LOC120567691 (LOC107740693)


Basic Information

Item Value
gene id LOC120567691
gene name LOC107740693
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 31007722 ~ 31011324 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814660.1
TGAGTggagttttttgtttgtctgtcttgtcttttgtttgtccctgtgtgtgttttatattgtgTATCATGTCTGATCCTGAGTTGGACTGTCTCCTGAAGGAGATGAGTGACGTTGTCGATGAGGCTGAACATCAGGCTCACCTCCAAAACCTCCAACAGCTCATTAGCCAGTCAGCAGAACCATCCACCAGTCATCCATCAAACAGCAAGCAAGACGTTAGGTGGAATAAGAGGGACAgtgatggaaacattatttaCGGCAGGCCCAGATCATCCCGCAAACAAGcagGTCCCAGTCACAGCCAGAGTCGGAAGACTGGTGTCTCTAATGTCAGGGCTCCGGACACCAGTGGGGAAGTGACCAGTGACTTTCCTTCTGTTACTGCGGAGTCCTTCCTTCAAGAGCTTAAACGCTCACTGGGTGAGGACATACATGAGGATGAAACGCCACCTCAAGCCTCAACAGACTGGTCGACCCGAAAGAGCCTCATATCAGGGTggtgggagaaagagagacccCGTCTGGTCAACACCATGGTGGCTGGACAACATGCGGCAACTCGGATCTGCCAACACTGTGGAAACGGTCCAGCCGTTATCCGTTGTTGTGACTGCCGACCACACCCATTCCTCTGTGGCCAGTGTGATGTCAGGGTCCACCGAGGTCAAGTGTTCCACAACAGGGATTCAATGACACATGGATTTTTTCATCCATTGCCTCCCACAACTTGTGTTGTGGAGAGGTCGATGAAGCCGTCAAaGCGTCTTGTACCTTTGGAGATGCCAGAGACAATATGTGGTTGTCTACGAGGATCGTCCACTGTCAACGCAGGACAGTCCATAGTTGTGGTTACAATGAATGGGCGATATGATCTCAGATTGCCTCAGACCAGATGCAAGGCATGTGAAGCCACTTGGAGTCCTGGAGTGGATGACCTGATCCGCAATGACTACTGGCCTGCCACTTCTCACCATTCAACAGTGTACGCAACAGAtgtccttttttcttttgaagaGCTGAAGATGGCAGCACCAGGGCTGTCTAGCCAAGCATTTCTTAGAATGCTGGATCAACGTACTGTTCGCTTTGGCCGTAGCGGAAACATCACAGCAGACAGCTTCCGTAAAAGCTTCTTCGAGTGGGAGGCTGTCCGATTTGAAGTGGACAAATTATGCCTGGTGGACCACTTTGACTGCCCAGCATGCAGCCCAGACATGCTTGCAGTATCTGTTGATGGAAACCGCAAGCACTACAGATTCAAGAGTGCAGCAAGATCGGAGGAACAAGCCATCTTTGATGGCGTGTTCATCGCGAATGATGACGACGTTGGAAGATTTGTTGACTACGTCCATACCTCAACCAGTCATGTCTCTGGAAGAGGTGTCTGTGGAGGGCAGTGGTCAGCTGCGCGTGAAACATCTCAGAAGTCGTCAGGAAAAACAGATGAGGAGGGCCTGGAACTTGCGTGTGCCGTCATGGGGTTCTCCGTTACGTTCCCCTCAATATGTTCAGGGGAGATTTTTGCCTACCCCTGTACCTCCAAAAGCAAATGGCCTGTAAGCCAGTGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107740693

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814660.1 True 1571 mRNA 0.50 9 31007722 31011324

Neighbor

gene id symbol gene type direction distance location
LOC120568730 LOC101472437,LOC102310659,LOC102778004,LOC103360659,LOC106534850 coding upstream 789000 30101634 ~ 30218722 (+)
LOC120569133 NA coding upstream 950613 30055815 ~ 30057109 (+)
LOC120569089 NA coding upstream 961532 30044894 ~ 30046190 (+)
LOC120568908 NA coding upstream 974188 30031910 ~ 30033534 (+)
LOC120567688 NA coding upstream 1264130 29735520 ~ 29743592 (+)
LOC120568980 NA coding downstream 420482 31431806 ~ 31453460 (+)
eif3f eif3f coding downstream 849406 31860730 ~ 31865235 (+)
LOC120568893 LOC100705068 coding downstream 917821 31929145 ~ 31939478 (+)
lig1 lig1,LOC102777267 coding downstream 930879 31942203 ~ 32016352 (+)
mpz mpz,LOC102776110 coding downstream 1020328 32031652 ~ 32051435 (+)
LOC120568932 NA non-coding upstream 81439 30924766 ~ 30926283 (+)
G119076 NA non-coding upstream 111783 30850964 ~ 30895939 (+)
G119071 NA non-coding upstream 212219 30795242 ~ 30795503 (+)
G119066 NA non-coding upstream 314438 30692988 ~ 30693284 (+)
G119064 NA non-coding upstream 325401 30682081 ~ 30682321 (+)
LOC120568931 NA non-coding downstream 72944 31084268 ~ 31085538 (+)
G119122 NA non-coding downstream 182807 31194131 ~ 31197339 (+)
LOC120568930 NA non-coding downstream 240462 31251786 ~ 31253673 (+)
G119219 NA non-coding downstream 342906 31354230 ~ 31354583 (+)
G119220 NA non-coding downstream 343373 31354697 ~ 31354972 (+)
LOC120568595 sdr16c5 other upstream 330370 30569095 ~ 30677352 (+)
LOC120567689 NA other upstream 1037809 29963415 ~ 29969913 (+)
LOC120568082 LOC101159534,LOC103372818,LOC101069325 other upstream 2837752 28156801 ~ 28169970 (+)
LOC120568664 NA other upstream 3302511 27704001 ~ 27705211 (+)
LOC120568838 LOC103364371,LOC102207447,LOC101475014 other upstream 3398004 27602000 ~ 27609718 (+)
G119114 NA other downstream 153902 31165226 ~ 31203586 (+)
G119123 NA other downstream 187636 31198960 ~ 31235565 (+)
G119257 NA other downstream 448540 31459864 ~ 31460908 (+)
dnaaf6 pih1d3,LOC106903480,LOC103138000,LOC103138005,LOC103137996,LOC106960166 other downstream 854431 31865755 ~ 31869495 (+)
pip4p1a tmem55b,LOC101161334 other downstream 877584 31888908 ~ 31914704 (+)

Expression


Co-expression Network