LOC120567744


Basic Information

Item Value
gene id LOC120567744
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 19789625 ~ 19791903 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814724.1
ttttgtgtaatgtatatagcctaaaaacaattttaaatgaaaacacagactattttaggaaaagtcaggtatgCAGGATAGATCTGCCTGTATTAGCATGCTGACTTTAGCACTTAGTTGAAAAGTCTGCTGTGATGGCGAAGTGGATATGACATATGCTGTTGGTGTGGAagacctgggttcaaatcccactgtgatacatcaaccaatgtgtccctgtgCTAGACatttaacccctagttgctccagaggcgtgcgacctctgacatatatatgtaagtcgctttggataaaagtgtcagctaaatgacatgtaatgtaatgtatggCTGTGTGGATTATATACTCAATACCCTGCATAATTGTCAAGCTACAATTAGTTCTTAATAGCTGACATAAACTCAGCAGCAGCTTTATTAGGTATACCTGTTCAAATGCAAATAAAGAATGAATCTGTCGATCCTGTGGTAGTCTCGCATcgccagacctacctccacagcgctggaaTTTTGGAATTTTATTTCGACGTTATATTATCATCACTATTAATGTGTTCttgatttataataaaatgaagttaaaatATTAAGTTCTGGAGTGTCTATGTTTTGAATAACCTTCACTGCCATATCTAAGTCACCCATTCCCCCATTTCATGTAAATGTAATGCTCAAACTGAAAATGGGTTAAGCTACTATTGCACCATCTTCGACTAATGTGAAAGAGGAAACATGAGTTTGCACCAACTTCGTTCACAGTGCAATTTACAACAAGACGTGACAGCCGTCGTTCAAGAAAACCTACAATGGCAAACAACTCCACAGGGAGCGGCGGAGGTGTAAACAACAGCAGTGATGTGGGGTATCTTAATGATGAGACGTTTACCATTAACACCATCACTGGTGCCTTCTTCATTTTGATCTTCATCTTCAGTGTCATGGGAAACAGTCTCCTGTTATGTGTTCTCGTCGTCTACGAGAACCTGAAAAATGTCACAAATCTATTTATCTTGAACCTGGCCTGCTCTGATTTGATCTTCACTGTTACACTTCCATTCTGGGCCGTCTACCACCTGCATCACTGGATCTTTGGTGACTTTGCCTGCAAATTTATGACTCTGTTATACTTTCTAGGTTTTTACAGTAGCATCATTCTACTGACTGCCATGACTGTGGATCGTTTCATAATAGTGGTGCTGCACAACTGGCCAAGCAAGCCTGTAAGGAGGCAGAGGTGTGCAATGGTTGCCTGTGCAGCTGCCTGGGCCATCAGCATTGCTGCATCCGTGAGTGATGCTATCAAAGTAAAGGCGGAAAACCGCTTGCAAGGTTCAACATGTGAGGATCACTCTGATGTCTTTGATGTAAAGCTGGGATATTATCTCCAAGTGTCACTGCTCTTTTTCCTCCCATTTGCAATTGTTGTTTTCTGCTATTCTGCCATCCTCAAGACAGTTTTGCAGGCAACAAACAGAAAAAGGCACAGGACTGTAGTGGTGGTGTTATGTATTGTTGCAGCCTTCTTCATCTGCTGGGGACCTTACAATATATTGCTTTTCATCTGCTCTTTGTATGAACCCGAATGCTTTAATGAGGAGGAACACTTTGACATTGCGTATGGAATTTGTCGTATACTTGCTTATTCTCACTGCTGTATGAACCCTCTGGTCTATATGCTCTCACAAAAGTTGCGAAGGTATCTTTTGGATTTTTTACGCTGCGAGAAGGCAAGGAGGAAGAACAGTGAGAGAGGAACTGGCCAGAGCACTTCTGTTTATCAGAATGTAGCTTTTACAGCACACAACTCTGCTGTTATGTTGGAACTACACTCCAAGTAGACTTTTGAAATAAAACGTGTAAATGCTTTTATGTAATGTAATTATATTTATTGAATTCTACTGATGTTTTGACTATTTCCTTAAACATGTGAGGGTATATAAAGAAATTCTAATGCCTGTGTCAgtgtgtaaaataataataataatgtgtgggAATGGTTTTCACTGCTGCACTTTCTCAGCCTTTATGAATGAACTTTGCTGTGCTGTTACTGTAATACATTTGAATTAAAGTAAGCTGGAATCTAA

