bcl10 (bcl10,LOC102797731)


Basic Information

Item Value
gene id bcl10
gene name bcl10,LOC102797731
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 20357116 ~ 20359100 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814530.1
ttatttcacttgAAAACAGTTTACACGGATAAACACGAGGAAAGTTGGACAACTGTAGCCTAGTCTGCTGTTGTAAGAGACGTTTCATCtgaattttagactttttaagaggTACCTGACTACATAAATCGGCTCATCTTAGTTTAAAACCGACGACTCAGCTGTCTGTAACCTTACTTCTCTTCTTCTGGTTTTCAACGTAAACCTCGACAGACACGAATCAGGAAGTCCGGGGATTTTTCCGAAACAAAAGTTGAATGGAGAGTGGCTGTACGCCACCTTTTAACGACAAATAATGAAGAGCCACATTTGTTAACTCTTACAGTTGATGTATCGATGTAGCTAGTGCGTTTTATTGCTATCTTATTAACTTATCTTAGTCGTCATTCGTTACCCGGAACACCTGGATTTTCACTTTACGGGTGAAAGGGATGGATGTTCCTCACCTCAGTGAAGATGAAATGGCAGAGATTAAAAAAGACGTGCTGACCAGACTgcggcactatctctgtgacAAGATCAAAGCCGAACGCCACCTTGACTACCTGCGCTCTCGCAGGATCCTGACGCGAGACGATGCGGAGGAAATCAGCTGCCGGACCACACAGACCAAGAGGACGGCCGTGCTGTTGGACATACTGGCCGAGAACCCCCGGGGCCTGGATGCCTTGATTGAGTCCATAAGGGAGCTGCGCTCACAGAACTTCATCATCACTAAAATCACAGATGAGGTGCAAAAGGCGAAAAACGAGAAGATCGAGTCTCTCAGAGCTTCCAGTACCTTGTCTGACAGCAGCCTCTGCGATCCGAGCACAACCAGCGACATCCCCCCGACGTTTTCAAACAACTCCACCCTCCTCTTTCACCCAGATGGAGAACGCAGTTTTTCAGCCTCAGACGTAGCAGGCTCGCTCAATCTGCCATCGTTACAGAAAGGTGGAGACTTGCCTTCTGTGGCCGGTGCTAGCATCGGCATAGCTTCCTCCACAACCTCCTCCAGCCTCCCGAAGCCCGGAGACCCCGGAGCTCCTCCACTGCCGGAGGAAGAAATGGTTCAATCCCCTTCCAACATAGATGCCGGAGCACCAGGGTGCACCAACAGCGGAGGGGACCCAAACTTCCAGCCCCTCCGGTCGCGCTCTCTCACTCCGACATCACATAGGAAcatcttttaatttcacataagACACTTCTCATGCAGTTAAAGGGACAAACCAGCAGAATCTGCAGCCACTCAACAAACACTCTCTCACTGTTGTCTTGCACTCTTTTTGGTGTTGCTCATGCCTTTGATTAGGCATAAATTGCTACGATACTAC

Function

symbol description
bcl10 Acts upstream of or within positive regulation of NF-kappaB transcription factor activity. Located in cytoplasm. Part of CBM complex. Is expressed in gill; intestine; male organism; and spleen. Human ortholog(s) of this gene implicated in MALT lymphoma; immunodeficiency 37; malignant mesothelioma; and non-Hodgkin lymphoma. Orthologous to human BCL10 (BCL10 immune signaling adaptor).

NR:

description
PREDICTED: B-cell lymphoma/leukemia 10

GO:

id name namespace
GO:0042981 regulation of apoptotic process biological_process
GO:0005622 intracellular anatomical structure cellular_component

KEGG:

id description
K07368 BCL10; B-cell CLL/lymphoma 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814530.1 True 1319 mRNA 0.49 3 20357116 20359100

Neighbor

gene id symbol gene type direction distance location
LOC120568873 NA coding upstream 9632 20339503 ~ 20347484 (+)
LOC120568950 atp5l,LOC108233819 coding upstream 20992 20334361 ~ 20336124 (+)
kiss1ra gpr54,LOC102788056,LOC101463985,LOC104942405 coding upstream 104979 20236804 ~ 20252137 (+)
zgc:113531 LOC104917724,LOC100692768,LOC101464837,LOC104948902,LOC102196942 coding upstream 332476 20020348 ~ 20024640 (+)
eef1da LOC106532782,LOC101466496,LOC102194655,LOC102290633,LOC103361414 coding upstream 409646 19921315 ~ 19947470 (+)
mcoln3a LOC104953893 coding downstream 1183 20360283 ~ 20366532 (+)
ssx2ipa ssx2ip,LOC103359758 coding downstream 7660 20366760 ~ 20373145 (+)
gpt LOC102200225,LOC103359759,LOC101485501,LOC100690242,LOC102299610,LOC102784352 coding downstream 17875 20376975 ~ 20396218 (+)
fuz fuz coding downstream 18058 20377158 ~ 20379307 (+)
c1ql3b LOC108241646,LOC102783794,LOC101484294,LOC102201850,LOC103369334 coding downstream 48568 20407668 ~ 20409033 (+)
G116327 NA non-coding upstream 34575 20322288 ~ 20322541 (+)
G116322 NA non-coding upstream 41845 20314888 ~ 20315271 (+)
LOC120567788 NA non-coding upstream 153378 20202125 ~ 20203738 (+)
G116216 NA non-coding upstream 454297 19902243 ~ 19902819 (+)
G116215 NA non-coding upstream 471417 19884595 ~ 19885699 (+)
LOC120567944 NA non-coding downstream 289505 20648605 ~ 20654150 (+)
G116461 NA non-coding downstream 332519 20691619 ~ 20691985 (+)
G116463 NA non-coding downstream 333787 20692887 ~ 20693141 (+)
G116464 NA non-coding downstream 334320 20693420 ~ 20696473 (+)
G116465 NA non-coding downstream 337804 20696904 ~ 20699209 (+)
emilin2a NA other upstream 891735 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 1304874 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 1631669 18720365 ~ 18725447 (+)
LOC120568691 NA other upstream 1682976 18660429 ~ 18674140 (+)
skila skil,LOC102782637 other upstream 1754853 18566633 ~ 18602263 (+)
LOC120567833 gbg5 other downstream 14127 20373227 ~ 20375633 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other downstream 523517 20882617 ~ 20915322 (+)
LOC120568354 NA other downstream 1511853 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 2248949 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 2282410 22641510 ~ 22681293 (+)

Expression


Co-expression Network