LOC120567742 (LOC104929666,LOC103364388,LOC102238372,LOC107384139,LOC106526336)


Basic Information

Item Value
gene id LOC120567742
gene name LOC104929666,LOC103364388,LOC102238372,LOC107384139,LOC106526336
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 27286920 ~ 27291535 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814722.1
GCCCCAGCGAGTATAAAAGCCTCCGCGTGCTGTCAGCATCAGAAGATGCGTCTGCATCGCGACAGACCTCAGCAGAACTCTCCTAAGTAGGCTGACACGGACAAATCACGGTTTCCCCTCCGAGCAAGTTTAGAAATGACTCGGATAACTCATGCCACTCTGAGGCTTTGAACCAAACTAAGTACAGAACGAAGGAGATGGGGGGGATTGTATGCGTCCGCGCCTGCGCACCCACACTCTGGAAGTTAGCCGCAGAGACGACGGGAAAGCTGCCGTTAACTTGTTTTTAGGACAAAAGAAGCCTTTTTTCCTCCGCAGAAGCATGCAGAGCAACAGCAGCGCCTCCGGGCCCCTGGGCGCTCTGAACGTGTGCGGAGGAGAAGAGGACGACATCTCGAGAGTTGTCAGCCTCACGGGAGCAGCCTCTAATCTCGCAGCTCTGAACCTTTCACTCAACTGCTGGCTCCtcatcctctccaaggagtcCTCGCTGGACCTGCACGCAGACGGCGCAAACCTGGCAGTACGAGTTGTCATTGCCCTGGTCTACCTGGTGGTGTGTGTTCTGGGGCTTGTGGGTAACCTGCTGGCCCTCTTCCTGCTGCACTCGCGCCGCCGGGGCCATCGCCACTCCTCCATCGACTGCTTCGTGATGAGCCTGGCGCTGACAGACCTCCAGTTTGTCCTCACCTTGCCCTTCTGGGCCGTGGACACGGTGCTGGACTTCCGCTGGCCCTTTGGCCAGGTCATGTGCAAGATCGTCAGCTCGGTCACCACCCTGAACATGTACGCCAGCGTCTTCTTCCTCACCGCCATGAGCGTGACCCGCTACCACTCCATGGTTACCTCTCTGAAGATGGGCAGCCCTGGCCTCGCCACTGCTCATGCCAAATGGGCCAGTTTAACCATTTGGGCGGTGTCACTGGTGGCTACGCTGCCTCATGCTTTCTACTCCACCACAGTCCAGGTGTCTACAGATGACGAGCTGTGCTTAGTGCGCTTCTCTGACTCCGATTCAAGCCGCTGGGATCCTCAGTTCCTGCTCGGACTCTATCAAACACAGAAAGTCCTCCTGGGATTCGTAGTTCCCTTGATTGTCATCTCCGTGTGCTACCTCCTCCTCCTGAGGTTCATCCTGAGCCGGCGCAGCGTAGGCAGCATGGTCAGCGCGAGCGTCACGGAGAGGTCCGAGTCGGAGAGAGGACGCCTCCGCCGCCGCTCCAAAGTCACCCGCTCCGTCACCATCGTAGTCCTGTCCTTCTTCATCTGCTGGCTACCCAACCAGGCTCTTACCCTGTGGGGGGTGCTGATCAAATTTGACTTGGTGCCCTTTAGTAAAGCCTTCTACAACGCCCAGGCCTACGCCTTCCCCCTGACTGTGTGCTTAGCTCACGCAAATAGCTGTCTTAACCCGGTGCTCTACTGCCTGATCCGAAAAGAGTACAGAGCTGGACTGAAGGAGCTCCTGCTCAGAGTGTCTCAATCCGTCCAAAATGTTCTCACTCAGGgtctgagagagagaagagtggcAGACGCACCGCCCAGCCTGGTTATGATTCACAAAGACGGCAATAAGTGATGTGCTCTGTAAAAGGAAAAgttggacattttggaaaacaattaTTTGCTTTCTGGCTGAGAGTTGGATGAGAATATCCATACCACTCTCCTTACAAACAGTGGTATCCATCTTCTCAACTCAACTCTTGATCGCGATTTCAATTTcggctcctaacgatcacaaaaacatcggaatcgggaaacgattattttgcacattacattttgcaagtaaactctcaTTTTGGCTTGTGTTCTGAGGGGGAATTTAACAAGTTCaacaggaaaagtattaagggtgttttcactgttgatttgtttaactgttccataaatgcaacatctttccaaacgTCAATGAATAAATCGTGTTAAATAGTCGTGATGTTAATATTGactaaaataattgtgattatgattttttttccataatcgagcagcccgaCATTCCTCAAAGTGTCAAACTTTTCCTTTGATACTAAATGAAATGCTCCTTTATGAGTCAACTTTGTATGCCATATTTTCTTtggtgccatttttttttaatcacgtTCCTGTGTGACACTGTAATCCCCTCCAGACTTATGAACAGCTATGATTTAGCACAGACAGATATATCACAGACTTTTTGTGAAACATGCCACTTTGGAAGTAATCTCCGTGGCGACAAGTATTCTTGAAAATGATCTTAGTTACACTGTGGGCTGATTTCTTATTTCGCACAATCAAGCAAAACACAGTGTGATGCTTGATTAGTTCAACCTGTGAAGTGATTTTTCTTGTACTTTGCACCTCAATACACTTACACAGGCAATCACGAGGACTGTAAGATTGTTACATTTTCCTTATTATTGATGtgtttaatatttatttgtgttattGTTGGTAAACTCAATGAGGACACTGCAGTAGAATCTAGCATTAGCTGTCGTCCATTCtcatgtctctctgtgtctgcctTGCTGTACTGCTGTGAATCGTTTTGTGATCAAGGTATATGTAATGTGACATTAAATAAAACGAGAGAACAAAA