Function

GO: NA

KEGG:

id description
ko04612 Antigen processing and presentation
ko04672 Intestinal immune network for IgA production
ko05310 Asthma
ko05320 Autoimmune thyroid disease
ko05330 Allograft rejection
ko05332 Graft-versus-host disease

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814724.1 True 2086 mRNA 0.40 2 19789625 19791903

Neighbor

gene id symbol gene type direction distance location
tcea1 tcea1 coding downstream 188153 19593467 ~ 19601472 (-)
atp6v1h atp6v1h coding downstream 216338 19542850 ~ 19573287 (-)
oprk1 LOC104917759,LOC105937811,LOC103479830,LOC108232774 coding downstream 257395 19528163 ~ 19532230 (-)
chmp5a chmp5,LOC103361429,LOC101475708 coding downstream 265143 19519536 ~ 19524482 (-)
bag1 bag1,LOC102796959 coding downstream 273051 19513543 ~ 19516574 (-)
LOC120567779 LOC101467836,LOC102791796,LOC104956506 coding upstream 90999 19882902 ~ 19916863 (-)
LOC120567774 LOC104956512 coding upstream 155337 19947240 ~ 19956332 (-)
ftr67 LOC104956513 coding upstream 164877 19956780 ~ 19962763 (-)
LOC120567785 LOC103359745,LOC104917727,LOC103396371,LOC104956511,LOC102292405 coding upstream 171923 19963826 ~ 19967558 (-)
LOC120567783 LOC102292715,LOC100691961,LOC101465604,LOC102195716 coding upstream 176513 19968416 ~ 19970892 (-)
G116274 NA non-coding downstream 37431 19745702 ~ 19752194 (-)
G116268 NA non-coding downstream 110195 19679189 ~ 19679430 (-)
G116181 NA non-coding downstream 141502 19645322 ~ 19648123 (-)
G116180 vim,LOC107098299 non-coding downstream 148968 19639526 ~ 19640657 (-)
LOC120568771 NA non-coding downstream 156753 19631497 ~ 19632872 (-)
G116293 NA non-coding upstream 88002 19879905 ~ 19882409 (-)
G116292 LOC107655868,LOC106532782,LOC108241678 non-coding upstream 132309 19924212 ~ 19937413 (-)
G116328 NA non-coding upstream 533746 20325649 ~ 20325874 (-)
G116366 NA non-coding upstream 595595 20387498 ~ 20388062 (-)
G116368 LOC101078271 non-coding upstream 598454 20390357 ~ 20391720 (-)
G116138 NA other downstream 324245 19464700 ~ 19465380 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other downstream 566899 19221791 ~ 19222726 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other downstream 854134 18931974 ~ 18935491 (-)
G115941 NA other downstream 943348 18844905 ~ 18846277 (-)
LOC120568909 LOC103353029,LOC104955147,LOC101484702,LOC102780695 other downstream 1069038 18703064 ~ 18720587 (-)
xcr1b.1 NA other upstream 1439 19793342 ~ 19795759 (-)
tmie tmie,LOC102776014 other upstream 1192898 20984801 ~ 20995567 (-)
higd1a higd1a other upstream 1216145 21008048 ~ 21010576 (-)
G116969 NA other upstream 2470095 22261998 ~ 22268559 (-)
LOC120569135 ttc39c,LOC102790819 other upstream 3553815 23345718 ~ 23361580 (-)

Expression


Co-expression Network