LOC120567768


Basic Information

Item Value
gene id LOC120567768
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26998041 ~ 27002052 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814779.1
CTTGGCTGTCAGAGTTCAGAGCGTGACTCTGCTGCCATCTCTGCAAGGGGAACAACAGGctctgtgacaaaggttcccaGACGCTGCCCAGGGGGACCCCAAATGTTGAGGGAAGGTATGGAAGAAAGCTATGACACATTTGAAGAGGAGTTAGGGCCACCAAGAGCAGATCCTCCTCCACTTAAGCCTGTTCGACAGATCTGCAGACCAGAAATGTACGCGACAAGGAAAGTCAGAGAGGAAATGCCTCCATTTTCACAGCAACCAAGAGCCGAACCCAAGATTTTACCCAGGGAACCCAGCTTCTCCAGAACAACATCCTTGCATAAAGCTGTGTCCATCCAAAACCTGAACCAGGTTGACAGACCGTGGGAGAACGTCACCCTCAACCGCTGTCTGTTTGTGGCCATTACCATCCTGGTGCTCACCTCAGGCTTTCACAGGCTTCATGaaagtCTGCGCGGTCAGGGGAGagcagaggatgaggaggaagtTGAACTGACAGTGAGACGGTCAGGCCTATTGAGACACAGGGGACAACCACCACAGCCCGAGACAACTCTTTGGGAGGTCATGCTTTGGTGGCTGCCAGACCTtgatgatgaagaggatgaggaggacgATGATGATGACGGAGAAGTCAAAAGAGGAAAGACAAAGAGGGGAGCGACAGCACGAGCATACAGAGGTCTCAGAAACAAGCCACTGCCAGACAAAAAACTCATGAAACCAAAAGGAGGGAAAATAAAGGACAGGAGGGCCAGGAAAGTCAGGAACGAagaaatcaaagacaagaaagaaagagatacAAAGGAGGAACCTAAAGAAGCAGCAGATGAGGAAGATGAGGATGAAGGAATAGAGGAACAGCCAGAGAAGAATAAAAAGctggaggaaaagaaagagaagaaaaagactcAAAAGGGATGAGTTCATTCTTTCTACAGTGGCAGAGGCCATGTCATTTTCTAAACAATGTTCACCTGAATAGATTCGATAACATTAATTAAAAGGAGGAAATATTGAACTcaatgaaagattttttttctattaaatcTTTCAAATACCATGAGGCTCAAAAATAATGTGTGCTTTCAGTTAAATGACCTCAATGTGTTACAGATATTGTTGCTTTGGTAGACAGATTTGCTTTGAGTTACCTGCAAAGACATTTAATGTGCTGACTGCATTATTTAAAATAACCATGTGATCATTTGATTTTCTTCGTGTTGAACGATCTACAACAGCTTTAATAAACTGCTTGTCAATCATGCCAGCTCA

Function

GO:

id name namespace
GO:0005212 structural constituent of eye lens molecular_function

KEGG:

id description
ko04371 Apelin signaling pathway
ko04260 Cardiac muscle contraction

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814779.1 True 1281 mRNA 0.45 7 26998041 27002052

Neighbor

gene id symbol gene type direction distance location
plekhj1 plekhj1 coding downstream 7268 26986732 ~ 26990773 (-)
LOC120568414 LOC102790141,LOC102302803,LOC104929656,LOC105934591,LOC102195635,LOC100696847,LOC101486463 coding downstream 12995 26977016 ~ 26985046 (-)
sugp1 sugp1 coding downstream 108144 26881797 ~ 26889897 (-)
stk11 stk11 coding downstream 117274 26855335 ~ 26880767 (-)
LOC120568902 NA coding downstream 164659 26825716 ~ 26833382 (-)
onecut3b onecut3,LOC103366680,LOC106923038,LOC107096950,LOC102305143 coding upstream 93750 27095802 ~ 27107726 (-)
LOC120567762 LOC101482480,LOC102795251 coding upstream 208963 27211015 ~ 27244441 (-)
LOC120567764 LOC107384141,LOC100708490,LOC108239462,LOC107096963,LOC101482186,LOC106526414 coding upstream 250482 27252534 ~ 27261346 (-)
sirt6 sirt6 coding upstream 293318 27295370 ~ 27307660 (-)
LOC120567993 LOC104929644,LOC104964218,LOC103364385,LOC106951435 coding upstream 308253 27310305 ~ 27317595 (-)
G118308 LOC107384102,LOC105934594,LOC104929657,LOC103366675,LOC108239475,LOC103395958,LOC102222760 non-coding downstream 34289 26960400 ~ 26963752 (-)
G118186 NA non-coding downstream 265957 26731877 ~ 26732084 (-)
G118165 NA non-coding downstream 396656 26532167 ~ 26601385 (-)
G118076 NA non-coding downstream 518363 26477463 ~ 26479678 (-)
G118075 NA non-coding downstream 523085 26473887 ~ 26474956 (-)
G118321 NA non-coding upstream 77955 27080007 ~ 27142908 (-)
G118328 NA non-coding upstream 116980 27119032 ~ 27190233 (-)
G118337 NA non-coding upstream 172500 27174552 ~ 27197648 (-)
G118341 NA non-coding upstream 177060 27179112 ~ 27182570 (-)
G118345 mbd3,LOC104929650,LOC108239474 non-coding upstream 181656 27183708 ~ 27187200 (-)
cirbpa cirbp other downstream 173471 26819838 ~ 26824570 (-)
G118175 NA other downstream 332089 26661621 ~ 26665952 (-)
camk2n1a camk2n2 other downstream 678446 26315770 ~ 26319595 (-)
G117732 NA other downstream 2074723 24922203 ~ 24923318 (-)
G117560 NA other downstream 2461545 24499380 ~ 24536496 (-)
LOC120568986 epha4,LOC100711706 other upstream 641275 27643327 ~ 27675360 (-)
G118524 NA other upstream 711415 27713467 ~ 27718759 (-)
metap1d metap1d,LOC102783095 other upstream 1144219 28146271 ~ 28152770 (-)
G118764 NA other upstream 1984039 28986091 ~ 28986319 (-)
G118856 NA other upstream 2418327 29420379 ~ 29420652 (-)

Expression


Co-expression Network