LOC120567713 (LOC107092464,LOC101065262)


Basic Information

Item Value
gene id LOC120567713
gene name LOC107092464,LOC101065262
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 36565761 ~ 36583870 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814682.1
ATGCTGTTCATTGACTTCAGTTCAGCATTCAACACTGTGATCCCCTCCAAGCCTATCTCCAAGCTCAGCCACCTTGGCATCAGCAACTCACTCTGCAACTGGATTATCGACTTCCTTACTAACAGACCCCAGGCTGTTAAATTAAgaagtctctcctcctccactaTCACCCTGAACAATGGCGTGCCGCAGGGCTGTGTGTTGAGCCCTCTGCTCTACTCCCTCTTCACCCACGACTGCGCCCCTGTTTATAGCTCCAATGCCATAATTATGTTCGCAGATGACACCACAGTGGGGGGCCTGAtcaaagaggaggatgaaacAGCATATAGGGATGAGGTTCAGCACCTAGCTATGTGGTGTAAAAACAATAACCTGGCACTCAATACCCAGAAGACCAAGGAGATCATTGTTGACTTCAGGAGAACCAAGATCAATGCACACACCCCCCTCCACATTAGCGGTGCTGAAGTGGAACGTGTGTCTAGCTTTAAGTTCCTTGGGGTCCACATGACAGAAAATCTTTCTTGGTCTCTCAACTCCTCCAGTCTGGTGACTTTCTACGGAGCCTTAAGAAAGCACAACTATGCCCTAGAATTCTATCAGACATCTACAGCTTCCTTGGATGTCAGGATGGACggacaaagaagaaaaagagaaaatcagAGAAGTGCTGCAGCCAGAGGAAAGTGGGCCAGTAAAACAGAATATATTCTGGTTGTTGCAGGAAATGTGGTCGGCCTGGGCAACGTGTGGAGATTTCCTTACCTCTGCTACAAGAACGGTGGAGGGGCCTTTCTGGTGCCATATGGTCTGTTAGCTGTGGTGTGTGGGATACCTCTGTTCCTGTTGGAGACTTCAGTTGGTCAGTTCACCCAGGAAGGATTCATCACTTCTTGGAGGAAGTTGTGTCCACTGGCTCAAGGAATTGGATTTGGACAACTGACGATTTCACTCTGTTGCTTCATCTACGTTTTAATTGAAGCTTGGGCTCTCTTCTACCTGGTGTTCTCATTTAGATCCCAGCTGCCCTGGGCCAGCTGTGACAACACCTGGAACACGGCTAACTGTCTTGGTCTACAGACTTTTACTTCATCTAATGTGACTGCAAATCAGACCAACACCACCTCTGCTGCAACTGAGTTCTGGGAACGCCGTGTGCTGGGCGTGTCTGGAGGCATTGAGGAGCTGGGCAGTGTGAGATGGGAGCTGGCTTTGTGTCTTATGGCCTGCTGGGTGATCTGCTACTTCAGCATCTGGAAAGGTGTCAGATCTTCTGGAAAGGTAGTGTATTTTACAGCCACGTTCCCCTATGTGATGCTCCTGATACTGTTGATCAGGGGCTTGACTCTACCTGGAGCTTGGGAAGGGATCTACTACTACCTGTATCCAGACCTGAACCGCCTGGCTAACCTGGAGGTCTGGATAGAAGCAGGATCTCAAATATTTTTCTCCTACAGCCTGACTGCAGGGGGTCTGCATGTCCTGGGCAGCTATAATGAGTACAACAACAACTGTTACATGGACTGCTTTTGGCTCTGTCTGCTGAACAGTGGGACCAGTTTTGTGGCTGGATTTGTCGTCTTCTCTGTACTTGGATTCATGGCTCAGAAACAGGGTGTTACTGTCGACACTGTGGTCGAGTCAGGTCCAAGTTTGGCCTTCATTGCTTACCCTCAGGCAACAGCTCTGATGCCTTTTCCACAGTTCTGGACTGTCTGCTTCTTCCTGATGCTCATTCTGCTGACTGTTGACACACATTTTGTGATAGTGGAGAGTTTTATCACCACGGTGACCGATTTGTTTCCAAAGTGGTTTCGTGCACCATTGAGGCACGAGATCTTTGTCCTTGCCATCTGTGTCTCCAGCTTCCTCATACATCTTACCTTGGTTACGGAGGGAGGAATTTACATATTCCAACTCATTGACTTCTACGGCTCTACCAGAGTGAGTCAGAATTTTGTGGCTATTTGTGAATGCCTGGCTGTGGGCTGGATATTTGGTGCTGACCGCTTTTCCAACATCATAGAGGATATGACAGGACAGAGACCATCAGTTTTCTTTAAACTCTGCTGGAAATACTTCATTCCTCTGCTGTCACTGATCACCTTAATCCTGTACCTGATTGATTACAAAGCCCTCAAGTTTAACGACTGGTATGTTTACCCTGACTGGGCGTACGCTCTAGGATGGACCATGACCCTCTCCTCTGTTCTCATGGTGCCACTGTGGGCAGCTGGACAGATGTGTTTGACAGCAGGAACCTTCAGACAGCGTTTGTCTGTCCTCTGTCGTCCTGCTGAAGATCCAGCCTGGCAGAGGAGAGCCATGGGAGAGGAGGGAACAACTGTTGAACTGAGGACGTCTGCAGTGACCACTTAGTGTGAGCTGCAAAGTCACATTAACAAGACGGTTTCATCTGTCATTaggtcatttattaaataagtTGCACGCTGGTTTGGGTCATTTTATTGAATAGAATAGTATAATTCTAACTTCTTAGCAGTAGCATCCCTAAACTGTCAGTTATCATTAAGTCAAGTATTACTGTGTACTATTCTTGTATCCCTTTCCTCCTCATATTTAATGTTGCTTCAGTCATCATCACTTATTTGCTCTCTCACCATTTGATTTAAATCAGTCTTAAA

