LOC120567629


Basic Information

Item Value
gene id LOC120567629
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 21016902 ~ 21019325 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814545.1
AACCTGAACACTAAAACCCTGTGTGGCTGACAGAGAAACCAGTCATGGGACTGCTGCTGCCGATTCTTCTTGGCTTTCTTGCTGCTCTGATTGGAGGGCTATACCTTCTCGGGGTGTTTCGACAGCGGCGACTAGGAGAACCCCCTTTGGATAAGGGGCTCATTCCCTGGCTGGGTCATGTCTTAGAGTTTCGCAGGAACACATTTAAGTTCCTAGAGAGGATGAAGCAAAAACACGGTGATGTGTTCACAGTACAGCTGGGAGGGTATTACTTTACATTCCTTCAGGACCCTCTATCGTTTGGATCATTTGTTAAGGAGAGTCGAGAAAAACTGGACTTCAGGAAGTTTTCTGTGCAGCTGGTGCGCAGAGTGTTTGGTTACACTGCTTTAGAAAACGAACACATCGTTCTCCAGATGAACAGCAACAAGCATCTACAGGGGGCTGGACTGGAGGCAATGACTCAATCCATGATGAGTAATTTGCAGAACCTGATGTTGCACAACATTGGCTCACCTGCAGACCAAAGAACCTGGACGGAGGATGGACTGTTTATGTACTGCTACAATATTGTTTTCAGGGCTGGCTACTTATCTCTATATGGCAATGAGCCACACAAGTCAGAAGGAAGTGAGGAGAAAGACAGAGCTGAATCAGAagccttattttacgagtttcGTAAATATGACCAACTCTTCCCCAGGTTTGCTTATGGGGTCCTGCCACCAAGGGAAAGGTTGGAAGCACAGAGGCTCCTGGGACTCTTCTGGAAAGCTCTGTCAATTCAGAAGATGAAGACCAAGGAAAACATCAGTCGCTGGGTGTGGGACATCCAGCAAGGCAAAGAGGAGATAGGTATAAAGGAATCAATGATAGACAGGTACATGTTTGTGCTTCTTTGGGCCTCTCAGGGCAACACAGGGCCTTCTTCATTCTggctgctcctcttcctcatgaAAAACTCAGAAGCCATGGCAGCAGTAAAGGAAGAGGTAAATACGGTCTTGAAGGAATTTGGGCAAGAAGTCCGACATGGTGGCCCTTTAATCAACCTCACCCGTGAAATGCTGATGAAAACACCAATCCTGGACAGTGTTGTGGAAGAGACCCTCCGACTCACTGCTGCACCCCTCCTCACCAGAGCAGTGATTCAGGATATGACTCTCAAGATGGCTGATGGGCGGGAATACTTGATCCGCAAGGGAGACAGAATGGCAGTCTTTCCTTACATTGCCATTCAAACTGACCCAGAGATCCACTCTGACCCACATTCATTCAAATATGACCGCTTTCTCAATCCAGACAGGAgcaagaaaacacatttttacaaagcAGGGAAGAAGGTGAAGTTTTACAACATGCCCTGGGGGGCCGGGGTCTCCATGTGCCCTGGGCGTTTCTTTGCCACCAATGAGCTGAAGCAGTTTGTTTTCCTCATGTTGGTTTATTTTGAGTTTGAGCTGAAGAATCCTGATGAGAAGATACCTGAGATGGACTTCAGTCGATGGGGCTTTGGAACGATGCAACCTGACAGAGACATTCAGTTCCGATACAGACTCAAATATTAAACTAATCAATCGTTTTCTGACAAAGTGTTTTCTGATTTTGATCATCTCTGCACATTTGACAATTATGTAGGAAACATGAGATTCCACAACGAAGTATTGTTTTTATCTCCATACCAGTAATGTGATAAGCACATTATGAATGTGGCTTTAAAACttgtgttttaatatttttgtgtATAACTATATTGTCAACCATATTATAAATAAGAACTACAATCAATTCCCTCCAGTTGTACTATGCACAAATACACtactatttttatattttgaacacTTTATTATGAATATAGCTCCCTCTCTCTTGTGAATCACTAATCAGAGAGCAGTTCATTCTAGTCAACAATAATTCAGTAATCTTTGTATAAACAGTTAGTTTAATAGAATATTGTGAATATTATGGCTGCTTCTTtgcacagcttttttttttttacagtatgatATCATTTCTAGCAGGTGTTGTACTTTAAAGTGTTGTCTAATAATTACTTCcaagacaaaaataaattagaTGAGCTTCAGATGCTAACATTTTGAGGGTTGGGACTAGTTAACATTACttgttaaatataatgtaaatgtCTATATATGGATGAGAAACTAAAAAGAAGTAGAAAAAGCTGAGAAGCCATTGCTCTGTCATCATGATGTTAGTTAATAATTTGTTCAACAAAAATACTTCTCTGTTTGTGTAACCTTAAGAGGGCCAGCGTTAGGTGTGGGAGGTGTGGGCACCTGTTAGCTATACTTATGGCTTGTTAATTAACATGATTATGCTAAAATGTTTGTgagtttttagatttttttcaatCTGTAATAAAGCCTTCATTTgaccaaaataacaaaatattataTTTCA

