acadm (acadm)


Basic Information

Item Value
gene id acadm
gene name acadm
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 15725767 ~ 15733515 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814707.1
GACACGTAATCAATCCtgctgctgtgattggctgagaagGCGGATATTAATATGTAGGACAAAGGTTGCGGTGGGCCAGTTTGTTTATGCGACTTGTGCAGTACTAACACAACAATGCTGCTCAACAAGGTTCTCAAAGCCAGTGTACGGTCTGGGATCCGGCTGCAGAGCtccagtgctgctgctgctgcatccaGTGTTGCAGGATCCCACAGCACAGCTTCCCTTGGCTACTCATTTGAGCTGACGGATCAGCAAAAGGAGTTCCAACAGCTGGCGAGGAAGTATGCACGTGAAGAGATCATCCCTGCAGCAGCTGCTTATGACCGGAGTGGTGAATATCCTGTCCCCATCATCAAGAAGGCATGGGAGCTTGGTCTAATGAACAGCCACATTCCACAAGAATATGGTGGAATGGGCTTGTCCATCTTTGACAGCTGTCTTATCACAGAAGAGTTGGCTTATGGCTGCACAGGAGTCCAGACTGCTATCGAGGCAAACTCTCTGGGaCAAATGCCTGTTATTATAGCCGGCAGTGACACACAGAAGAGGAAATACCTGGGAAGGATGACTGAGGAGCCTCTTATGTGTGCGTACTGTGTGACCGAGCCCGGCGCGGGCTCTGATGTGGCCGGCCTCAAGACCCGGGCTGTGAGGATGGGTGATGAGTATGTTGTTAATGGGCAGAAGATGTGGATCACCAATGGTGGGAAAGCTAACTGGTACTTCCTCCTGGCCCGCACTAACGCAGATCCTAAATGTCCAGCCAGCAAGGCTTTTACTGGCTTCATTGTGGATGCTGACACTCCAGGAATTCAAATAGGAAGGAAGGAGATGAACATGGGCCAGAGGTGCTCTGATACCAGAGGCATCACCTTTGAGGATGTGAGAATCCCAAAGGAGAACGTCCTGATCGCAGAGGGATCTGGCTTCAAAATTGCCATGGGTGCCTTTGACAACACTCGTCCACCAGTGGCAGCAGGAGCAACAGGCCTGGCACAGAGAGCTCTTGATGAAGCTACCAATTATGCACTTGAGAGGAAGACCTTTGGCAAAGTTATTGCCGAGCACCAGGCAGTGTCCTTCCTCCTAGCTGAGATGGCGATGAAAGTGGAGCTGGCCAGGATGGCATACCAGCGGTCTGCCTGGGAAGTGGACCAGGGCCGCAAAAACACCTACTACGCCTCCATCGCCAAGGCCTTCGCTGGAGACATCGCCAATCAGGTGGCCACTGATGCTGTTCAGATATTTGGAGGTAACGGCTTCAACAGCGAATACCCGGTGGAGAAGCTGATGAGAGATGCCAAGATCTACCAGATCTACGAGGGCACTGCTCAAATCCAAAGACTCATTATTGCCCGAGAACACCTGGGAAGATATAAGAAATGAACTCTGCACGCCTGACTTGTCCTCCTTCAAATGTACTTTTGTTGTAACTTTTCTACACATATACATGTGTTCCTGGGAATATATCTGCTTGCTTGTATTCAGGATACATTTGCAGAATGTTGTTTGCCTTAACAGCACTTCATCCTccctttttagattttttttttttttaactgatccAGACCCTGAATTGGTAGACATAGTCTACCTTTCTCATCAGAGAACATCAGAACCTGTGAGCAAAACCGGTCCCATTTTTAAAAGGGTTTTTCCGAATGCAGCTCAGAACTGTGGCCTTATTTTGTGACTTGAAGCGTTGAGGATCACAACATTTAGGCAAAAGATCCTATGACCATGTCCTGTCGGGCTGCAGCCTCTGTAGGTTGTAAATAACTGCAGCCAGGCACAAACAGTGCTGCTTTTAAATGCAGTCTGGGCTTTAAACTGTAAAGTTGTTTATCTGGTAAAACAGTGTCTGTCTCAGGGCAACTTGATGAACTTGGACATATTCTACTTTATAAGTTGACAAGCGCAGTCCAaacatgcattgtttttttgtttattctcATAGGCAATAAAAGCATGCAAAATCAAAGGttctttttctcaaaatgtccaACTGATGCCTTGTTTTACCTTTTTGACATGCTGGCTTTCCCTATTGATCTTCTGCACCAATTCTTCAGATCTTTCGCACAGCAGAACCAATTTTAATCTTGATCTGTAGAAATCCATTTCTCACCAAAATGTGTTAGAAACTGAGAAATTTGTGTCTGATTTAACAACTTTAAAAATGCATGTCTGAAAATGGTTTTATGTCTGATTTAGATATTATGTCCTTAAAGTTTTTCGTTACTCTCCAATGGAGAGAACCTCTGCAGAAAGTATGGATGTAATATGTTCTGTGGTTCAGTTGTTACTGTTAACACATCACTTTTTGACAATGACATAAATGTGAATTCATCAGAA

