LOC120567765


Basic Information

Item Value
gene id LOC120567765
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13389221 ~ 13392603 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814775.1
TCCAATCAATCGCAAAATGTCCGGCAGTACTTGAAGGCAGCATTGACTCGGAGTAGCTCGGTTACTATGTTTACTTCACTGTTGCGATGCAACGACAGTCTGTCCCACTGATAGAAAAGTAGCTAGTTAGCTTACCTTAAAACGAGAAAACCTAGGCATTACAGGAGAGTTTTAGAATAATTAGCTAGTACTTTAGCTAAGTTGCAGTCGCTTTATCTTCCTCAATGAGCAGTTTAGAGTGTTTGGGGAAATCCTCCACCAGTTCACAGAAACAGTTGACAGCAGAAGTCCCCTCTGCAAATGctgagacacacaaacccagTGACCAAGTTTGGGAAAAGACAGTCATCAGGGACATTAAACCTCGCAGGAGTCTTCCTGCCCGGACACCGCCTCGTTCTGTGAAGgTTTTTTGCCAGGAGACTCAAAAGTTTGGGTTTCCAAGTGGGGATTTGCTGGATGCAGACGAGTGCTCACCAAAGGAATCCATCAGCATAACACCAAGGGTTGATAAACGCACACAGTTGACTGCAGTGCCTGATGAAGAGCTGAAAATGAAAGACCTGAGGAAGCCCCCAGACTCAATACTTATTGGAGGAACAACACATTCTCCTCCACCAGCTGAGCCTCTCCCCACACATGGGCCAAATGGAGAGGAAGAACAGACAGAAGAAGAGGATGCTGGGGATGAGGAACGAAAGGCACCAGTGGAGCTGATAATGGAGTTCCTCAGAGCTGTGATGGACAGAGACTTCCAGCTGGCCAGCAAACTGTGTCAGATGATTCTCATCTATGAACCAGACAATCCTGAGGCCTCTGAGTTTCTCCCGCTGATCCAGAAGAAGCTGTTGGAGGAGCAAGAGGCAGAGCAGAAcactgaggaggaggaagaagaagaagaagaagaagtagatGGGGATAATGATGACTCCGATAACTCCGGGAGTGATGAGGAGTCATCTCAGAGCTCAAACTGTTCCTCTTCAGCTTGCTCCTCCTCGTCACCATCagatgatgattatgatgatgaaGAAAAGCAAGTAGACAGACACAAGCCGTGTCCTACTTCTCACATTTCTTGCTAAATCTATTGTACCAATACAACAGAAGCAATGTTAGACACTGTCACCAGATATCTCTGCTAATAGCGTCTTGGAACAGTCTATGTGCATTTTGTAGATGTTGTGACAAtgatgcatttttttcaaattacacATGCAAATTAAATATGTATTGTGGACAAAGCTGATGCCCCTGTTTGCTGAAAAAGTAAACTTATAAACATGCCATTAATAACA
>XM_039814776.1
ATCAAATTCCAATCAATCGCAAAATGTCCGGCAGTACTTGAAGGCAGCATTGACTCGGAGTAGCTCGGTTACTATGTTTACTTCACTGTTGCGATGCAACGACAGTCTGTCCCACTGATAGAAAAGTAGCTAGTTAGCTTACCTTAAAACGAGAAAACCTAGGCATTACAGGAGAGTTTTAGAATAATTAGCTAGTACTTTAGCTAAGTTGCAGTCGCTTTATCTTCCTCAATGAGCAGTTTAGAGTGTTTGGGGAAATCCTCCACCAGTTCACAGAAACAGTTGACAGCAGAAGTCCCCTCTGCAAATGctgagacacacaaacccagTGACCAAGTTTGGGAAAAGACAGTCATCAGGGACATTAAACCTCGGAGTCTTCCTGCCCGGACACCGCCTCGTTCTGTGAAGgTTTTTTGCCAGGAGACTCAAAAGTTTGGGTTTCCAAGTGGGGATTTGCTGGATGCAGACGAGTGCTCACCAAAGGAATCCATCAGCATAACACCAAGGGTTGATAAACGCACACAGTTGACTGCAGTGCCTGATGAAGAGCTGAAAATGAAAGACCTGAGGAAGCCCCCAGACTCAATACTTATTGGAGGAACAACACATTCTCCTCCACCAGCTGAGCCTCTCCCCACACATGGGCCAAATGGAGAGGAAGAACAGACAGAAGAAGAGGATGCTGGGGATGAGGAACGAAAGGCACCAGTGGAGCTGATAATGGAGTTCCTCAGAGCTGTGATGGACAGAGACTTCCAGCTGGCCAGCAAACTGTGTCAGATGATTCTCATCTATGAACCAGACAATCCTGAGGCCTCTGAGTTTCTCCCGCTGATCCAGAAGAAGCTGTTGGAGGAGCAAGAGGCAGAGCAGAAcactgaggaggaggaagaagaagaagaagaagaagtagatGGGGATAATGATGACTCCGATAACTCCGGGAGTGATGAGGAGTCATCTCAGAGCTCAAACTGTTCCTCTTCAGCTTGCTCCTCCTCGTCACCATCagatgatgattatgatgatgaaGAAAAGCAAGTAGACAGACACAAGCCGTGTCCTACTTCTCACATTTCTTGCTAAATCTATTGTACCAATACAACAGAAGCAATGTTAGACACTGTCACCAGATATCTCTGCTAATAGCGTCTTGGAACAGTCTATGTGCATTTTGTAGATGTTGTGACAAtgatgcatttttttcaaattacacATGCAAATTAAATATGTATTGTGGACAAAGCTGATGCCCCTGTTTGCTGAAAAAGTAAACTTATAAACATGCCATTAATAACA

