LOC120567621 (LOC103360515,LOC104929875)


Basic Information

Item Value
gene id LOC120567621
gene name LOC103360515,LOC104929875
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 11128019 ~ 11139884 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814534.1
TTCAAGAGAATGTCTCTCATCCCATTGCCGGCCATCATCAAAGGAAGATCAATGTTTCTCCATGTTGCTGTTGGTGGTGACTGTTACTGTTTCTAACCTAGATGACTGCCTGCTCTATTTTCCAGAGGACATCCATCTTTAGCTTTAAATTGTCATCAAGATTCAAGAAGTCTCTTTTCTGAAGCCATGATTAAAGATCGGACGGACAAGGCTTTTGGTGCCATTACGAAGAGTCACGTGGAAAGGGGCAGTGACTTTTCCACCACTGTAACTCATGGAAACTCTTGGGCTCGTCATACTCAAGGTATTTGTAAATGCGAAGCTGACGGACTCAtttaataagggaaaacttgtgacacttttttttttttattgaaactaTTTGGTCACTTCATCAATTCAGAATGACTACCTCAGATCATGCATTCGATCAAACCTTTCTTGACAAAATTGTCTTGTGGAGTTCTAGGGAATCCTAAACTCTATGGCATCCAAAGAAGATTAATTCGACAATGACGGAGGATCGGGAGCATGTGTGATGATCTCATGCCTTTCTTTTGACCTTTGGTGACCCTTATTTGTTGGAAAAACCAGACTGAGACGGAAACAGATAGAGGTCAATAGCCTGGCAGGATTCAATCTTCTGTCTGGTACGATGAAACAATGTATTGCAGCGGGCCGGTGTCCATAAACTCTAGGTTTCCCTAGGAATCCCCTGGCACCCCACAATAATTTAAGTGTTTGGGGGCAGGGGAGGGTTTAAATGGTGTTAATAacagaggaacagagtgaaGGTTCAAAGGTTCGGGAAAATGGAGTGTTCCGAGGTGTGGGACTGGGCGAGAGTCCGCTTAGGACTAATAAAGGGGCTATGGATACACCTGCCATATCCATCaccaatgttgaaaaaaatggggATGAGTGTGAGGTGTCGGGAGAGGATGATAGCGAGGATTTTGAAGTTGATTACACGCACAACTATTGGGATGATGAGGACGATATCTACCAAGAGTTCGAGGAGTTGGACTTTGATGCCCTGCCAGATCGCTCGGACACACAGAGCATTGCCTCCGACGATTCTTTCTACCCCCATGACGATTCAGTTGGGTCTCAAATTATGTACCAGCGATCGCCATGCCCTGACAGCCCCGAACCCATTTCCTTCTTTAAGGCCTgctgcaacaacaacaccatCATCGTCAAGATTATGATCAGACAAGGAGTGACCGAAGAGGAAGTGAAAGAGACGGATCGGAACAGAAGAtCTGGTCTGATTATGGCGTGCTACCATGGCTACGTGGACGTGGTCATCGGCCTCTCTCAGTGCCCGTTTCTCGATGTCAACTGGCAGGACAACGAGGGTAACACTGCTCTTATTACTGCAGCACAAGCAGGTCATGCGTTCATCTTGAACTACCTACTCAACTACTTCCCTGGCCTGGACATCGAGAGGAGGAACTGTCACGGTTATACAGCTTTGATGAAGGCTGCCATGCAGGGCCAGGCTGAGTGTGTCAGGGCTCTCATGCTGGCTGGAGGTGATATTCAGGCAAAGGACAACAGTCGCAATATGACACCCAGGGAGTGGGCTCTCTTCACTGGTCGATACGAGACAGCCAATCTGATGTATCGGCTGATGTCAAAGCCCTGTGCTGAGCAGTTCTGTGACACCTTCTCCCTGGAGTGGCCCATGCTGGAGGAGCTGGTGGCCCAGGCCCAAGAGCCAAAGTCTTGCTGGAGGCGTTTGATCAACTCCCTTTCCTGCTGCCCTCATGGGTTTTACATCAACAACAAGGTTAACCCTGTGGATGACGGCGTTCTTGAGCACATGGTCCACATCACCACCAGTATCTCCAGTCCAGTCATTGCCACAGCTTGCCGCACTGTGTGTCCAGGCAGCCCTCCGTGCATCGGGAAGCGTCGTCAGGCAGTGCAGGAGATCCTGAGGAGGCAACGGGTATCTGAACTGAAGCGTCTGGGCCCGGACAGACTTAACAACTACAAGAGATTTTTCCAGAACTCGCGGATCCTCCTTCTCCCCAAGTCGATGGATCGGAGAGCCAGCCTGCAGCCTCAGCTGCTAAACGACATGGCCACAGTGGCCATGAGACGAGCAAGCCTCCTGCCTCTTAATATGCTGAGGAGAAGCAGCGTGCGACCAGGCATCGTAGTGCCCAAAGTGAGGCTCTGCAAAGCCCCGCCTCTGAACTTCAAGCCTGAAAAACTCAAACGGAGCAATAACAACAACCAGCTCCAGATCCCCAAGTGGAACTACAAGATGAAGAAAATagagaggaggcaggaggaggagaggaaaaaactGTTACCTCTGGTAAGGAGAAGATGAAGGGAATGTGTGTCTTGTTGGAAAGCCCTGACAAAGCACCATGTTGCATTCCAAGAGAAATCGACCAGAAGAATTGACTCTGTTAATGTAAATACACCTGCCAGTTGCCATTTTTGTTTGCTGCGATTGCCGacattattagggcccgagcgccgacagcggcgaaggccctattgaaactgaa

