAGTTCACTCTACTGGTTGGGAAGTGTTCACCATTACACAAGCAGTCCGATCCTGGATGATAGATGAAGGCAGTAACATGGGGCTCCATGTGGTGGTTCGAACCCTAGGGGGAAGCCAGATGGATGGGAAACTGATCCGCTTTGCTTCAGGACGAAACCATCACCAGAGCAAACAGCCCATGTTGGTCCTCTTCACTGACGATGGCCGCCGCCGCTCTACTTCTCTTGAAAGCATAGACCCAAACGATACCACAGCCACTTCCAGCCTGCCCCAGGCCTCCATGTCAGGTCCCTCCTCCCGCAGCACCCGCTCCCTGGACTACAGCGAGGAAGAAGGGGTGTCGTTACCCTGCCAGCGCCTGCCTCTCTATGTTGACTTTGAAGAGATCGGCTGGTCAGGCTGGATTGTGTCTCCCCGGGGCTACAACGCTTACCACTGCAAAGGCTCCTGCCGCTTCCCTCTGGGTCAAAACATGAGGCCGACCAACCATGCCACCGTCCAGTCCATCATCAACGCTCTGAAGCTGATCAAAGGCATTGAGAAGCCGTGCTGTGTGCCCGACAAGCTCTTCTCCATTAACTTGCTCTACTTCGATGATGCTGAAAATGTGGTGCTCAAACAGTATAATGACATGGTGGCTGGAAGCTGTGGCTGCCACTGA

Function

NR:

description
PREDICTED: bone morphogenetic protein 2-like

GO:

id name namespace
GO:0040007 growth biological_process
GO:0005576 extracellular region cellular_component
GO:0008083 growth factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814518.1 True 1170 mRNA 0.53 5 18043397 18045228

Neighbor

gene id symbol gene type direction distance location
im:7138239 LOC104950317,LOC103353072 coding upstream 1668 18035952 ~ 18041729 (+)
LOC120569107 nrtn,LOC103353066 coding upstream 57857 17975976 ~ 17985540 (+)
larp6b NA coding upstream 69841 17972055 ~ 17973556 (+)
LOC120567749 LOC103353067 coding upstream 75704 17787785 ~ 17967693 (+)
tceanc2 tceanc2 coding upstream 459636 17580659 ~ 17583761 (+)
cib3 cib3,LOC107687907 coding downstream 2838 18048066 ~ 18052429 (+)
ap1m1 ap1m1,LOC107696211 coding downstream 29879 18075107 ~ 18090043 (+)
LOC120568288 klf2,LOC104966780 coding downstream 102670 18147898 ~ 18149844 (+)
LOC120568290 dnah8 coding downstream 130755 18175983 ~ 18231000 (+)
LOC120568291 NA coding downstream 212902 18258130 ~ 18264859 (+)
G115600 NA non-coding upstream 23287 18019905 ~ 18020110 (+)
G115599 ranbp3,LOC102787870 non-coding upstream 23783 18016563 ~ 18019614 (+)
G115585 NA non-coding upstream 75355 17967740 ~ 17968042 (+)
G115516 NA non-coding upstream 463808 17578910 ~ 17579589 (+)
G115513 LOC103353967,LOC104931261,LOC102192286,LOC100692446,LOC101469749 non-coding upstream 477915 17565255 ~ 17565482 (+)
G115633 LOC102219409,LOC104931433,LOC103479775,LOC104950312,LOC105022474 non-coding downstream 7640 18052868 ~ 18058243 (+)
G115636 tpm4,LOC107383605,LOC103146061,LOC102218802,LOC103479776 non-coding downstream 15481 18060709 ~ 18065238 (+)
G115660 LOC102296215,LOC102788438,LOC100704618 non-coding downstream 126451 18171679 ~ 18174071 (+)
LOC120568296 NA non-coding downstream 187389 18232617 ~ 18233706 (+)
G115690 NA non-coding downstream 188515 18233743 ~ 18234058 (+)
LOC120567767 NA other upstream 13502 18027280 ~ 18029895 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other upstream 559844 17406497 ~ 17483553 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other upstream 1431191 16610376 ~ 16612206 (+)
LOC120568419 LOC102779359 other upstream 1515715 16439025 ~ 16527682 (+)
LOC120568164 LOC104950913,LOC104937610,LOC103355754 other upstream 1814846 16226307 ~ 16228551 (+)
G115729 NA other downstream 259921 18305149 ~ 18354344 (+)
skila skil,LOC102782637 other downstream 521405 18566633 ~ 18602263 (+)
LOC120568691 NA other downstream 615201 18660429 ~ 18674140 (+)
LOC120568911 NA other downstream 675137 18720365 ~ 18725447 (+)
LOC120568770 NA other downstream 971811 19017039 ~ 19052242 (+)

Expression


Co-expression Network