LOC120567626 (LOC103364420,LOC104948953)


Basic Information

Item Value
gene id LOC120567626
gene name LOC103364420,LOC104948953
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14422482 ~ 14429558 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814540.1
ATACCCTTCCATTCTGCCCCTGTGTACGGTTCCCCATGTCAACTGACAGGGGGTTTCCCTTTATACAACAGGTTCTCTACTGGGCTCTCTACACTGTTGCATTAGATTGGATTCTCATTTTGTAATAATGGACAACAGTCCTCTGCAGGTGTTGACTGTCCCCACAGCTCCCTACCCCGACCAGAGACCCGGCACCAGCGGCCTGAAGAAAAAGGTCTATGTATTCCAGTCTAGGAGGAACTATCTGCACAACTTTATCCAGAGTATCTTCTCCTCTATTGACCTACGTGACCGCCAGGGATCAACAGTGGTGGTGGGGGGAGACGGTCGCTTTTTCAACCGAACAGCTATTGAGGTCATTGTGCAGATGGCAGCTGCCAACGGGGTGGGTCGTATGATCATTGGACACCACGGGATAATGTCCACACCAGCCATCTCCTGTGTAATCAGGAAATACAAAGCCATCGGTGGCATCATCCTCACTGCCAGCCACAACCCTGGTGGACCTGATGGAGACTTTGGCATTAAGTTCAATACTGCAAATGGAGGCCCAGCCAAGGAGGCTGTCACAAACAAGATCTTTCAGCTCAGCAGGACCATTGAGGAGTTTGCCATCTGCCCCGGAATGCAAGTGGATCTGACAACCCTGGGCAAACAGATGTTTGATCTGGAGAACAAGTTCAAACCCTTCACAGTGGAAATTGTAGACTCTGTGGAATCCTATGCTAACTTGTTGAGGAACATCTTTGACTTTGCTGCTCTGAAGGAGATTCTATCTGGTGAAAACCACATCAAGATAAGACTAGATGCCATGCATGGAGTGGTAGGACCGTATGTGAGGAGAATCCTCTGTGAGGAGCTGGGCTGCCCTACCAATTCTGCCGTCAACTGTGTCCCATTGGAGGACTTTGGGGGCCAACACCCAGATCCTAACCTCACCTATGCTGCAGATCTGGTTGACAGTATGAAAGAAGGACAGTATGATTTTGGTGCAGCATTCGATGGTGATGGGGACCGTAACATGATCCTTGGTAAACACGGCTTCTTCGTCGCCCCACCTGACTCTGTGGCTGTGATTGCTGACAACATCTTCTGCATCCCATACTTCCAGCATACAGGGGTGAGAGGCTTCGCCCGCAGCATGCCCACAAGCGCAGCCTTAGACAGAGTAGCCAAGGCAACAAAAATAGAGTTATATGAAACTCCCACTGGGTGGAAGTTCTTTGGGAACCTGATGGATGCAGGCAGACTGTCTTTGTGTGGAGAGGAAAGCTTTGGTACAGGTGGAGACCATATTCGTGAGAAGGATGGGCTTTGGGCCGTGCTGGCATGGCTGTCCATCCTGGCCACTAGAAGGCAGAGTGTGGAGGATATTCTAAAGGACCACTGGCTAAAATATGGAAGAAACTACTTCACCAGATATGACTATGAGAACGTAGACATAGATGCAGCCTGTGAGATGATGGAGGATTTGGAGATTCTGATCGCCGGAAAGTCCTTTGTGAAGCAGAGATTTGCTGTGGGGGACAAGATCTACCAAGTGGAAAAAGCAGACAACTTTGAGTACACAGATCCGGTAGACAGCACCATTTCCAGGAACCAGGGTCTGCGGATAATCTTCTCTGATGGTTCTCGAATCATCTACAGACTCAGTGGGACAGGTAGTGATGGGGCGACAGTTCGAATCTACATAGACAGCTATGAGAAGGAGCAAATCTTTGAAGACACGCAGGTGATGCTGGCACCCCTGGCAACCATCGCTCTGAAGATTTCCCAGCTCCATCACAGGACGGGTCGAAGTGGCCCATCAGTCATCACATGATTCCTGACATATGTTGCTCCATCATTGCAATCAAGTAATctcccttttgtttttctttccagaTTTTTGTACAAACTGAGCTTCAATTCCAATTGTAGCTGCACAACATGCAATAGTTTGCATTTTAGGCTAAAATATATTCAGTGATTTTATCTGTTCCACATTaaactgctttttattttttgggtca
>XM_039814541.1
ACGTGACCGCCAGGGATCAACAGTGGTGGTGGGGGGAGACGGTCGCTTTTTCAACCGAACAGCTATTGAGGTCATTGTGCAGATGGCAGCTGCCAACGGGCACCAGTAATGAGCTCTCCATGGCCCCAGAGTTTAAATTACATAACCTTTGAGATTCTGATGCTTTCTTCATAGGATGGTTAGATGGATAAAAATACACTTGCAAATAATATAACTTGCTCTTGATGTGCCATGATAACTGTCATCCATTAACTGAAAGTCTAGTCCCAATTACTTTGAGAAGGAAGCATGCACACACCAAACCTGATATTCAGTGTTAATCCCTCCCTTCACCCACTCAGATAAATTAGGATACACACTCATGCCAgccaactcacacacacacacacgcacctgtGTGACATTTTCTCAGGTGGGTCGTATGATCATTGGACACCACGGGATAATGTCCACACCAGCCATCTCCTGTGTAATCAGGAAATACAAAGCCATCGGTGGCATCATCCTCACTGCCAGCCACAACCCTGGTGGACCTGATGGAGACTTTGGCATTAAGTTCAATACTGCAAATGGAGGCCCAGCCAAGGAGGCTGTCACAAACAAGATCTTTCAGCTCAGCAGGACCATTGAGGAGTTTGCCATCTGCCCCGGAATGCAAGTGGATCTGACAACCCTGGGCAAACAGATGTTTGATCTGGAGAACAAGTTCAAACCCTTCACAGTGGAAATTGTAGACTCTGTGGAATCCTATGCTAACTTGTTGAGGAACATCTTTGACTTTGCTGCTCTGAAGGAGATTCTATCTGGTGAAAACCACATCAAGATAAGACTAGATGCCATGCATGGAGTGGTAGGACCGTATGTGAGGAGAATCCTCTGTGAGGAGCTGGGCTGCCCTACCAATTCTGCCGTCAACTGTGTCCCATTGGAGGACTTTGGGGGCCAACACCCAGATCCTAACCTCACCTATGCTGCAGATCTGGTTGACAGTATGAAAGAAGGACAGTATGATTTTGGTGCAGCATTCGATGGTGATGGGGACCGTAACATGATCCTTGGTAAACACGGCTTCTTCGTCGCCCCACCTGACTCTGTGGCTGTGATTGCTGACAACATCTTCTGCATCCCATACTTCCAGCATACAGGGGTGAGAGGCTTCGCCCGCAGCATGCCCACAAGCGCAGCCTTAGACAGAGTAGCCAAGGCAACAAAAATAGAGTTATATGAAACTCCCACTGGGTGGAAGTTCTTTGGGAACCTGATGGATGCAGGCAGACTGTCTTTGTGTGGAGAGGAAAGCTTTGGTACAGGTGGAGACCATATTCGTGAGAAGGATGGGCTTTGGGCCGTGCTGGCATGGCTGTCCATCCTGGCCACTAGAAGGCAGAGTGTGGAGGATATTCTAAAGGACCACTGGCTAAAATATGGAAGAAACTACTTCACCAGATATGACTATGAGAACGTAGACATAGATGCAGCCTGTGAGATGATGGAGGATTTGGAGATTCTGATCGCCGGAAAGTCCTTTGTGAAGCAGAGATTTGCTGTGGGGGACAAGATCTACCAAGTGGAAAAAGCAGACAACTTTGAGTACACAGATCCGGTAGACAGCACCATTTCCAGGAACCAGGGTCTGCGGATAATCTTCTCTGATGGTTCTCGAATCATCTACAGACTCAGTGGGACAGGTAGTGATGGGGCGACAGTTCGAATCTACATAGACAGCTATGAGAAGGAGCAAATCTTTGAAGACACGCAGGTGATGCTGGCACCCCTGGCAACCATCGCTCTGAAGATTTCCCAGCTCCATCACAGGACGGGTCGAAGTGGCCCATCAGTCATCACATGATTCCTGACATATGTTGCTCCATCATTGCAATCAAGTAATctcccttttgtttttctttccagaTTTTTGTACAAACTGAGCTTCAATTCCAATTGTAGCTGCACAACATGCAATAGTTTGCATTTTAGGCTAAAATATATTCAGTGATTTTATCTGTTCCACATTaaactgctttttattttttgggtca
>XM_039814542.1
AACAGTGGTGGTGGGGGGAGACGGTCGCTTTTTCAACCGAACAGCTATTGAGGTCATTGTGCAGATGGCAGCTGCCAACGGGGCCCAGCCAAGGAGGCTGTCACAAACAAGATCTTTCAGCTCAGCAGGACCATTGAGGAGTTTGCCATCTGCCCCGGAATGCAAGTGGATCTGACAACCCTGGGCAAACAGATGTTTGATCTGGAGAACAAGTTCAAACCCTTCACAGTGGAAATTGTAGACTCTGTGGAATCCTATGCTAACTTGTTGAGGAACATCTTTGACTTTGCTGCTCTGAAGGAGATTCTATCTGGTGAAAACCACATCAAGATAAGACTAGATGCCATGCATGGAGTGGTAGGACCGTATGTGAGGAGAATCCTCTGTGAGGAGCTGGGCTGCCCTACCAATTCTGCCGTCAACTGTGTCCCATTGGAGGACTTTGGGGGCCAACACCCAGATCCTAACCTCACCTATGCTGCAGATCTGGTTGACAGTATGAAAGAAGGACAGTATGATTTTGGTGCAGCATTCGATGGTGATGGGGACCGTAACATGATCCTTGGTAAACACGGCTTCTTCGTCGCCCCACCTGACTCTGTGGCTGTGATTGCTGACAACATCTTCTGCATCCCATACTTCCAGCATACAGGGGTGAGAGGCTTCGCCCGCAGCATGCCCACAAGCGCAGCCTTAGACAGAGTAGCCAAGGCAACAAAAATAGAGTTATATGAAACTCCCACTGGGTGGAAGTTCTTTGGGAACCTGATGGATGCAGGCAGACTGTCTTTGTGTGGAGAGGAAAGCTTTGGTACAGGTGGAGACCATATTCGTGAGAAGGATGGGCTTTGGGCCGTGCTGGCATGGCTGTCCATCCTGGCCACTAGAAGGCAGAGTGTGGAGGATATTCTAAAGGACCACTGGCTAAAATATGGAAGAAACTACTTCACCAGATATGACTATGAGAACGTAGACATAGATGCAGCCTGTGAGATGATGGAGGATTTGGAGATTCTGATCGCCGGAAAGTCCTTTGTGAAGCAGAGATTTGCTGTGGGGGACAAGATCTACCAAGTGGAAAAAGCAGACAACTTTGAGTACACAGATCCGGTAGACAGCACCATTTCCAGGAACCAGGGTCTGCGGATAATCTTCTCTGATGGTTCTCGAATCATCTACAGACTCAGTGGGACAGGTAGTGATGGGGCGACAGTTCGAATCTACATAGACAGCTATGAGAAGGAGCAAATCTTTGAAGACACGCAGGTGATGCTGGCACCCCTGGCAACCATCGCTCTGAAGATTTCCCAGCTCCATCACAGGACGGGTCGAAGTGGCCCATCAGTCATCACATGATTCCTGACATATGTTGCTCCATCATTGCAATCAAGTAATctcccttttgtttttctttccagaTTTTTGTACAAACTGAGCTTCAATTCCAATTGTAGCTGCACAACATGCAATAGTTTGCATTTTAGGCTAAAATATATTCAGTGATTTTATCTGTTCCACATTaaactgctttttattttttgggtca

