LOC120567676 (nmnat3,LOC102233219)


Basic Information

Item Value
gene id LOC120567676
gene name nmnat3,LOC102233219
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 28250633 ~ 28270656 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814645.1
CAACCTGTTTTTCTCTGCGGAACCATCGAGCAATAGCTGCTCTGAACGGCGGAGTGGGAAGAGTGTGACACACTGACTAAACAGAATGAAAAGAAGGTTCTTTGCCACTGGTGTGAGGGGGTAAACCAACATGGCCACCCGCCGTGTTCCGCTAGTCTTGCTAGCCTGCGGCTCCTTTAATCCCATCACAAACCAGCACATGAGGCTGTTTGAGCTGGCCAGAGACCACATGCACAGCACAGGTCAGTACCAGGTGGTGGGTGGCATCGTGTCTCCAGTGAGTGACGGCTATGGGAAGCAAGGCCTGGTACTGGCAAAGCACCGAATCGCCATGGCAAAGTTGGCGCTCCAGAGCTCCAACTGGGTCacggttgatgaatgggagagcCAGCAGCCAGACTGGACGGAGACTGTGGTCACCATGAGGTATCATTATGGGCGGATTCTGGAGGAGTATGAGCAGAGCACAGGAATGCACGACGACTTCACTGGAACCACGACTCCCCTCTCAGGCCCCTGTCCCCAGTTGAAGCTCCTGTGTGGGGCCGATTTCCTCGACACTTTCAAGATCCCCGGCCTGTGGCGGGACGACCACGTGGAGGAGGTGGCCGGGCGCTTTGGCCTCGTCTGCGTCAGCCGAGGGGGGCTTCAGCCCGAGCGAGCCGTGCACGAGTCGGACACGCTCTCGCGGCAGCGTCAAAACATTTTCCTGGTGAGGGAATGGGTGAGGAACGAGACGAGCGCCACAGAGGTCCGCCGGGCTCTGAGAAGGGATCGGAGTGTGAAATACCTGATCCCAGACTCTGTGATCGAATATATTCACCAGCACAACCTCTACACGGAGGACAGCGAGAGAAGAAATAAAGGCACAGTGCTGAGGCCGCTCGCCAAACAGGCACAGCCAGTAAAGAGTCTGGATGACGCACAAGTAGCCGTCCACAGTGGACCTCGTCATCATTCACTAGGAGTAGGGAAAGCAGCAGAGCAACAAACAGCCAACATGCCAGCTGATTTGAACGGCTATTGGAAAATGATTTCCAATGATAACTTTGAGGAGTATCTGAAGGCTCTTGAAGTAAACATTGCCATCAGGAAAATCGCCACCTTGTTGAAGCCTGACAAGGACATTGTCCACGATGGGGACCACATAATCATCAAAACCCTCAGCACCTTCAAAAACTACAACATGGACTTCTATGTGGGCAAAGAGTTTGAGGAGGATCTGTCTGGAGTGGATGACAGGAAATGCATGACCACCATCAGCTGGGAGGGAGACAAGCTGGTGTGTGTGCAGAAGGGAGAGATCGGAGGAAGAGGCTGGACCCACTGGGTGGACGGAGATGAGCTTCATCTGGAGCTGAGAGCTGCAGGAGCTGTTTTTCTCTGCCCTCGTGCCCTTGGTGCCTCGCACATAAAGGCAGGAGGACACCCTGCACCTTCCCCCTCCGTACCCTGTCTAAAGTCTACACACACAACAGCGTCACCAGCTGCCAGCATGCCTGCAGACTTCAGTGGGACATGGATTCTGGAAACCAATGACAAATTTGAGGAATATTTGAAAGCGTTGAATATTGATTTTGCTACAAGGAAAATTGCCATCTCGCTGTCTCAGACCAAAGTGGTTGCCCAAGACGGAGAGAAGTTCAACTTCAAAACACTGAGCACCTTCAGGAATTATGAGCTCGCCTTCACTGTAGGGGTTGAGTTTGATGAGTGCACTAAAGGACTGGACAACAGAAATATTAAGTGTCTGGTGACCTGGGAGGGGGACAAGCTGGTGTGCACTCAGAAAGGAGAGAAGGCCAACCGTGGCTGGAAACACTGGATCGAAGGAAACAAACTCTTCCTGGAGCTGACGTGTGAAAATGTAGTTTGTGTTCAGGTATTCAAGAGAAAAGAATAAAAggctgttttctgttttcattaACTCAGTTAACAATGTCTTTATTTGTTCCTTGAGAAtatgtttttccaaatgtatgAACAAAACGAATAAAGGTGCTTTTCcgacataca

