wnt3a (wnt3a)


Basic Information

Item Value
gene id wnt3a
gene name wnt3a
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 21163720 ~ 21178831 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814767.1
GCGCGTATGAGCGCGCATGTAGGCTTTCTGCTGGAGAAGTTTTAGCGAAACTTTAAGGATGATATACCTTGGatgtttcctgttgctctgtgGGCTTACGCATGTCATGGCAAGTTATCCCATCTGGTGGTCACTAGCAGTGGGCCACCAATACTCATCACTGGGCACTCAACCCATCCTCTGTGGCAGCATCCCGGGTCTGGTGCCTAAGCAGCTGCGTTTCTGCCGGAACTACGTGGAAATCATGCCCAGTGTGGCAGAGGGGGTGAAGATTGGCATCCAGGAGTGCCAGCACCAGTTCCGAGGCCGACGCTGGAACTGCACCACGGTCAATGACAATCTGGCCATTTTTGGGCCAGTGTTAGATAAAGCCACTCGAGAGTCAGCATTTGTCCATGCTATTGCCTCGGCGGGAGTGGCATTTGCAGTGACCCGTGCCTGCGCTGAGGGTTCAGCAACCATCTGCGGATGTGACACACGCCACAAGGGCCCCCCTGGTGAGGGATGGAAGTGGGGTGGCTGCAGCGAGGATGTAGAGTTTGGGAGCATGGTGTCCCGGGAGTTTGCTGATGCGAGAGAGAATCGCCCTGATGCACGTTCAGCCATGAACCGCCAAAACAATGAGGCAGGAAGAATGTCCCTTAACGACAACATGTTCCTGAAGTGTAAGTGCCATGGGCTGTCAGGCAGCTGCGAGGTCAAGACATGCTGGTGGTCTCAGCCTGACTTCCGAGTTATTGGCGACTACATGAAGGATAAGTATGACAGCGCATCAGAGATGGTGGTGGAGAAACATAAGGAGTCCCGCGGATGGGTGGAGACCCTGAGACCCAAGTACAACTACTTCAAACCCCCCACAGAGCGCGACCTGGTTTACTATGAAAGCTCACCCAATTTCTGTGACCCCAATCCCGAGACCGGCTCCTTTGGTACCCGCGATCGCATCTGCAACCTGACATCCCATGGCATAGATGGGTGTGACCTCCTCTGCTGCGGCAGAGGCCATAACACCAGGACTGAGAAGAGAAAGGAGAAGTGTCACTGTATTTTCCACTGGTGCTGCTACGTCAGTTGTCAGGAGTGTGTGAGAGTCTACGACGTGCACACCTGCAAATAAGGACGTCTAGTTCTCGTCCTTTTCTCACCAAAATGTAAGACTTCAGTAGGCAGAGGAACAATTACACCAACTTATCTACAAGACATGAGAGACTGAAGAGCTGTCTGATCTGTCCATGGACTCCAGTGGCAAACATAGCAGATTTGTGTTTTGTGCCAAAAAGAGCCAGTCTCTGCCTAATCAACTGAATGGGTTGAGTAGATGTTGACATCACAAATCGTCATCATATTAAcagtgatgatggtgatgatgacaaCCATGTTGCTATCTCTAGCGATGACGAAAGAGTTTTCATGTACTGACGTAGAAAAGGAGAACTGTCGGCCAATTGACAAACACCATAttggtgatatttttttttctttgttccaaATAGTTACTTTTGTTGAGAATAGTACAGCACTGCCAATGCTTTTAAGTCTATGGGGCAAACAATGAAAGTGTCACATTTTCTTCAATGTTTAATCATAACTTGTTTTTGCCACACAAAAGTGACATTTATGAGCAACTTACACGATCAGACACTCAACAGCATGCATTATCCTCAACATTATAAGTATCTGAAAactaacattgttgtgtgaATGAGTTTTATAGTGTTTTTATGTTACTGATGTTTGGGTAAGAATGCACTTGAACCTGAGTGAATGTAGTTATTATGCTGTAATGTGTTTACATATTCTTAAATTCTTAAGCTAACAACTTATTATCTGCTTTCAATTACTAATTTTATCTCGAGAGTAGACATGAGCCACATCAACTGAACATCGGCGAAACAAGAATATACAGTCTGCACATTGTCTTGAAACACCTAAAAACCAgtggaagcttttttttttaagagtaaCAATGCTTTGAACAACATCGATAGTTACAACCAAAGACAAGTAAAGACAAAAAACCTGTAAGTCTGAGGTGGTCAGAGAGCTGTAAATGAATCTGAAAGGTCAGCACTTGTGTCCCATTGAGAAATATGAAGCATGTTCTCCTTGTTTTTATCAGTATTAGCAATGTCTCATGTGAATGGGTGTGGGGAAAACTATTATTTATAAAAGGGATATCCCCActatattttttgtttcatttacacacatatactattctattattttgatatttgattaAATAGAGGTCAACTCTGTACTCCctgataaaataaaacacaaatggcaacaacaacaaaaaacgcaAACTAAGCTGTATTATCTAAGCTCTGTATAATGCAGTATAATTTGCAGTTGTGGTAAAATGATGACCAAAACCTGTGCTATGAGATTATTCTCAGCTGTGGCTTCTTTTTCCCCAAACTAAACAACATGCAGCATCACTGAAACTATCAATACTTCCCTTATTTTAATGCTGCTAAGTAAAGataatatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggtgtgtgttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctaggtcCTTACAGTATGGCTTTGACTATTTGTGTTATATGTATATTCTTGCATGTATTTGATTCTTTCTGTGAAAGAAACCTATTGTAGTTTGGAAAAAAATGTGAAGTTTTGACTAATTATTGCATACAGTAATTTCCATTTTAACCAAATAGACCAAAATAGAGTTTATGTTATTTTAGTTGCCTATGGTTTTGTAGTCATGCTAAACATCAGGGCACAATGATTAATGTTGCTGTCCCTTAATTTGAGAAGAAATACAacacagtatttatttatttggaaaGTGTAAAACTACTGAAACAAAATGCTTATGAAAAAGTGTGCATGCCATTTCACCAATAGCCATGACTATAAAGACATGTGTAAAGTCACTGATGAAATTTTGTTTACAGCCGATGTAATGCTACGTCTCAGGCATGTATAGTTCtcaaacattttaatcaaaGTCGCCTACCCATGATTACTTTTCATCCTGACTGAAAATATTAATGAGCAGCCATAACAAGTTTCACATTTTAAGTCATCTTTAATTAACTACACAGCAACCATTATCAATACAAGATCTGTTATCATGCATTTATTACTGTATACTTTATATGTGATTGATTGCTG