Function

GO: NA

KEGG:

id description
ko05016 Huntington disease

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814775.1 False 1298 mRNA 0.45 12 13389228 13392603
XM_039814776.1 True 1302 mRNA 0.45 12 13389221 13392603

Neighbor

gene id symbol gene type direction distance location
LOC120568688 lect1 coding upstream 103043 13279076 ~ 13286178 (+)
LOC120568782 pcdh8 coding upstream 110792 13274162 ~ 13278429 (+)
LOC120568679 NA coding upstream 165367 13213316 ~ 13223854 (+)
trnae-cuc_17 NA coding upstream 171011 13218139 ~ 13218210 (+)
mcm6 mcm6,LOC106569474 coding upstream 206014 13176825 ~ 13183207 (+)
LOC120568628 LOC103354350,LOC103478943,LOC107086843,LOC100704451,LOC101473770 coding downstream 1885 13394488 ~ 13410455 (+)
LOC120568788 gorasp2,LOC103354349,LOC101074307,LOC105930246,LOC106513812 coding downstream 19350 13411953 ~ 13420965 (+)
LOC120568709 LOC103354345,LOC100697448 coding downstream 94858 13487461 ~ 13554660 (+)
anxa13l anxa13,LOC100703370 coding downstream 162982 13555585 ~ 13566467 (+)
LOC120568315 NA coding downstream 185629 13578232 ~ 13592369 (+)
G114063 NA non-coding upstream 33171 13354254 ~ 13356050 (+)
G114032 NA non-coding upstream 100218 13288193 ~ 13289003 (+)
G114055 NA non-coding upstream 102002 13286650 ~ 13287219 (+)
LOC120568783 NA non-coding upstream 134636 13250751 ~ 13254585 (+)
G114037 NA non-coding upstream 182198 13204825 ~ 13207023 (+)
G114094 NA non-coding downstream 76908 13469511 ~ 13472357 (+)
G114095 NA non-coding downstream 80411 13473014 ~ 13473251 (+)
G114271 NA non-coding downstream 266439 13659042 ~ 13659381 (+)
G114301 NA non-coding downstream 340079 13732682 ~ 13732963 (+)
LOC120567951 NA non-coding downstream 350672 13743275 ~ 13840945 (+)
si:ch73-71c20.5 NA other upstream 202857 13183284 ~ 13186364 (+)
ndufb3 ndufb3 other upstream 263758 13123030 ~ 13125463 (+)
rpl37a rpl37a,RPL37A other upstream 271865 13114596 ~ 13117356 (+)
col6a1 col6a1 other upstream 314627 13010575 ~ 13074594 (+)
LOC120569010 NA other upstream 428872 12952548 ~ 12960349 (+)
LOC120568245 LOC103365337,LOC101481118,LOC102206401,LOC102290843 other downstream 894547 14287150 ~ 14295993 (+)
rgs18 rgs18,LOC106918816,LOC103139989,LOC103479038 other downstream 1593174 14985777 ~ 14993083 (+)
ro60 trove2 other downstream 1621140 15013743 ~ 15026208 (+)
G114789 NA other downstream 1759193 15151796 ~ 15157199 (+)
LOC120568540 LOC108238308,LOC100706341,LOC103359463,LOC106530177,LOC102798013,LOC101474556,LOC102303803 other downstream 1945954 15338557 ~ 15368780 (+)

Expression


Co-expression Network