LOC120567661


Basic Information

Item Value
gene id LOC120567661
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 20348509 ~ 20351231 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814620.1
GCTCGGAGTGAATAAAAGGAGATGGGGACTccaaaagagggagagaaagaactCGTCGACTCACTGCCAGGTCTTGTGTTTAATAGAGAGTTTATTTTTCACTCAGGAAAGATTTTACTCCTAAAAATTACTTTAACTTCTGAAGATGTGGAAAGCCTTTGTGATTCTCTGCGTTACACTGGTGTCAGCCTCATGTCCAAAGGACTGTCAATGTCCCCCTGACAACCCCAGATGTGCAGCTGGAGTCAGTCTCGTGCTGGATGGATGTGGATGCTGTAAAGTTTGTGCACGGCAGCTCTTTGAAGACTGCAGCCAGACACAGCCGTGTGACCACACAAAGGGACTGGAGTGCAACTTTGGAGGGGGATATGGCTCGTCTAAGGGCATCTGTCGAGCAGCCAAATCAGATGGAAGAACATGTGAGTACAACAACAAGATTTACCAGAATGGGGAAATATTCCGGCCAAACTGCAAATACCAGTGCACTTGCATGGACGGTGCTGTTGGATGTGTCTCCCTCTGCCCACATCAACTCACGCTGCCCAAAATGGGCTGTGCCAAGCCCAAGCGGGTCAAGGTGCAGGGACGGTGCTGTGAACAACTCGTCTGCCCTGAGGAGGCAAAGACAGAGAGCTCTGTGGTgaagaaacacagaaaaaagcaagacaaaaaCAGACCGTCTGAAGACGACCTTACCAACAAGAACGAGCTGGCTCCTGTGTGGCGAGGAGAATCAAATTCATTACCTGCTTTCCGGAGTCACCCAATAGGCCACGTGTTGGTGAGAGGAGTCGAGTGTGTGTCTCAAACCACAGCTTGGTCACCGTGCTCCAAATCCTGTGGCACTGGAGTATCCACCAGGGTGACCAACAGCAACACTCAGTGCAAACTGGTGAAAGAGACTCGGATCTGTGAAGTCCGACCATGCAACCAAAACACCTTTACCAGATTGAAGaaaggtcagaAATGTAACCACATAGAAAAGGCCAGCCGTCCAGTTAAACTGTCCCACGCAGGCTGCCGTAGCCTGAAAAAGTTCCAACCGAGGTACTGTGGGTCCTGCTCTGATGGCCAATGCTGCAGGCCTCACCGAACCCAGACGGTTCCTGTCCACTTCCGATGCAAACATGGAGAGATCATCAGcaggatggtgatgatgattgaGTCTTGCAAATGTAACTTAAACTGCAATAGCAGCAATGAAAAGACTCCTGCCCGTTACGGACTTTTGAACGATATTCAtaaactgaaaatgtaaagttcTGAACAGAAGACCCCTTAAGTGTTGGCTGatgataataattaaaaaagtgCACTTTGAGGTTGCAGACATCTGCAGGAGGAATTTCTTGAACTGTATTGTTCATAAGTTTGCTTCATAACATTGGAGCCTTGTGGTTTGCTTCTTTTTGAAGCTGTCTTTTTAACATTGTGAAAATTCTTATTTTTCTagtttaaatttttattttatttgatacaCATAAATAACATATTGACAAGACATGAAGCATGACAACATGACATTAATGACTGTAAATACTATGGCAGCTACTAAATCCGTCATATGTCGCCATGTTTCTGTTGATTCACTGTATAAGGCATAATACTTCATACTTCACTAATTGTTATGCTTAATCATGGATATTGTACAATAATATTGGTTTGAAATCTTCTTGCCtatgtaaaatgttttaatataacTTAAGGCTGGAAATATACTGTACTCTGCATGTATCTTGGCCAATTAACTGCATAATTGTCAATTTGatgttttaatttttcaaaaataaaacataaaacactgcagtttttcatttaa
>XM_039814622.1
GCTCGGAGTGAATAAAAGGAGATGGGGACTccaaaagagggagagaaagaactCGTCGACTCACTGCCAGGTCTTGTGTTTAATAGAGAGTTTATTTTTCACTCAGGAAAGATTTTACTCCTAAAAATTACTTTAACTTCTGAAGATGTGGAAAGCCTTTGTGATTCTCTGCGTTACACTGGTGTCAGCCTCATGTCCAAAGGACTGTCAATGTCCCCCTGACAACCCCAGATGTGCAGCTGGAGTCAGTCTCGTGCTGGATGGATGTGGATGCTGTAAAGTTTGTGCACGGCAGCTCTTTGAAGACTGCAGCCAGACACAGCCGTGTGACCACACAAAGGGACTGGAGTGCAACTTTGGAGGGGGATATGGCTCGTCTAAGGGCATCTGTCGAGCCAAATCAGATGGAAGAACATGTGAGTACAACAACAAGATTTACCAGAATGGGGAAATATTCCGGCCAAACTGCAAATACCAGTGCACTTGCATGGACGGTGCTGTTGGATGTGTCTCCCTCTGCCCACATCAACTCACGCTGCCCAAAATGGGCTGTGCCAAGCCCAAGCGGGTCAAGGTGCAGGGACGGTGCTGTGAACAACTCGTCTGCCCTGAGGAGGCAAAGACAGAGAGCTCTGTGGTgaagaaacacagaaaaaagcaagacaaaaaCAGACCGTCTGAAGACGACCTTACCAACAAGAACGAGCTGGCTCCTGTGTGGCGAGGAGAATCAAATTCATTACCTGCTTTCCGGAGTCACCCAATAGGCCACGTGTTGGTGAGAGGAGTCGAGTGTGTGTCTCAAACCACAGCTTGGTCACCGTGCTCCAAATCCTGTGGCACTGGAGTATCCACCAGGGTGACCAACAGCAACACTCAGTGCAAACTGGTGAAAGAGACTCGGATCTGTGAAGTCCGACCATGCAACCAAAACACCTTTACCAGATTGAAGaaaggtcagaAATGTAACCACATAGAAAAGGCCAGCCGTCCAGTTAAACTGTCCCACGCAGGCTGCCGTAGCCTGAAAAAGTTCCAACCGAGGTACTGTGGGTCCTGCTCTGATGGCCAATGCTGCAGGCCTCACCGAACCCAGACGGTTCCTGTCCACTTCCGATGCAAACATGGAGAGATCATCAGcaggatggtgatgatgattgaGTCTTGCAAATGTAACTTAAACTGCAATAGCAGCAATGAAAAGACTCCTGCCCGTTACGGACTTTTGAACGATATTCAtaaactgaaaatgtaaagttcTGAACAGAAGACCCCTTAAGTGTTGGCTGatgataataattaaaaaagtgCACTTTGAGGTTGCAGACATCTGCAGGAGGAATTTCTTGAACTGTATTGTTCATAAGTTTGCTTCATAACATTGGAGCCTTGTGGTTTGCTTCTTTTTGAAGCTGTCTTTTTAACATTGTGAAAATTCTTATTTTTCTagtttaaatttttattttatttgatacaCATAAATAACATATTGACAAGACATGAAGCATGACAACATGACATTAATGACTGTAAATACTATGGCAGCTACTAAATCCGTCATATGTCGCCATGTTTCTGTTGATTCACTGTATAAGGCATAATACTTCATACTTCACTAATTGTTATGCTTAATCATGGATATTGTACAATAATATTGGTTTGAAATCTTCTTGCCtatgtaaaatgttttaatataacTTAAGGCTGGAAATATACTGTACTCTGCATGTATCTTGGCCAATTAACTGCATAATTGTCAATTTGatgttttaatttttcaaaaataaaacataaaacactgcagtttttcatttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814620.1 True 1819 mRNA 0.43 5 20348509 20351231
XM_039814622.1 False 1816 mRNA 0.43 5 20348509 20351231

