LOC120567763 (btbd2,LOC103376164,LOC107096948)


Basic Information

Item Value
gene id LOC120567763
gene name btbd2,LOC103376164,LOC107096948
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 27246293 ~ 27251271 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814772.1
ATGAAGTGTGTTGTTTACGCCTACTCTCGGTTCAAGATGGCTGCTGGAGACAACAGCGGCAGGCCTCCTTGCCTTAATTTCTCTAGCCCGGGTCCTTTGGGAAACAGCCAGCCCAGCAACAGCGTTTTCTCCATGCCAGCATCCAACGGCGCAGCGGTCGGTACGGCTGGGGGAGCACAGGGAGCAGCGAGGCGTCCCAACCCACAGATGGGGCCTGGCGGGGGAGACAGCAACGGTGTTTCGAGCGGAGCACCGCCGACTGCGCAGAACTCCCTGCAGCAGTCCGCTGCGGCAGGTGCTGCGGCAGCCGGAGTCATGGCCACCCCGGCGTCTAACATGGCAACCACCCCAGCGTCAAATGCGTCGGCGTCGGCAGCACCCACAGCTACTCCGGCAGCTGCGTCTGTGCTGGTCTACCGAGAGCCAGTGTACAACTGGCAGGCAACGAAGAGCACCGTCAAGGAGAGATTTGCTTTCCTCTTCAACAACGAAGTGCTCAGTGACGTTCATTTTTTAGTGGGCAAAGGAATGGGGGTTCAGAGGATACCTGCGCACAGGTTTGTTCTGGCTGTGGGGAGCGCAGTATTTGATGCGATGTTCAACGGTGGGATGGCGACGACCTCAACGGAAATCGAGCTTCCTGATGTGGAGCCAGCTGCCTTTCTGGCCCTGCTAAAGTTTCTCTACTCGGATGAAGTTCAGATCGGGCCTGAGACGGTGATGACCACTCTATATACAGCTAAAAAGTATGCAGTACCAGCACTGGAGGCTCACTGTGTGGAGTTCCTCAAGAAGAACCTGCGAGCAGACAATGCTTTCATGCTGCTCACACAGGCACGGTTGTTTGATGAGCCTCAGCTTGCCAGCCTCTGCCTGGAGAACATCGATAAGAACACTGGAGATGCTCTCGCCGCTGAAGGCTTTACGGACATAGATTTGGATACATTGGTGGCAGTGTTGGAGAGGGATACTCTCGGCGTGAGGGAGGTGCGTTTGTTTGGTGCAGCGGTGCGCTGGGCAGAGGCAGAGGCTCACAGGCAGCAGTTGCAGCCCACACCCGAGAACAAACGCAAAGTGCTGGGCAAAGCTCTCACACTCATCCGCTTTCCTCTCATGACCATTGAGGAGTTTGCTGCAGGTCCAGCCCAGTCCAGTATTCTGACTGACCGAGAGGTGGTGAGTCTCTTCCTCCACTTCACAGTAAACCCAAAGCCTCGCGTGGAGTTCATTGACAGGCCTCGCTGCTGCCTCCGCGGGAAGGAGTGCAGCATCACACGTTTTGGACAGGTGGAGAGCCGCTGGGGTTACAGCGGGACAAGCGACCGCATAAGGTTTTCAGTAAACAGAAGGATATTTGTGGTTGGGTTCGGTCTCTACGGCTCTATACACGGACCCACAGACTACCAAGTTAACATACAGatcatacacacagacagcaacACGGTGCTGGGCCAGAATGATACAGGCTTCAGCTGTGACGGGTCAGCCAACACCTTCAGAGTCATGTTCAAAGAACCAGTGGAGATATTACCCAACGTCAACTACACTGCCTGTGCTACACTGAAGGGCCCGGACTCTCATTATGGGACTAAGGGAATGCGAAAGGTAACACACGAGTCATCGTCTACTGGCACAAAGACGTGTTTCACCTTCTGCTACGCGGCGGGCAACAACAACGGCACTTCTGTAGAGGACGGACAGATTCCCGAGGTCATCTTCTACACATAGTCACCTATGACATAGCAAGGATCTTCCATCAAATGTGACAACCTGACACCAGCGCGGGGCCACGCCTCAGCAGCCGTTCTGGGGACTAATCTCTCAGACATCATACTGTTCCCTCCATATAGTGCACTACTGTCGGCCACACGGGAAGATAAATAGCCGTAAAGCGATGTAGGTCACTACATGGGGCGTAGCGTGTCATTTGAgatgctgtctctctctttctcagcgGCTTCCTTTTATCCCTTTGTGTCGATGTGATGCCAGCCTCTGAAACAGACATGACTGTAACCGACTCCACaacggagggagagagggagagaggagccTCTCAGATTATTCACAGTATTGATGTCACTGCTGTGGATTGACGGCATAAGGCTGAATTCTACTTAAGTTGTACAATTACCCTTCCTGTACTCCACAGCATTAGTGCAAAGGAGTCGCAACTGTATGAATGtacagtttaaaagatttgccAAGACAAGATCCTCATCACGGTTCAGTACAGACCAGCGTTGCACTCAATTCCACATCAGCTGTAACTTCCATAGACCTCATAGGCTTTATGAACTCTGAACCAAAGTTCATATTAATCTTAACAATATGATAATGGCAGGCAATTTTCGGGTTTCTACATACAGTACTATCTGTGATATCTTGTGTCCTTGCTTGGTAGTTGCCTATACCCATGATACCTTGCACTTTTCGGCCTTGCATATGTTCATTTGTTTGTTCTATGGATGCACACTAACTCTTCAGATATGTTTCTTTTTAgctttgttttaaaaagtgtgGGCGGAAGAGCTTTCCGTCTTGGTTCGGAAGTTAAAGGATTGTATATTAAAGTTGCATTTAATAACATTGTATATGTAACTTGAAATAACTATTGATTaaagagtgaagaaaaaaaa