Function

NR:

description
PREDICTED: phosphoglucomutase-1-like

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0016868 intramolecular transferase activity, phosphotransferases molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814540.1 False 2012 mRNA 0.48 11 14422482 14429558
XM_039814541.1 True 2039 mRNA 0.47 11 14422482 14429273
XM_039814542.1 False 1546 mRNA 0.48 10 14422482 14429255

Neighbor

gene id symbol gene type direction distance location
LOC120568976 leprot coding downstream 2285 14416830 ~ 14420197 (-)
LOC120568103 pde4b,LOC104954895,LOC101483836,LOC100690322,LOC102791018 coding downstream 7782 14355617 ~ 14414700 (-)
fzr1b LOC104927424,LOC102292505,LOC103364951,LOC102791500,LOC101485033 coding downstream 72923 14339669 ~ 14349559 (-)
LOC120568148 NA coding downstream 91891 14321679 ~ 14330591 (-)
LOC120568246 lrrc52,LOC102792645 coding downstream 109672 14304478 ~ 14312810 (-)
LOC120568914 LOC104950559 coding upstream 531 14430089 ~ 14436206 (-)
LOC120568348 lrp8 coding upstream 31914 14461472 ~ 14537465 (-)
LOC120567737 NA coding upstream 121479 14551037 ~ 14553669 (-)
LOC120567803 LOC104934906,LOC103364073,LOC103479012 coding upstream 131949 14561507 ~ 14564705 (-)
scp2a scp2 coding upstream 196609 14626167 ~ 14651376 (-)
G114518 NA non-coding downstream 101719 14319343 ~ 14320763 (-)
LOC120568036 NA non-coding downstream 251008 14124703 ~ 14171474 (-)
G114456 c8a non-coding downstream 366959 14049494 ~ 14055523 (-)
LOC120567953 NA non-coding downstream 474367 13942055 ~ 13948115 (-)
G114257 NA non-coding downstream 793815 13625776 ~ 13628667 (-)
G114538 LOC104949927,LOC103364340 non-coding upstream 11323 14440881 ~ 14447933 (-)
G114544 NA non-coding upstream 87918 14517476 ~ 14517893 (-)
G114633 NA non-coding upstream 259899 14689457 ~ 14690066 (-)
G114636 NA non-coding upstream 264074 14693632 ~ 14693957 (-)
G114661 NA non-coding upstream 321687 14751245 ~ 14751528 (-)
tfr1a NA other downstream 453671 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 940257 13469531 ~ 13482225 (-)
G114152 NA other downstream 1333919 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 1447154 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 1653857 12760748 ~ 12768625 (-)
LOC120568687 NA other upstream 184055 14613613 ~ 14618224 (-)
G114680 NA other upstream 366360 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 860524 15290082 ~ 15304610 (-)
G115164 btf3l4 other upstream 1714602 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 1753096 16182654 ~ 16201698 (-)

Expression


Co-expression Network