si:ch211-153l6.6 (LOC102313061,LOC101473329)



Basic Information


Item Value
gene id si:ch211-153l6.6
gene name LOC102313061,LOC101473329
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 29553459 ~ 29586063 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039814653.1
ATGCGTCCGTCCTCGCGCCAGCGGGTGGCCGCCTGGCTGCTCGCGCTGTCGTTGGGGAGAGGCGGAGAGGAATGCGCGCGCCGCGGCCGCCTGGAGATGATCTCGTTTTGGCTGCTGTGCTGGAAGCTGTTGAGAGCAACAGCTGGGCTAGGGAGGACAACAGCTGAGTTAACAGACGGTAACCACGACAACAGTGGCTCCAGCAACAATAACCCTGTCAACGACTCTCCCACTGCTATACAGCCAACGGATCCAGTAACCATGGAGATCAGCTCATCGCCTCCGCTAACCCACATGGAGAGAGAAAACGTGGTCAGCTGGCGCAGCCAGGAAGTAGAGGAGCTCCATTACCCAGAGGGCCACGGGGTGCAGCAGCCAATCCGGGATGAGCAGGAGGAAGAAGGGGATGCAGAGAAGCAAAATGGGAAAAGAGATGAAGATGAGTTGGACTATCTTGTTTTTGAGATAGGAGAGAAGCAGGGAGAAGATGTAGGAGagagaggagaggagcagggagAAGACGGAGCAagaggagacacagagagaggagaggagcagggagAAGACGGAGGAAGAACAGAAATAGAAGGTAAGGAAGAAGGGTGtagagaaacagagagggaaGATGGAAGAAGAGTAGATacaaaagaagaggaagaatggATAGAAGAGACAGTGGGAGAGTTGGAAGACAATGCTGTGTCAGCGCTCCTGGTCGTCCAATCAGATCTCTCAGAGCAGGCCTGGGCTCAGCACCTTGGCGACACCGATGACCTCAGCGACTGTCTCCAAGCCGAGCTGGCTGTTGTGTACTCGGACAGTGATGCAGGGGAGGACCAATGGGCCAGCTCTCCGCCCTGTGATGTCACCAACCAGGAAGGAGCAGACAGAGGGATTCATGATAGCATCTgtgttggagagagagaggaagaggagaaaggggaagaagaggaggaggcagaAGTAGAGACTGGaagagaggagcagagagaggaggaagtagaggaggaggaggagaagtggGGAGGCAGggatgatgaggatgaagagcagagcTCCACAGCCAGCTCCACAGACCCTGACAGGAAGCTTCCTGTAGATTTCTGTGTCCCACAAGAGAGTTACAGTGAAAATGTCTCCACTGAGCATGTGGACTTTCTGTTGGCCCGCCAGCAGTGGCggaagatggaggaggaggtcaaaggtcagccaACCCCCAAACCAGGGCTCCGAGCTCAGGGAAGCTTCCAGGGCACCCACACTTCTCTGTACCCCCCCACTCGCAGCCCCCGACTCAAACACAGGGAGATCCATCCACCAGTGCCCAGGGAGCCGCCCCTGTCCTCCACCTTGTCCCCCAGTTCAGAGGACTCGGGCCTGGATGATTTGTCCTACCGCAGCCCGCTGGACGAGCCAGAGAGTGCGGTGGAGAGAGAGATCCGATTGACTCTGGAGAGAGAGGAACACCACCGCAGGGAGAGGGGGATGATTACACAGGGCCTAACTACACCCAGAGGCTCGACCCCGCAGACAGGACGATCTCCACCTAGACCTCCAGCCTGCCGCACTCCTACCTTGTCCATCTCCCCATCCCCTTCCTGCTCCTCTTCCCTTCCCCGATCTGTCTACCATGAAATGACAGCCAATAATGTCATCATCTTGGAGCCCGATTGCTCCATCTCCGCCTCCAGGAACCGCTTAGTCTCCTCTGCTATCGGGGGCCTCTCCGATTGGTCCACAATCAAGGATGCGGTGTCTTCCGCCAATGTCATCGTCGTGGAAACCTCCAATCTCATCATTCGCAGCGCTTCTGAATTCTGCCTAAGCTCCGCCCCTGTGTCCATGGAAACACAGGAAAGCACTTTCTCGTCCAATCCATTCTTCAAGCTGCGCTCCCTCAGCAGCCAGTCGCTGGTGGAGCAGGAGATCCGCATGGTgaggcagagggaggaggagtggaggaggcagagggaggaggagtggaggaggcagagggaggagatgtggaggagagggagagagaggtacGATACTGTGCTGGTGTCTCCAGGCCTCAGCGATAACATCACTTACAACGTGCCAGAGGTTTCAGACAGATGTGTCTCCTCCCCTTCGTCCCCCTCCAGGACCCGTAAAATGGAACGATCCAGTATGTCTTGTGACCACAAGtTCCCCTCTTCCCTCTCTTCTGTGCCAAGACGACAGAATGCCATGGCGCAGCGATGGGAGGCCTCCCtcttagccaatcagaagaAGGAGTAAGCAACGACCACGCTCAACTGACAGCCATTTCAAACGCAGTGCAGTGTCTATAGGATGCCTCATGAGAAGAGGACTATTTCTTCATTTATCTAGTTTGGGTTTCCATTATTCTTTAATGTCTGGAAAAGTCTGTTGCATGATGTCGGAAACAGTATGTCACAGTTTCTTATATATGATACCTCTGTATTCCCAGAATCCCTGTCCCAATAATAACTGAGTATAAAATTGCAATCATAATAATACTACTCTTTTTGACGTGTGACCCAGATTTTATGTAAATTTAGCAGTATTCTGcttcaatatttaatatttacagCACTTTGATTTGTGGGTGTTTATGAATTATGGGACTAGTTCAACTGTTGATATTTGTGGATTTTTATGACTGACTGAATATGATGCAGTGACTTTCAAACTTTTTCTGGGCAGTCATTTTAATTTCAGATATTAATTCAGTCTGTATTTTAAAGTAGATTAATAGCGTACAGCGTTTATTCAGAAATGTTCTAGCTATGCAGAGATTTGAGAAGGTACATGCAAAATGGTTTAGCATGTTGTGTTCTTTtcaatttgtattttatttttaaaggtgccAACCCAGACTTTGAAAATCACTGCCTTAGTGAAACGTTTTAATGAGCCATTGATCAAAAGAGTTTGGATGTTCCAGGTTTCAATGTCAGCCATGTTGGCTAAACAGTGCTAGCTGCTAACTGAATACCATTTGGGTCACAGTCGCACAGACCAGATGGTTTGCCTTTTCTTTGGAAGAGATTGGTTGTAACCCAGATAAATCCAGAATGGGCAGCAGTTTTGTGGGGTCATGAAAAACCTTTTTGAGGATATTGTAGTCTCAAAATTGCAAGTCATGCTAGTTTTATTTACCATTTTATTAGCATGGAATGTATGGCGTACGCACCAGGGCATGGACACCCTGAACCTGAATAAAACTGATCAGTAAAACCTTTA

