LOC120567680 (LOC107752212,LOC107675959,LOC107679452)


Basic Information

Item Value
gene id LOC120567680
gene name LOC107752212,LOC107675959,LOC107679452
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 29191093 ~ 29192158 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814648.1
AATGTTTATAATTAAATTTCAGGTACCACAACGGTCCAGGAGCCAGGTAAAATTATCGCCACCAAGGGGAAGCGCCAGGTCGGTGCAGTGACCTCTGGGGAAAGGGGGACATTGGTCACCATTGCCCTTGCTGTTAATGCACAAGGCAGTTGCATTCCCCCGTATTTCATCTTTCCCAGGAAGAAGTTCCAGGACCACTTTGTGAGGAATGGTCCCATCGGCTCTACTGGTTCTGCTAATAGTTCAGGTTGGATGCATGATGTtgactttctttcctttcttcagCACTTCGCCAGACACACCCGTGTAAACCTGGAGTCGAAGGTGCTGCTCCTCCTTGACAATCACTGGTCACACCTTTCTGTGGCAGCAATTGACTTTTGTCGGTCAAACGGCATAGTCCTCCTATCTTTCCCACCCCACTGCTCACATCGTCTCCAGCCGCTCGACAGGAGTGTGTTCGGTCCACTAAAGCGATATGTTAACGCCGCAGCAGATCACTGGATGAGAACACACCCTGGAAAAACGTTGACCATATACGACATCCCAATCCTAGTGGCCACAGCTCTGCCACGTGCAGCTACACCCAGCAACATCACATCTGGCTTTGTGTGCACTGGCATCTGTCCTTTCAACCCAGATATTTTTGAGGAGCAAGACTTTTCACCTGCATATGTCACTGACCGCCCAGTTCCATGTGTAGGCCTACCATGTGCTCCCACACCACATTCTGACACAAACCCATACAGCCAGAGCCTATTTGAGGGAGGACGGCTGCCAGAGTATCCTGCTGGTTCAACCAGGGATACCATCCCTGACCACCCAACTGTCAGTTCAGCTGTCCCTCCTGAAGAAAGGGGAAGTCCATGTCTGTTCATTCCAGAAGCTGTACGTCCCTTCCCCAAGGCTGGTCTGAGAAAGGACACAAAACGGAGAGGCAAAAGGAGGTGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107752212 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814648.1 True 951 mRNA 0.51 2 29191093 29192158

Neighbor

gene id symbol gene type direction distance location
LOC120567679 NA coding upstream 18081 29171045 ~ 29173012 (+)
LOC120567801 NA coding upstream 113679 29075017 ~ 29077414 (+)
LOC120568117 LOC107731850,LOC107684960,LOC107572523 coding upstream 244110 28944546 ~ 28946983 (+)
LOC120568119 NA coding upstream 297881 28880645 ~ 28893212 (+)
clstn2a LOC102305044,LOC102198559,LOC100692037,LOC101467236,LOC102787137 coding upstream 717548 28273667 ~ 28473545 (+)
LOC120567681 LOC107104891 coding downstream 2930 29195088 ~ 29196362 (+)
LOC120567682 NA coding downstream 42525 29234683 ~ 29235988 (+)
LOC120567683 NA coding downstream 61236 29253394 ~ 29254676 (+)
si:ch73-257c13.2 NA coding downstream 124062 29316220 ~ 29318818 (+)
LOC120568652 NA coding downstream 323982 29516140 ~ 29546049 (+)
G118800 NA non-coding upstream 12134 29178729 ~ 29178959 (+)
G118792 NA non-coding upstream 16630 29174212 ~ 29174463 (+)
G118791 NA non-coding upstream 21128 29169759 ~ 29169965 (+)
G118762 NA non-coding upstream 216505 28974201 ~ 28974588 (+)
G118752 NA non-coding upstream 237538 28952681 ~ 28953555 (+)
G118802 NA non-coding downstream 28202 29220360 ~ 29220751 (+)
G118839 NA non-coding downstream 153344 29345502 ~ 29345703 (+)
G118859 NA non-coding downstream 274102 29466260 ~ 29466603 (+)
G118881 NA non-coding downstream 326592 29518750 ~ 29520622 (+)
G118880 NA non-coding downstream 330955 29523113 ~ 29525489 (+)
LOC120568082 LOC101159534,LOC103372818,LOC101069325 other upstream 1021123 28156801 ~ 28169970 (+)
LOC120568664 NA other upstream 1485882 27704001 ~ 27705211 (+)
LOC120568838 LOC103364371,LOC102207447,LOC101475014 other upstream 1581375 27602000 ~ 27609718 (+)
gpr35b NA other upstream 1791697 27394523 ~ 27399396 (+)
LOC120569025 NA other upstream 2008373 27179097 ~ 27182720 (+)
LOC120567689 NA other downstream 771257 29963415 ~ 29969913 (+)
LOC120568595 sdr16c5 other downstream 1376937 30569095 ~ 30677352 (+)
G119114 NA other downstream 1973068 31165226 ~ 31203586 (+)
G119123 NA other downstream 2006802 31198960 ~ 31235565 (+)
G119257 NA other downstream 2267706 31459864 ~ 31460908 (+)

Expression


Co-expression Network