Function

symbol description
btbd2 Predicted to be involved in neurogenesis. Located in P-body.

NR:

description
PREDICTED: BTB/POZ domain-containing protein 2-like

GO: NA

KEGG:

id description
K10477 BTBD1_2; BTB/POZ domain-containing protein 1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814772.1 True 2639 mRNA 0.51 9 27246293 27251271

Neighbor

gene id symbol gene type direction distance location
LOC120568858 mex3d,LOC106923040,LOC106951442,LOC103151246,LOC103479451,LOC105934582,LOC107096960,LOC101078722,LOC104929649 coding upstream 50087 27191141 ~ 27196206 (+)
mbd3a mbd3,LOC104929650,LOC108239474 coding upstream 56063 27183776 ~ 27190230 (+)
map2k2b LOC102194177,LOC104965132,LOC101484555,LOC102792644,LOC100697571 coding upstream 103378 27135001 ~ 27142915 (+)
LOC120567789 NA coding upstream 112142 27131153 ~ 27134151 (+)
LOC120568316 LOC103366679,LOC104964519,LOC102791861,LOC100706611 coding upstream 155993 27038335 ~ 27090300 (+)
LOC120567815 LOC104964637 coding downstream 10389 27261660 ~ 27281330 (+)
LOC120567742 LOC104929666,LOC103364388,LOC102238372,LOC107384139,LOC106526336 coding downstream 35649 27286920 ~ 27291535 (+)
cactin cactin coding downstream 67058 27318329 ~ 27328851 (+)
abhd17aa LOC104964210,LOC102219722,LOC102776363,LOC106951423,LOC103364376,LOC103151229,LOC103479270 coding downstream 182842 27434113 ~ 27442129 (+)
LOC120568637 LOC103375584,LOC102291402,LOC100711435,LOC101486656,LOC102207732 coding downstream 360804 27612075 ~ 27632981 (+)
G118303 NA non-coding upstream 1338 27244749 ~ 27244955 (+)
G118283 NA non-coding upstream 47834 27198183 ~ 27198459 (+)
G118265 NA non-coding upstream 190602 26976298 ~ 27055691 (+)
LOC120568996 NA non-coding upstream 225184 27019846 ~ 27021109 (+)
G118263 NA non-coding upstream 277303 26968504 ~ 26968990 (+)
G118280 LOC108239462,LOC106526414,LOC106536761,LOC107384141,LOC107096963,LOC104964635,LOC106908645,LOC106951439,LOC103151243,LOC102221193,LOC103479455 non-coding downstream 1272 27252543 ~ 27255349 (+)
G118306 eef2,LOC108239462,LOC107552698,LOC107384141 non-coding downstream 7103 27258374 ~ 27261355 (+)
G118409 LOC103364379,LOC104929640,LOC100699176 non-coding downstream 112307 27363578 ~ 27366561 (+)
G118420 NA non-coding downstream 135625 27386896 ~ 27387956 (+)
G118488 NA non-coding downstream 358827 27610098 ~ 27610325 (+)
LOC120569025 NA other upstream 63573 27179097 ~ 27182720 (+)
tcf3a tcf3,LOC103366684,LOC104929652 other upstream 69087 27147061 ~ 27177206 (+)
LOC120568791 LOC103357601 other upstream 307411 26878555 ~ 26938882 (+)
G118234 sugp1 other upstream 360263 26883559 ~ 26886030 (+)
LOC120567599 LOC101062208 other upstream 388899 26839178 ~ 26857394 (+)
gpr35b NA other downstream 143252 27394523 ~ 27399396 (+)
LOC120568838 LOC103364371,LOC102207447,LOC101475014 other downstream 350729 27602000 ~ 27609718 (+)
LOC120568664 NA other downstream 452730 27704001 ~ 27705211 (+)
LOC120568082 LOC101159534,LOC103372818,LOC101069325 other downstream 905530 28156801 ~ 28169970 (+)
LOC120567689 NA other downstream 2712144 29963415 ~ 29969913 (+)

Expression


Co-expression Network