Function

NR:

description
PREDICTED: ankyrin repeat domain-containing protein 33B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814534.1 True 2531 mRNA 0.49 5 11128019 11139884

Neighbor

gene id symbol gene type direction distance location
LOC120567856 LOC104929871,LOC103355149,LOC100690953,LOC102207159 coding upstream 4544 11100278 ~ 11123475 (+)
LOC120567862 LOC104961053,LOC103355148,LOC107384202 coding upstream 27803 11096777 ~ 11100216 (+)
LOC120567857 LOC103355151,LOC102312891,LOC104961060,LOC101474626 coding upstream 32532 11083863 ~ 11095487 (+)
LOC120567859 NA coding upstream 49145 11077232 ~ 11078874 (+)
xrn1 xrn1 coding upstream 210514 10892377 ~ 10917505 (+)
lyn lyn,LOC100711419,LOC102310923,LOC101477890 coding downstream 206561 11346445 ~ 11364696 (+)
urod urod coding downstream 225485 11365369 ~ 11376582 (+)
toe1 NA coding downstream 390954 11530838 ~ 11537187 (+)
tmem53 tmem53,LOC102777675 coding downstream 398170 11538054 ~ 11540262 (+)
rnf220a rnf220,LOC103363915,LOC101079104,LOC103396675,LOC102292039,LOC102777210 coding downstream 582233 11722117 ~ 11874494 (+)
LOC120567863 NA non-coding upstream 72213 11046556 ~ 11055806 (+)
G113498 LOC104957117 non-coding upstream 199776 10926456 ~ 10928243 (+)
G113492 NA non-coding upstream 240352 10886992 ~ 10887667 (+)
LOC120569030 NA non-coding upstream 284799 10840517 ~ 10843220 (+)
LOC120569032 NA non-coding upstream 288916 10837503 ~ 10839103 (+)
G113619 NA non-coding downstream 379416 11519300 ~ 11524768 (+)
G113620 NA non-coding downstream 385094 11524978 ~ 11525250 (+)
G113621 NA non-coding downstream 386127 11526011 ~ 11579470 (+)
LOC120568871 NA non-coding downstream 443020 11582904 ~ 11694250 (+)
G113682 NA non-coding downstream 444552 11584436 ~ 11584636 (+)
LOC120568835 NA other upstream 241541 10885595 ~ 10886478 (+)
G113130 NA other upstream 2125451 8944477 ~ 9002568 (+)
pdca LOC103370803,LOC104933924,LOC101478313,LOC102200750,LOC100699795,LOC102301525 other upstream 2225172 8895927 ~ 8902847 (+)
LOC120568881 mfsd12,LOC104931866 other upstream 2302208 8812897 ~ 8825811 (+)
LOC120568415 LOC103370799,LOC104931865,LOC101476899,LOC102794599,LOC102300092 other upstream 2318560 8789209 ~ 8809459 (+)
pkia pkia,LOC102780447,LOC102205080 other downstream 192684 11332568 ~ 11346225 (+)
abhd4 abhd4 other downstream 982785 12122669 ~ 12128022 (+)
LOC120568189 nop9 other downstream 1017565 12157449 ~ 12166277 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other downstream 1442758 12582642 ~ 12599840 (+)
LOC120568152 LOC104963178 other downstream 1761655 12901539 ~ 12907243 (+)

Expression


Co-expression Network