Function

symbol description
wnt3a Predicted to enable cytokine activity and frizzled binding activity. Acts upstream of or within several processes, including chordate embryonic development; post-anal tail morphogenesis; and thalamus development. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including brain; hindbrain neural rod; neural keel; neural tube; and paraxial mesoderm. Orthologous to human WNT3A (Wnt family member 3A).

NR:

description
PREDICTED: protein Wnt-3a

GO: NA

KEGG:

id description
K00312 WNT3; wingless-type MMTV integration site family, member 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814767.1 True 3214 mRNA 0.42 4 21163720 21178831

Neighbor

gene id symbol gene type direction distance location
snap47 snap47 coding upstream 103970 21053381 ~ 21059750 (+)
iba57 iba57 coding upstream 112378 21048354 ~ 21051342 (+)
gjc2 gjc2 coding upstream 118156 21026500 ~ 21045564 (+)
LOC120567629 NA coding upstream 144395 21016902 ~ 21019325 (+)
pth1r pth1r coding upstream 180111 20935435 ~ 20983609 (+)
arf1 arf1 coding downstream 13467 21192298 ~ 21195757 (+)
guk1a guk1,LOC107100458 coding downstream 21886 21200717 ~ 21208684 (+)
abcb8 abcb8,LOC103375355,LOC102789860 coding downstream 106321 21285152 ~ 21290501 (+)
cdk5 cdk5,LOC106599847 coding downstream 112875 21291706 ~ 21298333 (+)
zgc:92591 LOC103479695,LOC101468538,LOC101063387,LOC100696317,LOC105935710,LOC106963471,LOC103358166 coding downstream 249188 21428019 ~ 21428679 (+)
G116583 wnt9a non-coding upstream 29708 21129608 ~ 21134012 (+)
G116538 NA non-coding upstream 133224 21021631 ~ 21030496 (+)
G116529 NA non-coding upstream 134738 20949004 ~ 21028982 (+)
G116514 NA non-coding upstream 282724 20880692 ~ 20880996 (+)
G116507 NA non-coding upstream 335485 20827876 ~ 20828235 (+)
G116616 NA non-coding downstream 64810 21243641 ~ 21244393 (+)
G116657 NA non-coding downstream 91920 21270751 ~ 21326263 (+)
G116723 NA non-coding downstream 275499 21454330 ~ 21500394 (+)
G116746 NA non-coding downstream 435269 21614100 ~ 21662470 (+)
G116794 mapre2 non-coding downstream 655635 21834466 ~ 21838752 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other upstream 248398 20882617 ~ 20915322 (+)
LOC120567833 gbg5 other upstream 788087 20373227 ~ 20375633 (+)
emilin2a NA other upstream 1698339 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 2111478 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 2438273 18720365 ~ 18725447 (+)
LOC120568354 NA other downstream 692122 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 1429218 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 1462679 22641510 ~ 22681293 (+)
kdsr kdsr,LOC102792240 other downstream 2254794 23433625 ~ 23440843 (+)
LOC120567964 dpp6,LOC100710983 other downstream 2413901 23592732 ~ 23685804 (+)

Expression


Co-expression Network