Neighbor

gene id symbol gene type direction distance location
ift22 ift22,LOC102787459 coding downstream 9116 20336698 ~ 20339393 (-)
atp6v0b atp6v0b,vato,LOC102788333 coding downstream 129714 20208710 ~ 20218795 (-)
b4galt2 b4galt2 coding downstream 141015 20026059 ~ 20207494 (-)
ccdc24 NA coding downstream 328248 19994125 ~ 20020261 (-)
LOC120567781 NA coding downstream 350428 19995533 ~ 19998081 (-)
pter pter coding upstream 57904 20409135 ~ 20415934 (-)
mmp16b LOC103369336 coding upstream 87236 20438467 ~ 20455878 (-)
cables1 cables1 coding upstream 181880 20533111 ~ 20558297 (-)
gata6 gata6 coding upstream 237553 20588784 ~ 20595162 (-)
mib1 mib1 coding upstream 269057 20620288 ~ 20675826 (-)
G116328 NA non-coding downstream 22635 20325649 ~ 20325874 (-)
G116292 LOC107655868,LOC106532782,LOC108241678 non-coding downstream 411096 19924212 ~ 19937413 (-)
G116293 NA non-coding downstream 466100 19879905 ~ 19882409 (-)
G116274 NA non-coding downstream 596315 19745702 ~ 19752194 (-)
G116268 NA non-coding downstream 669079 19679189 ~ 19679430 (-)
G116366 NA non-coding upstream 36267 20387498 ~ 20388062 (-)
G116368 LOC101078271 non-coding upstream 39126 20390357 ~ 20391720 (-)
LOC120568747 NA non-coding upstream 229289 20580520 ~ 20585677 (-)
G116484 rock1 non-coding upstream 417404 20768635 ~ 20771028 (-)
G116499 NA non-coding upstream 454922 20806153 ~ 20806691 (-)
xcr1b.1 NA other downstream 552750 19793342 ~ 19795759 (-)
G116138 NA other downstream 883129 19464700 ~ 19465380 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other downstream 1125783 19221791 ~ 19222726 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other downstream 1413018 18931974 ~ 18935491 (-)
G115941 NA other downstream 1502232 18844905 ~ 18846277 (-)
tmie tmie,LOC102776014 other upstream 633570 20984801 ~ 20995567 (-)
higd1a higd1a other upstream 656817 21008048 ~ 21010576 (-)
G116969 NA other upstream 1910767 22261998 ~ 22268559 (-)
LOC120569135 ttc39c,LOC102790819 other upstream 2994487 23345718 ~ 23361580 (-)
G117259 vps4b other upstream 3079135 23430366 ~ 23430992 (-)

Expression


Co-expression Network