LOC120567764 (LOC107384141,LOC100708490,LOC108239462,LOC107096963,LOC101482186,LOC106526414)


Basic Information

Item Value
gene id LOC120567764
gene name LOC107384141,LOC100708490,LOC108239462,LOC107096963,LOC101482186,LOC106526414
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 27252534 ~ 27261346 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814774.1
TGCCATGCATCCGGCATTCGCACGCAGTAAcagcaagttaacagcagcagcagcagcgtctcTTCTATTACCAACGGGACTGCCTGCTCTGAGGCTGTGTGTTACAGCAATAAACCGTTAAACTCAAAGACCAACGATCTGCAGACAAAATGGTGAACTTCACTGTGGATCAGATCCGCGCCATTATGGACAAGAAGTCCAACATTAGGAACATGTCTGTGATTGCCCACGTGGATCATGGGAAGTCCACTCTGACTGACTCGCTGGTGTCCAAGGCAGGGATCATTGCTTCATCCCGTGCCGGAGAGACACGTTTCACAGACACGCGCAAAGACGAGCAGGAGCGCTGCATCACCATCAAATCAACGGCCATCTCTATGTACTATGAGCTCGCAGATAACGACCTGGCTTTTATCAAGCAATGTGTAGACGGAAACGGCTTCCTCATCAACCTGATTGATTCTCCTGGTCACGTTGACTTCTCCTCTGAGGTCACTGCAGCCCTCAGGGTAACTGATGGAGCCCTGGTGGTGGTGGACTGTGTCTCAGgtgtgtgtgtgcagactgAGACCGTGCTGCGGCAGGCCATCGCCGAGCGCATCAAGCCGGTTCTGATGATGAACAAGATGGACCGGgccctgctggagctgcagcTGGAGCCAGACGAGCTCTTCCAGACCTTTCAGCGTATCGTGGAGAATGTCAACGTCATTATCTCCACCTATGGAGAGGATGAGGCGGGACCCATGGGGAACATCATGatTGACCCTGTTGTTGGTACAGTCGGGTTCGGCTCTGGCCTCCATGGCTGGGCTTTCACCTTGAAGCAGTTTGCTGAGATGTATGTGGCGAAGTTCACTGCGAAAGGAGATGCTCAACTGGGACCAGCAGAGAGGTGTAAGAAGGTAGAGGACATGATGAAGAAACTGTGGGGAGAAAGATTTTTTGACCCAGTTGCTGGCAAGTTCAGTAAGACTGCCACCGGTCCTGATGGGCAGAAACTTCCCCGCTCCTTCTGCCAGCTCGTTTTGGACCCCATCTTTAAGGTTTTTGATGCCATCATGAATTTCAAGAAGGACGAAACAGCCAAACTAATTGAGAAGCTGAACGTCAAACTAGACTCTGAGGACAAGGAGAAAGAGGGGAAGGCCCTGCTGAAGGCCGTGATGCGCCGCTGGCTGCCTGCCGGAGAGGCCCTGCTCCAGATGATCACCATCCACCTGCCCTCCCCCGTCACTGCACAGAAATACCGCTGTGAGCTTCTCTATGAAGGGCCGGGAGACGACGAGGCCGCCATGGGTATTAAAAACTGCGATCCTAAGGCTCCTCTGGTCATGTACATTTCCAAGATGGTCCCAACCACCGACAAGGGTCGTTTCTACGCCTTTGGCCGTGTGTTCTCTGGCTGTGTGTCCACTGGCCTGAAAGTGCGCATCATGGGGCCAAACTATACCCCTGGCAAGAAGGAGGACCTTTACATCAAACCCATCCAGAGGACTGTTCTGATGATGGGCCGGTATGTGGAGCCTATTGAAGATGTCCCATGTGGCAACATCGTGGGTCTTGTTGGAGTAGACCAGTTCCTGGTTAAGACGGGGACGATTACCACCTATGAACATGCCCACAACTTGCGGGTGATGAAGTTCAGTGTCAGCCCTGTGGTCAGAGTTGCTGTGGAGGCCAAGAACCCCGCTGATCTGCCCAAGCTGGTGGAGGGACTGAAGCGTCTGGCCAAGTCTGACCCCATGGTGCAGTGCATCATCGAGGAATCCGGGGAGCACATCATCGCCGGAGCAGGAGAGCTGCACCTGGAGATCTGCCTGAAGGACCTGGAGGAGGACCACGCCGGCGTTCCACTGAAGAAATCAGACCCAGTCGTGTCTTACAGAGAGACGGTGACGGAAGAATCGTACCAGATGTGTCTGTCCAAGTCCCCCAACAAGCACAATCGTCTCTTCatgaagtcccgccccttccccGACGGCCTGGCTGATGATATCGAGAAGGGGGAGGTCGGCCATCGCCAGGAGCTCAAGGTCCGTGCCCGCTACCTCGCCGACAAGTATGAGTGGGAGGTGACAGAAGCCAGGAAGATCTGGTGCTTCGGCCCAGACGGAAGCGGGGCCAACCTGCTGGTAGACGTGACAAAGGGGGTTCAGTACCTCAACGAGATCAAGGACAGCGTCGTGGCTGGTTTCCAGTGGGCGACTAAAGAGGGCGCTCTATGTGAGGAGAATATGCGCGCAGTTCGCTTTGACATTCACGACGTGACGCTGCACACAGACGCCATCCACCGCGGTGGAGGACAGATTATTCCCACAGCTCGTAGGGTCCTGTACGCCTGCCAGCTCACCGCTCAGCCACGACTCATGGAGCCTGTGTACCTGGTGGAGATACAGTGCCCGGAGCAGGTGGTCGGTGGCATCTACGGCGTGTTGAACAGGAAACGAGGACATGTGTTTGAGGAATCCCAAGTGATTGGCACTCCCATGTTTGTGGTGAAAGCCTACCTTCCTGTCAACGAGTCCTTTGGGTTCACAGCTGACCTGCGCAGCAACACTGGAGGCCAGGCCTTTCCTCAGTGTATTTTTGACCACTGGCAGATTCTACCTGGAGACCCCAGCGACCCCACCACTAAACCCTTCCTGGTTGTCGCTGAAATCAGGAAACGCAAAGGTCTAAAAGAGGGCATTCCTGCCGTAGACAACTACTTGGACAAACTGTAAACGCTGAGCCCAGGTTATAAAATACCAAATCAATCTCTAGACCCTACCCCGTGGGCACTTTAAATCTTTGCACAGGCTTAAAGACACATCGCACAAATTGTTTTGACTTTGAGTCCGGAGCAGAAACAAAGCTTTAAACTTTTGTTGTAGGCTAGTGGAAGCagtgatgctttttttcatttcacagCTACAGTACACCAAGTGCCTAGGGTGAGGGTTTGGGGGAACAATTGGATCAAAGCAGTTGTATTCCTTGTTTCTTCTATTCCTCCACatcttccccctttttttccccccctcttaTCTGCCAGGATGGGCCTTTACAGTGCACTGTGATACTGCTGCAATAATGCATATTAACATGGATCCTTGGCCAGATAAAACTATAAAAGCCACAAGAAAGTGTTACAGAATTCCAACTCCCTGCATTCGACCGTTGTTCAGTGGATGtattaataaaaacatacaaCTCATGATGA