Function

NR:

description
PREDICTED: relaxin-3 receptor 1

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004982 N-formyl peptide receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814722.1 True 2593 mRNA 0.49 3 27286920 27291535

Neighbor

gene id symbol gene type direction distance location
LOC120567815 LOC104964637 coding upstream 5590 27261660 ~ 27281330 (+)
LOC120567763 btbd2,LOC103376164,LOC107096948 coding upstream 35649 27246293 ~ 27251271 (+)
LOC120568858 mex3d,LOC106923040,LOC106951442,LOC103151246,LOC103479451,LOC105934582,LOC107096960,LOC101078722,LOC104929649 coding upstream 90714 27191141 ~ 27196206 (+)
mbd3a mbd3,LOC104929650,LOC108239474 coding upstream 96690 27183776 ~ 27190230 (+)
map2k2b LOC102194177,LOC104965132,LOC101484555,LOC102792644,LOC100697571 coding upstream 144005 27135001 ~ 27142915 (+)
cactin cactin coding downstream 26794 27318329 ~ 27328851 (+)
abhd17aa LOC104964210,LOC102219722,LOC102776363,LOC106951423,LOC103364376,LOC103151229,LOC103479270 coding downstream 142578 27434113 ~ 27442129 (+)
LOC120568637 LOC103375584,LOC102291402,LOC100711435,LOC101486656,LOC102207732 coding downstream 320540 27612075 ~ 27632981 (+)
LOC120567796 NA coding downstream 394629 27686164 ~ 27688056 (+)
epha4b LOC103372263 coding downstream 447457 27738992 ~ 27838118 (+)
G118306 eef2,LOC108239462,LOC107552698,LOC107384141 non-coding upstream 25565 27258374 ~ 27261355 (+)
G118280 LOC108239462,LOC106526414,LOC106536761,LOC107384141,LOC107096963,LOC104964635,LOC106908645,LOC106951439,LOC103151243,LOC102221193,LOC103479455 non-coding upstream 31571 27252543 ~ 27255349 (+)
G118303 NA non-coding upstream 41965 27244749 ~ 27244955 (+)
G118283 NA non-coding upstream 88461 27198183 ~ 27198459 (+)
LOC120568996 NA non-coding upstream 265811 27019846 ~ 27021109 (+)
G118409 LOC103364379,LOC104929640,LOC100699176 non-coding downstream 72043 27363578 ~ 27366561 (+)
G118420 NA non-coding downstream 95361 27386896 ~ 27387956 (+)
G118488 NA non-coding downstream 318563 27610098 ~ 27610325 (+)
G118514 NA non-coding downstream 397477 27689012 ~ 27690687 (+)
G118537 NA non-coding downstream 652716 27944251 ~ 28042190 (+)
LOC120569025 NA other upstream 104200 27179097 ~ 27182720 (+)
tcf3a tcf3,LOC103366684,LOC104929652 other upstream 109714 27147061 ~ 27177206 (+)
LOC120568791 LOC103357601 other upstream 348038 26878555 ~ 26938882 (+)
G118234 sugp1 other upstream 400890 26883559 ~ 26886030 (+)
LOC120567599 LOC101062208 other upstream 429526 26839178 ~ 26857394 (+)
gpr35b NA other downstream 102988 27394523 ~ 27399396 (+)
LOC120568838 LOC103364371,LOC102207447,LOC101475014 other downstream 310465 27602000 ~ 27609718 (+)
LOC120568664 NA other downstream 412466 27704001 ~ 27705211 (+)
LOC120568082 LOC101159534,LOC103372818,LOC101069325 other downstream 865266 28156801 ~ 28169970 (+)
LOC120567689 NA other downstream 2671880 29963415 ~ 29969913 (+)

Expression


Co-expression Network