Function

symbol description
nmnat3 Predicted to enable nicotinamide-nucleotide adenylyltransferase activity and nicotinate-nucleotide adenylyltransferase activity. Predicted to be involved in NAD biosynthetic process. Predicted to act upstream of or within pyridine nucleotide biosynthetic process. Predicted to be active in mitochondrion and nucleus. Orthologous to human NMNAT3 (nicotinamide nucleotide adenylyltransferase 3).

NR:

description
PREDICTED: nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3 isoform X1

GO: NA

KEGG:

id description
K06210 NMNAT; nicotinamide mononucleotide adenylyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814645.1 True 2016 mRNA 0.52 13 28250633 28270656

Neighbor

gene id symbol gene type direction distance location
copb2 copb2,LOC101157089 coding downstream 1546 28239490 ~ 28249087 (-)
LOC120568087 dvl3,LOC103366747,LOC101468147,LOC100700965 coding downstream 12116 28221880 ~ 28238517 (-)
LOC120568085 ap2m1,ap2m1a,LOC108267679 coding downstream 29229 28206718 ~ 28221404 (-)
LOC120568084 NA coding downstream 61804 28185959 ~ 28188829 (-)
LOC120568081 LOC103372819,LOC102300262,LOC102201271,LOC101469517,LOC100690967 coding downstream 65294 28169960 ~ 28185339 (-)
LOC120568715 LOC104944837,LOC103366837,LOC102237248,LOC102197332 coding upstream 228291 28498947 ~ 28590144 (-)
LOC120568207 LOC103366836,LOC108239510,LOC100692307,LOC102787733 coding upstream 322682 28593338 ~ 28613393 (-)
LOC120567677 NA coding upstream 366396 28637052 ~ 28647533 (-)
LOC120567913 NA coding upstream 389176 28659832 ~ 28661149 (-)
LOC120568118 LOC104947936,LOC107372586,LOC107373506 coding upstream 604219 28874875 ~ 28876602 (-)
G118636 NA non-coding downstream 44392 28205711 ~ 28206241 (-)
G118632 pcyt1a,LOC104957745,LOC107091881,LOC103040438 non-coding downstream 50082 28200137 ~ 28200551 (-)
G118613 NA non-coding downstream 105599 28144428 ~ 28145034 (-)
G118608 LOC103372824 non-coding downstream 150823 28095023 ~ 28099810 (-)
G118504 NA non-coding downstream 585921 27627886 ~ 27664712 (-)
G118668 NA non-coding upstream 200311 28470967 ~ 28473620 (-)
G118671 NA non-coding upstream 210983 28481639 ~ 28481897 (-)
G118678 NA non-coding upstream 386005 28656661 ~ 28657022 (-)
LOC120568122 NA non-coding upstream 427438 28698094 ~ 28699197 (-)
G118698 NA non-coding upstream 472304 28742960 ~ 28743235 (-)
metap1d metap1d,LOC102783095 other downstream 97863 28146271 ~ 28152770 (-)
G118524 NA other downstream 531874 27713467 ~ 27718759 (-)
LOC120568986 epha4,LOC100711706 other downstream 575273 27643327 ~ 27675360 (-)
cirbpa cirbp other downstream 1426063 26819838 ~ 26824570 (-)
G118175 NA other downstream 1584681 26661621 ~ 26665952 (-)
G118764 NA other upstream 715435 28986091 ~ 28986319 (-)
G118856 NA other upstream 1149723 29420379 ~ 29420652 (-)
LOC120567741 NA other upstream 1365447 29636103 ~ 29649792 (-)
LOC120568429 LOC106574020,LOC106613541,LOC103366013 other upstream 2170233 30440889 ~ 30477185 (-)
LOC120568929 NA other upstream 2593590 30864246 ~ 30876111 (-)

Expression


Co-expression Network