Function

NR:

description
PREDICTED: elongation factor 2

GO:

id name namespace
GO:0042221 response to chemical biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0009790 embryo development biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K03234 EEF2; elongation factor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814774.1 True 3205 mRNA 0.53 14 27252534 27261346

Neighbor

gene id symbol gene type direction distance location
LOC120567762 LOC101482480,LOC102795251 coding downstream 8093 27211015 ~ 27244441 (-)
onecut3b onecut3,LOC103366680,LOC106923038,LOC107096950,LOC102305143 coding downstream 144808 27095802 ~ 27107726 (-)
LOC120567768 NA coding downstream 250482 26998041 ~ 27002052 (-)
plekhj1 plekhj1 coding downstream 261761 26986732 ~ 26990773 (-)
LOC120568414 LOC102790141,LOC102302803,LOC104929656,LOC105934591,LOC102195635,LOC100696847,LOC101486463 coding downstream 267488 26977016 ~ 26985046 (-)
sirt6 sirt6 coding upstream 34024 27295370 ~ 27307660 (-)
LOC120567993 LOC104929644,LOC104964218,LOC103364385,LOC106951435 coding upstream 48959 27310305 ~ 27317595 (-)
sema4e LOC103364382 coding upstream 67736 27329082 ~ 27338096 (-)
stap2a LOC103364380,LOC104964213 coding upstream 77765 27339111 ~ 27344282 (-)
LOC120567871 sh3gl1 coding upstream 83216 27344562 ~ 27360321 (-)
G118339 NA non-coding downstream 52845 27198582 ~ 27199689 (-)
G118337 NA non-coding downstream 54886 27174552 ~ 27197648 (-)
G118328 NA non-coding downstream 62301 27119032 ~ 27190233 (-)
G118401 NA non-coding upstream 32937 27294283 ~ 27295300 (-)
G118482 NA non-coding upstream 317622 27578968 ~ 27609694 (-)
G118483 LOC103364371,LOC101475014,LOC102207447,LOC108239424 non-coding upstream 341055 27602401 ~ 27605241 (-)
G118504 NA non-coding upstream 366540 27627886 ~ 27664712 (-)
G118608 LOC103372824 non-coding upstream 833677 28095023 ~ 28099810 (-)
cirbpa cirbp other downstream 427964 26819838 ~ 26824570 (-)
G118175 NA other downstream 586582 26661621 ~ 26665952 (-)
camk2n1a camk2n2 other downstream 932939 26315770 ~ 26319595 (-)
G117732 NA other downstream 2329216 24922203 ~ 24923318 (-)
G117560 NA other downstream 2716038 24499380 ~ 24536496 (-)
LOC120568986 epha4,LOC100711706 other upstream 381981 27643327 ~ 27675360 (-)
G118524 NA other upstream 452121 27713467 ~ 27718759 (-)
metap1d metap1d,LOC102783095 other upstream 884925 28146271 ~ 28152770 (-)
G118764 NA other upstream 1724745 28986091 ~ 28986319 (-)
G118856 NA other upstream 2159033 29420379 ~ 29420652 (-)

Expression


Co-expression Network