Gene
RNA
| Item | Value |
|---|---|
| gene id | iba57 |
| gene name | iba57 |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 21048354 ~ 21051342 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| iba57 | Acts upstream of or within heme biosynthetic process. Is expressed in intermediate cell mass of mesoderm. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 74 and multiple mitochondrial dysfunctions syndrome 3. Orthologous to human IBA57 (iron-sulfur cluster assembly factor IBA57). |
| description |
|---|
| PREDICTED: putative transferase CAF17, mitochondrial |
| id | name | namespace |
|---|---|---|
| GO:0006783 | heme biosynthetic process | biological_process |
| GO:0006546 | glycine catabolic process | biological_process |
| GO:0032259 | methylation | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0004047 | aminomethyltransferase activity | molecular_function |
| id | description |
|---|---|
| K22073 | IBA57; transferase CAF17, mitochondrial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039814554.1 | True | 1551 | mRNA | 0.46 | 3 | 21048354 | 21051342 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gjc2 | gjc2 | coding | upstream | 2790 | 21026500 ~ 21045564 (+) |
| LOC120567629 | NA | coding | upstream | 29029 | 21016902 ~ 21019325 (+) |
| pth1r | pth1r | coding | upstream | 64745 | 20935435 ~ 20983609 (+) |
| usp14 | usp14,LOC102778130 | coding | upstream | 255855 | 20782255 ~ 20792499 (+) |
| rock1 | rock1 | coding | upstream | 268609 | 20741261 ~ 20779745 (+) |
| snap47 | snap47 | coding | downstream | 2039 | 21053381 ~ 21059750 (+) |
| wnt3a | wnt3a | coding | downstream | 112378 | 21163720 ~ 21178831 (+) |
| arf1 | arf1 | coding | downstream | 140956 | 21192298 ~ 21195757 (+) |
| guk1a | guk1,LOC107100458 | coding | downstream | 149375 | 21200717 ~ 21208684 (+) |
| abcb8 | abcb8,LOC103375355,LOC102789860 | coding | downstream | 233810 | 21285152 ~ 21290501 (+) |
| G116538 | NA | non-coding | upstream | 17858 | 21021631 ~ 21030496 (+) |
| G116529 | NA | non-coding | upstream | 19372 | 20949004 ~ 21028982 (+) |
| G116514 | NA | non-coding | upstream | 167358 | 20880692 ~ 20880996 (+) |
| G116507 | NA | non-coding | upstream | 220119 | 20827876 ~ 20828235 (+) |
| G116465 | NA | non-coding | upstream | 349145 | 20696904 ~ 20699209 (+) |
| G116583 | wnt9a | non-coding | downstream | 78266 | 21129608 ~ 21134012 (+) |
| G116616 | NA | non-coding | downstream | 192299 | 21243641 ~ 21244393 (+) |
| G116657 | NA | non-coding | downstream | 219409 | 21270751 ~ 21326263 (+) |
| G116723 | NA | non-coding | downstream | 402988 | 21454330 ~ 21500394 (+) |
| G116746 | NA | non-coding | downstream | 562758 | 21614100 ~ 21662470 (+) |
| LOC120568904 | crhr2,LOC101476678,LOC102776588 | other | upstream | 133032 | 20882617 ~ 20915322 (+) |
| LOC120567833 | gbg5 | other | upstream | 672721 | 20373227 ~ 20375633 (+) |
| emilin2a | NA | other | upstream | 1582973 | 19447011 ~ 19465381 (+) |
| LOC120568770 | NA | other | upstream | 1996112 | 19017039 ~ 19052242 (+) |
| LOC120568911 | NA | other | upstream | 2322907 | 18720365 ~ 18725447 (+) |
| LOC120568354 | NA | other | downstream | 819611 | 21870953 ~ 21897391 (+) |
| LOC120567968 | NA | other | downstream | 1556707 | 22608049 ~ 22620131 (+) |
| LOC120568311 | LOC103368946,LOC103142996,LOC106925933,LOC104929332 | other | downstream | 1590168 | 22641510 ~ 22681293 (+) |
| kdsr | kdsr,LOC102792240 | other | downstream | 2382283 | 23433625 ~ 23440843 (+) |
| LOC120567964 | dpp6,LOC100710983 | other | downstream | 2541390 | 23592732 ~ 23685804 (+) |