Function

GO: NA

KEGG:

id description
K07431 CYP8B1; sterol 12-alpha-hydroxylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814545.1 True 2424 mRNA 0.41 1 21016902 21019325

Neighbor

gene id symbol gene type direction distance location
pth1r pth1r coding upstream 33293 20935435 ~ 20983609 (+)
usp14 usp14,LOC102778130 coding upstream 224403 20782255 ~ 20792499 (+)
rock1 rock1 coding upstream 237157 20741261 ~ 20779745 (+)
abhd3 abhd3 coding upstream 327272 20677357 ~ 20689630 (+)
npc1 npc1 coding upstream 493363 20507410 ~ 20523539 (+)
gjc2 gjc2 coding downstream 7175 21026500 ~ 21045564 (+)
iba57 iba57 coding downstream 29029 21048354 ~ 21051342 (+)
snap47 snap47 coding downstream 34056 21053381 ~ 21059750 (+)
wnt3a wnt3a coding downstream 144395 21163720 ~ 21178831 (+)
arf1 arf1 coding downstream 172973 21192298 ~ 21195757 (+)
G116514 NA non-coding upstream 135906 20880692 ~ 20880996 (+)
G116507 NA non-coding upstream 188667 20827876 ~ 20828235 (+)
G116465 NA non-coding upstream 317693 20696904 ~ 20699209 (+)
G116464 NA non-coding upstream 320429 20693420 ~ 20696473 (+)
G116463 NA non-coding upstream 323761 20692887 ~ 20693141 (+)
G116538 NA non-coding downstream 2306 21021631 ~ 21030496 (+)
G116583 wnt9a non-coding downstream 110283 21129608 ~ 21134012 (+)
G116616 NA non-coding downstream 224316 21243641 ~ 21244393 (+)
G116657 NA non-coding downstream 251426 21270751 ~ 21326263 (+)
G116723 NA non-coding downstream 435005 21454330 ~ 21500394 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other upstream 101580 20882617 ~ 20915322 (+)
LOC120567833 gbg5 other upstream 641269 20373227 ~ 20375633 (+)
emilin2a NA other upstream 1551521 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 1964660 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 2291455 18720365 ~ 18725447 (+)
LOC120568354 NA other downstream 851628 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 1588724 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 1622185 22641510 ~ 22681293 (+)
kdsr kdsr,LOC102792240 other downstream 2414300 23433625 ~ 23440843 (+)
LOC120567964 dpp6,LOC100710983 other downstream 2573407 23592732 ~ 23685804 (+)

Expression


Co-expression Network