Function

NR:

description
PREDICTED: sodium- and chloride-dependent betaine transporter-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814682.1 True 2648 mRNA 0.47 15 36565761 36583870

Neighbor

gene id symbol gene type direction distance location
pold3 pold3,LOC107703443 coding upstream 102099 36449037 ~ 36463662 (+)
LOC120567707 LOC106910133,LOC107834262,LOC106939220,LOC107373952,LOC104944801 coding upstream 1121948 35431679 ~ 35443813 (+)
LOC120567912 NA coding upstream 1302859 35261558 ~ 35262902 (+)
LOC120569116 LOC107667722 coding upstream 1397045 35165658 ~ 35168716 (+)
LOC120568812 LOC102310619,LOC100692846,LOC108280567,LOC105903927,LOC106524909,LOC108427173 coding upstream 1740940 34809892 ~ 34824821 (+)
LOC120568503 LOC100700741,LOC103361717,LOC101470268 coding downstream 4784 36588654 ~ 36620596 (+)
LOC120568504 LOC103361716 coding downstream 40207 36624077 ~ 36710812 (+)
LOC120568506 NA coding downstream 153278 36737148 ~ 36747668 (+)
LOC120568209 NA coding downstream 260141 36844011 ~ 36844650 (+)
LOC120568211 NA coding downstream 271326 36855196 ~ 36855843 (+)
G120720 NA non-coding upstream 7029 36411744 ~ 36558732 (+)
G120714 NA non-coding upstream 160996 36404553 ~ 36404765 (+)
trnal-caa_4 NA non-coding upstream 316234 36249445 ~ 36249527 (+)
trnal-uaa_9 NA non-coding upstream 323157 36242522 ~ 36242604 (+)
trnal-caa_3 NA non-coding upstream 323492 36242187 ~ 36242269 (+)
G120796 NA non-coding downstream 235693 36819563 ~ 36819774 (+)
LOC120568212 NA non-coding downstream 279923 36863793 ~ 36866140 (+)
LOC120568213 NA non-coding downstream 287481 36871351 ~ 36875394 (+)
G120842 NA non-coding downstream 505580 37089450 ~ 37090881 (+)
G120860 NA non-coding downstream 552489 37136359 ~ 37136750 (+)
G120717 NA other upstream 159072 36406121 ~ 36406689 (+)
G120716 NA other upstream 159988 36405240 ~ 36405773 (+)
LOC120568940 NA other upstream 923728 35594878 ~ 35642033 (+)
pde4ca pde4c,LOC101063915,LOC100693394,LOC102791393,LOC102313416 other upstream 1874141 34624276 ~ 34691620 (+)
pik3r2 pik3r2,LOC102792547,LOC100693657 other upstream 1958005 34569394 ~ 34607756 (+)
LOC120568208 LOC103361715,LOC100701557,LOC100700197,LOC101469035,LOC102215562,LOC102289753 other downstream 296048 36879918 ~ 37087443 (+)
G120914 LOC103396775 other downstream 719024 37302894 ~ 37306014 (+)
LOC120568367 LOC103371210,LOC101487706,LOC100534480,LOC102208811,LOC102309261,LOC104937382,LOC106522909 other downstream 1405695 37989565 ~ 38019068 (+)
G121058 NA other downstream 2171814 38755684 ~ 38755931 (+)
G121171 NA other downstream 2808102 39391972 ~ 39392776 (+)

Expression


Co-expression Network