LOC120567619 (LOC103362200)


Basic Information

Item Value
gene id LOC120567619
gene name LOC103362200
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14835084 ~ 14849810 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814532.1
ACCAAACACCAGCTGTATCCGAGTCTTTACAAGCGGAGTCTGTCTTCATCTGTTACATCTTACAGCCAGTTTCATGGCTAATAAGCGCCCACTGCTTCTGAATATTGATCGCTCACTGTGATGACTTTGTGCAGATTGATGCTGTGGAGCTTCAAGGAAATAACAGTCATGTGGTGAGATTTGTGCGTCATTGGGGACCCCGGCGGTGGCCGCGGTGTGTACTGTTTCTTCGTCGTGTCTCAGACCGGAGTGAGGGGGTCAGTAAGTGCACACACCGATCACCGATCAGTGCGTTAATTGAATCCATCAACCGACCAATCCGTCGTGACCGGTGCGCCTCAACCCGGATGACCTCCGGAGTGACGGAGAGAGTGTGGAGGGAGTAGCGCCGGAGGTGATGCGCATATCTGCAGGTACACTAGCGCTGTCGTAAAACGGGAGTCGGGAGCAAGTCAGCAATCATTAAAGCGATGCCAGGGGTAACCAAGTACAATTTAGTGGATGACGCGCACGATTTGAGGATCCCCATGCACAACGACGAGGTGTTTAAGCATGGGGTCTGCTTCGAGGCAAAGTACATTGGCAGTTTGGAGGTGGGTCGCCCCAGCAGCCGGATGGAGATAGTTGCTGCTATGAGAAGAATCAGATATGAATTCAAACTGAAGaatataaagaaaaagaaggtcAACATTGTCGTATCCACTGATTTTGTCAAAGTGATTTTGCTCAAAAGGAGAAAGAGAAAAGGGTGGTCATGGGACGAGAATACGATCTTGGTGACGCAGGATCCCATCTACAGGATTTTCTATGTCTCACATGACGCCCAAGACTTGAAGATCTTCAGTTATATAGCGAGAGATGGCCAGAGCAACATTTTCCGCTGCAATGTGTTCAAGTCGAAGAGGAAATCTCAGGCCATGAGGATCGTGCGGACAGTGGGTCAGGCATTCGATGTGTGTCACCAGCTGACCCTGCAGCAGAAAAGCGATGacaaggaggatgaggaggggaAGGCAGAGGAATCAGAGGCAGTGCCAGCAAAGAAGAGGTTTGCATTGCCAGAGGAGACCGAGCTTGAAGCCACTACAGAGGAGAGCATTGAGTGTGTCTCCTTATCAGACCTGGAGAAGAGTAAAAAGGACGAGGCCCTCGGTAACAATGACAAGATGTCTGATGACCCATCTCTCCTGCTGGGCTCCCCGATCCTTGGAGCCTCTGTGTCGGGTCAGTTGGCGAAAGAGGCTCCCTGCTCTACAGAGCACCAGGTCCAGCTCCTCCAGAAACAACTGCAGCAGCAGGAACAGCAAGCACTGGCAGCTTGCGAGCAGGTCCATGTACTTCAGGAGCAGCTGTCGGTGGAGGTGTGTGCGCGGACTGAAACCCAGGCCAGAGTGCAGAGGCTGCTGCAGCAGAACACCGACCTGCTGCAACACATTTCCCTGCTGGTCAAACAGATCCAGGAACTGGAGCTCAAATCTGCTGGCCACTTAACATCTATGGGATCCCAGGACAGTCTTCTAGAAATCACTTTCCGCGCCAAGCCCCCCAGCTCTTCTTCATCTATGGGTGCCTTTGCAGCTCAATCCCAGGTCCAGATTAGTGACAGTGCCTGGGTCTCCGCCCTCCCCGGGCCCTGCTCTCCAGGCACCGACACCAGCCATCTTGGGCTCAGTGGCAGTGGAGTTCGTCTCGAGTGCTTCCGCTTCACCTCCCGAGGGCCGGACAGCCAGGAGCAGGGCCAGGACGCAGGGGAGACTCCCAGCGACGGAGCCCCGGATGAAAGCTCGCTGCTGGGGGAGCAGGTCCTGGGAGCCCTGGAGCTGCTGCGGTTTAGGGAGTCAGGGATCGGGTCGGAATACGAATCAAACACAGATGAGAGTGATGACCGGGACAGCTGGGGGCAGGGGGAGGGAGTGGGGGCTGACGGTGCCGCTCGGCTCTTAAACGTGCTGAACGCAGAGAGTCTGCCGGACTGCTTAGGGGATGAGATGGCTGTGTAGTGGTGCTCTTAAAGCTGCTCAAGGCAACATTGCACGTATACACCACCCCAATGAGAAACAGCTGAAATTCAGAATCTGAAGGACTTCACAACaatatacagtttttttcgattgctaaacgacagtgggcacaactggagtcacatgtgcaaaactctaactacagtctgcacagcagcagtt