Function


NR:

description
PREDICTED: uncharacterized protein LOC102313061

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039814653.1 True 3231 mRNA 0.50 8 29553459 29586063

Neighbor


gene id symbol gene type direction distance location
LOC120568712 NA coding downstream 260819 29287276 ~ 29292640 (-)
LOC120568834 NA coding downstream 449666 29101010 ~ 29103793 (-)
LOC120568118 LOC104947936,LOC107372586,LOC107373506 coding downstream 676857 28874875 ~ 28876602 (-)
LOC120567913 NA coding downstream 892310 28659832 ~ 28661149 (-)
LOC120567677 NA coding downstream 905926 28637052 ~ 28647533 (-)
LOC120567685 NA coding upstream 98987 29685050 ~ 29690335 (-)
LOC120567690 NA coding upstream 384027 29970090 ~ 29974289 (-)
LOC120568974 LOC101172692,LOC101069094,LOC103362177,LOC106599276 coding upstream 733889 30319952 ~ 30438652 (-)
LOC120568640 sdr16c5 coding upstream 896525 30482588 ~ 30524863 (-)
LOC120567647 LOC103362157 coding upstream 1131342 30717405 ~ 30726080 (-)
LOC120568801 NA non-coding downstream 42662 29508648 ~ 29510797 (-)
G118863 NA non-coding downstream 59552 29493304 ~ 29493907 (-)
G118851 NA non-coding downstream 146074 29407085 ~ 29407385 (-)
G118798 NA non-coding downstream 375701 29177482 ~ 29177758 (-)
G118795 NA non-coding downstream 376944 29175934 ~ 29176515 (-)
G118905 NA non-coding upstream 40596 29626659 ~ 29626861 (-)
G118906 NA non-coding upstream 41329 29627392 ~ 29627720 (-)
G118933 NA non-coding upstream 165778 29751841 ~ 29752060 (-)
LOC120567751 NA non-coding upstream 196044 29782107 ~ 29796905 (-)
G118940 NA non-coding upstream 252148 29838211 ~ 29838620 (-)
G118856 NA other downstream 132807 29420379 ~ 29420652 (-)
G118764 NA other downstream 567140 28986091 ~ 28986319 (-)
metap1d metap1d,LOC102783095 other downstream 1400689 28146271 ~ 28152770 (-)
G118524 NA other downstream 1834700 27713467 ~ 27718759 (-)
LOC120568986 epha4,LOC100711706 other downstream 1878099 27643327 ~ 27675360 (-)
LOC120567741 NA other upstream 50040 29636103 ~ 29649792 (-)
LOC120568429 LOC106574020,LOC106613541,LOC103366013 other upstream 854826 30440889 ~ 30477185 (-)
LOC120568929 NA other upstream 1278183 30864246 ~ 30876111 (-)
G119177 NA other upstream 1540367 31126430 ~ 31174951 (-)
G119169 NA other upstream 1583859 31169922 ~ 31171610 (-)

Expression



Co-expression Network