si:ch73-257c13.2


Basic Information

Item Value
gene id si:ch73-257c13.2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 29316220 ~ 29318818 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814762.1
ttttcccctcctatcccagaatgcatctgtggtgtagccagaccttactccacagtgctgtggagataaaGCTGGCAATATGAGACTACTGTTTTCGTAAGTTGAAACGTAATCTCTAGGACATTAATAGgacaaaggaaaggaaacaaggGTAGATTGGATAGAGAGACAGTGGGAGAAGCAGGGTTACAGAGAAAGTGATGCAGATGATGTGTGTGAGCACGCATGTGTGTGATGTGCAGAGTGAGGGAGGACGGGCATCAGAGTCAAACAGGGACTGAGTGCAGCATGGGTTaagtgcccaagacaaattaaCCACGatgtgggacaataaagttaatcttGAATCTTGATAAGACTTTCAAACAGACACAAGGTTGTGCCATGGGGGCCTGCTACAGCCCATAATATGCAGGTCTGTTTCTGGAAAAAAATGGGAAGAAGATTTTGTCTTAAACCAGGAAAAGAATGCCTACCTCAAAtacattaggctcgttcgagaagaactgcgcctcgcctgtaaagtggacgagaccAGGCGggagcagccgggggcggtgacaagaAGCCGCGGTCAAGTTGGACACGTTTTCCATCAGCCTTCAAAGCATATAAAGGAAGTCCCACGCATGTTTACATCCTGTTTGATCATCTGTAGGCTACCTGTAGTTTGCAGACATGGTTGAGGAAATCGCATATGTGTTTTTGATGGCTGAGTAAATTGAATATGAAGAGATGCCCCTTCTTATCCACGATGATGGACTTCAACAGGGAAGGTTGGTTCCAAAAATACCACATTTTGTTGAAGTCGTACCTTTGTACAATGTGACTGACTTTAAAAGTCATTTCAGACTGTCGAGAGGACAAGTAGAGGATGTAATGACGATGGTGGGACCATTCTATACAAACAGACAGCATACCAAGTTGCCTGTAACCCACACTGTTCTTGCCTGCCTGTGGACTCTAGCCAACCAGGCTACTAGTCGTATAGAGGTGTTACAGACAGATTTCAAAATCCACCATGTCAACCCATCTCCATCACTTCTGTTCCCTGGTCAACACACATCTGTCACATCACATTTCATGGCCCACAGGGGAAGCACTTCACATATCGcaattacattttcaaacaacAGGAAACAGTTTTACTCCATCATTCTCACCGGATTCTGTGACAGCGAGCGCCGCTTTTGTCATGTCAATGTAGGTCACCCTGGAAGTTGGCACGATGCAAGAGCATTTCGATACACTGATGTAGCACGGCAACTGGAATTGAATCCTCAGGCCCTGGTACTAGAGGGAATGCACATCATTGATGATTCAGCCTACCCTTTGTCGCTACATTTGATGAAGCCCTACAGGGATAACGGGCACCTTACTGTTAGGCAAAGGCACTTTAACAGAAAGCTCAATGCAGCTCGTGTGGCCATTGAGCATGCATTTGGCATCTTAAAGTCAAAGTTCAGGAGGCCTCAAGTGTCTGCACGTGAAAGAAGTGGCAAACATCAGTGCAGCAGTCACAACATGTTGCATTCTACACATTTGTTTAGATTCTGGTGACCGGGTTGATGAAGATGAGCACGATGAGTCTTCTTCAACAGGACATTGAGGATCCACACCCACCACAGCCCAACAACCTTGATGCCTTCCATTACAGAGACATGCTTTGTGCCCACCTTTAAGGATAACATACACTTTAGTTTACAGTCATacccccttttttccccctctttcatttacatttttgtgagCTGATGTGCAGTATGCCACAGGGTGATGTGAGGCACCTCAGGTCAAATGCCAAGTTCAAAGTAGTAATACAATGTTGCAATGTTTTAAAAAGGCTCTAAGGAGGGTTGCAGCAAATGTGTAAGAGTCATTATAACCAATTTAATGACTTTAACTTTTGAGACGGTTACCTTACAGTTTTAATCCTAAGGCATTTTGATTTGAAGTGCCTCTACATCATCAATACTTCTGCTGTGCCTCAGAGTGGCAGCTCATGGTAACTGGGTGGTAGGgctgcttttttcatgctgaatgacttatttccaagaaacgtacgagcacatctctggtaaacacaagaattaaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC107679487

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814762.1 True 2095 mRNA 0.45 3 29316220 29318818

Neighbor

gene id symbol gene type direction distance location
LOC120567683 NA coding upstream 61544 29253394 ~ 29254676 (+)
LOC120567682 NA coding upstream 80232 29234683 ~ 29235988 (+)
LOC120567681 LOC107104891 coding upstream 119858 29195088 ~ 29196362 (+)
LOC120567680 LOC107752212,LOC107675959,LOC107679452 coding upstream 124062 29191093 ~ 29192158 (+)
LOC120567679 NA coding upstream 143208 29171045 ~ 29173012 (+)
LOC120568652 NA coding downstream 197322 29516140 ~ 29546049 (+)
LOC120567686 NA coding downstream 372139 29690957 ~ 29692353 (+)
LOC120567688 NA coding downstream 416702 29735520 ~ 29743592 (+)
LOC120568908 NA coding downstream 713092 30031910 ~ 30033534 (+)
LOC120569089 NA coding downstream 726076 30044894 ~ 30046190 (+)
G118802 NA non-coding upstream 95469 29220360 ~ 29220751 (+)
G118800 NA non-coding upstream 137261 29178729 ~ 29178959 (+)
G118792 NA non-coding upstream 141757 29174212 ~ 29174463 (+)
G118791 NA non-coding upstream 146255 29169759 ~ 29169965 (+)
G118762 NA non-coding upstream 341632 28974201 ~ 28974588 (+)
G118839 NA non-coding downstream 26684 29345502 ~ 29345703 (+)
G118859 NA non-coding downstream 147442 29466260 ~ 29466603 (+)
G118881 NA non-coding downstream 199932 29518750 ~ 29520622 (+)
G118880 NA non-coding downstream 204295 29523113 ~ 29525489 (+)
G118884 NA non-coding downstream 231756 29550574 ~ 29550809 (+)
LOC120568082 LOC101159534,LOC103372818,LOC101069325 other upstream 1146250 28156801 ~ 28169970 (+)
LOC120568664 NA other upstream 1611009 27704001 ~ 27705211 (+)
LOC120568838 LOC103364371,LOC102207447,LOC101475014 other upstream 1706502 27602000 ~ 27609718 (+)
gpr35b NA other upstream 1916824 27394523 ~ 27399396 (+)
LOC120569025 NA other upstream 2133500 27179097 ~ 27182720 (+)
LOC120567689 NA other downstream 644597 29963415 ~ 29969913 (+)
LOC120568595 sdr16c5 other downstream 1250277 30569095 ~ 30677352 (+)
G119114 NA other downstream 1846408 31165226 ~ 31203586 (+)
G119123 NA other downstream 1880142 31198960 ~ 31235565 (+)
G119257 NA other downstream 2141046 31459864 ~ 31460908 (+)

Expression


Co-expression Network