Function

NR:

description
PREDICTED: carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814532.1 True 2183 mRNA 0.54 10 14835084 14849810

Neighbor

gene id symbol gene type direction distance location
LOC120569097 LOC100708378,LOC102195897,LOC102780857 coding downstream 5331 14817259 ~ 14829753 (-)
LOC120569101 LOC103362378,LOC100708654,LOC102196187 coding downstream 18488 14811662 ~ 14816596 (-)
serbp1b serbp1,LOC108238257 coding downstream 25460 14798114 ~ 14809624 (-)
LOC120567646 pik3r3,LOC103362845,LOC104935068 coding downstream 107654 14720281 ~ 14727430 (-)
LOC120567642 ipp coding downstream 119927 14709909 ~ 14715157 (-)
rgs5b LOC100702567,LOC104966170,LOC102195627 coding upstream 12721 14862531 ~ 14863690 (-)
LOC120568704 LOC100707385,LOC103362031,LOC102195140 coding upstream 45362 14895172 ~ 14917431 (-)
LOC120568424 LOC104947192,LOC102778292,LOC101467453,LOC103361239,LOC102192915 coding upstream 190035 15039845 ~ 15044653 (-)
zbtb41 zbtb41 coding upstream 270773 15120583 ~ 15127965 (-)
LOC120568089 NA coding upstream 288017 15137827 ~ 15146730 (-)
LOC120569096 NA non-coding downstream 52612 14780276 ~ 14782472 (-)
G114661 NA non-coding downstream 83556 14751245 ~ 14751528 (-)
G114636 NA non-coding downstream 141127 14693632 ~ 14693957 (-)
G114633 NA non-coding downstream 145018 14689457 ~ 14690066 (-)
G114544 NA non-coding downstream 317191 14517476 ~ 14517893 (-)
LOC120568695 NA non-coding upstream 104768 14954578 ~ 14958403 (-)
G114733 NA non-coding upstream 151334 15001144 ~ 15003045 (-)
G114752 NA non-coding upstream 226331 15076141 ~ 15081980 (-)
G114836 NA non-coding upstream 414710 15264520 ~ 15266224 (-)
LOC120568803 NA non-coding upstream 537668 15387478 ~ 15393259 (-)
G114680 NA other downstream 38040 14795918 ~ 14797044 (-)
LOC120568687 NA other downstream 216860 14613613 ~ 14618224 (-)
tfr1a NA other downstream 866273 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 1352859 13469531 ~ 13482225 (-)
G114152 NA other downstream 1746521 13084561 ~ 13088563 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 440272 15290082 ~ 15304610 (-)
G115164 btf3l4 other upstream 1294350 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 1332844 16182654 ~ 16201698 (-)
mppe1 mppe1,LOC102781954 other upstream 1467608 16317418 ~ 16327426 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other upstream 1481142 16330952 ~ 16335956 (-)

Expression


Co-expression Network