Function

symbol description
acadm Predicted to enable medium-chain-acyl-CoA dehydrogenase activity. Predicted to be involved in fatty acid beta-oxidation and medium-chain fatty acid catabolic process. Predicted to be located in mitochondrial matrix. Predicted to be active in mitochondrion. Is expressed in female organism and liver. Human ortholog(s) of this gene implicated in medium chain acyl-CoA dehydrogenase deficiency. Orthologous to human ACADM (acyl-CoA dehydrogenase medium chain).

NR:

description
medium-chain specific acyl-CoA dehydrogenase, mitochondrial

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0003995 acyl-CoA dehydrogenase activity molecular_function

KEGG:

id description
K00249 ACADM, acd; acyl-CoA dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814707.1 True 2358 mRNA 0.46 12 15725767 15733515

Neighbor

gene id symbol gene type direction distance location
LOC120567732 rps8,LOC104932872 coding upstream 1379 15720938 ~ 15724388 (+)
LOC120569145 NA coding upstream 1970 15723729 ~ 15723797 (+)
LOC120569144 NA coding upstream 2564 15723135 ~ 15723203 (+)
LOC120569146 NA coding upstream 3194 15722507 ~ 15722573 (+)
LOC120569147 NA coding upstream 3519 15722139 ~ 15722248 (+)
rabggtb rabggtb coding downstream 3677 15737192 ~ 15745228 (+)
ak5 ak5,LOC102787869 coding downstream 222844 15956359 ~ 16031840 (+)
miga1 miga1 coding downstream 344972 16078487 ~ 16093938 (+)
dnajb4 dnajb4,LOC102785119 coding downstream 379725 16113240 ~ 16118518 (+)
gipc2 gipc2 coding downstream 386053 16119568 ~ 16136858 (+)
G114998 NA non-coding upstream 48424 15677093 ~ 15677343 (+)
G114991 NA non-coding upstream 100444 15625102 ~ 15625323 (+)
G114944 NA non-coding upstream 175847 15549129 ~ 15549920 (+)
G114909 ripk2 non-coding upstream 270392 15444478 ~ 15455375 (+)
G114905 NA non-coding upstream 288014 15436104 ~ 15437753 (+)
LOC120568726 NA non-coding downstream 12662 15746177 ~ 15759108 (+)
G115055 NA non-coding downstream 109639 15843154 ~ 15848292 (+)
G115095 NA non-coding downstream 360495 16094010 ~ 16097398 (+)
LOC120568625 NA non-coding downstream 370203 16103718 ~ 16107792 (+)
G115103 NA non-coding downstream 402650 16136165 ~ 16138828 (+)
slc35a3b LOC103357859,LOC104957008,LOC101481522,LOC102792347 other upstream 157273 15554471 ~ 15568494 (+)
zgc:153115 klf13,LOC104948390,LOC103358333,LOC101073550,LOC105030379,LOC106568757,LOC107752329 other upstream 196998 15520782 ~ 15528769 (+)
asip2b agrp2,LOC105941385,LOC102299529,LOC102795060,LOC103358555 other upstream 247305 15472702 ~ 15478462 (+)
LOC120568540 LOC108238308,LOC100706341,LOC103359463,LOC106530177,LOC102798013,LOC101474556,LOC102303803 other upstream 356987 15338557 ~ 15368780 (+)
G114789 NA other upstream 568568 15151796 ~ 15157199 (+)
st6galnac3 st6galnac3 other downstream 31168 15764683 ~ 15843094 (+)
st6galnac5a st6galnac5,LOC103370426,LOC102788813 other downstream 132071 15865586 ~ 15921531 (+)
LOC120568164 LOC104950913,LOC104937610,LOC103355754 other downstream 492792 16226307 ~ 16228551 (+)
LOC120568419 LOC102779359 other downstream 705510 16439025 ~ 16527682 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other downstream 876861 16610376 ~ 16612206 (+)

Expression


Co-expression Network