zgc:113531 (LOC104917724,LOC100692768,LOC101464837,LOC104948902,LOC102196942)


Basic Information

Item Value
gene id zgc:113531
gene name LOC104917724,LOC100692768,LOC101464837,LOC104948902,LOC102196942
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 20020348 ~ 20024640 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814823.1
AACCTCCACCCCCTTCCGGACTCTTTGCAGAAGTGTGCGCAGCCCCAGTAGACCGCTGTCGGAGGAGGACTGAGGTAATGCCAAAGATATTTGCGTCCAGTAACAATGTAACAAACTCGGGTAATCTGTCTACCAAATCCCAGCTGGACTGCAGTGGCTGTTTCTTGGtaaccttttgttttgttttggagAAGGTGAATCAAATAAATCAACATGGTTTTCAGTGAGCGCCTTTCCTTTGAGCACAGAATACGCACGGCCGTTTTGGCACTACTGCTTTGCGCACAGGCCGGTTTTGGCTTCTCAGTCGGCACACAGCAGGAAAGCACCTGCGAGGCCAACGGCAGCATATACTTTGTAGGGGAATGGTATTTTCTGGACTCTGATCACTGCACCCAGTGTGAATGCACCACCGAGGGCTCCGCATGTTCCCGCACTGAGTGCACTTCGCTCCCGGCTGCATGCATCCATGTCAGCCACTACCCCACCGACTGCTGCCCCAGGTGCGAGAAGATCGGGTGTGAGTATCGAGGAGTGGTGTACGAACTGGGACAGAACTTCCAGCCATCAGAATGTGAGCAGTGCACTTGTGACAATGATGGCATCGCCCGCTGTCTAGTTGCAGATTGTGCCCCTCCACCATGTGTCAACCCTGTCTACCAGCCTGGGAAATGCTGCCCTGAATGCAGGGAGGGTCCTAACTGCTATGTTGATGCATCACGCAGCCAGGTGATTCCTGCAGGAGAACCCATCTGGGTCGACTCCTGCACCAAGTGTCGTTGTCACGATGGTCAGGATGCCGGCTACTGGGAGGGAAACCGTCTCGCCACCTGTTCCCGCCTCAAAAACTGTACACCTGAACAACAGTCTACCAAGAAAAACTGATTCCCTCTGCCAGCAAAGAACCAGCTGTTACCCTGAAGTATACAGTCCCTGATGGCTGATCAACTGCACAGCTTCGACCCTTTAAGAACATGCTGAACCCTCGTGCTGCTGAAAATAGATAATCTGCAACTTCAAAAATTCCAAGTTTTTTGGGAACAGAACTGAACAAGAAccaaataaatcatttaaaacaaacaccaAAAGCCATCAGAACAGAACAGCTGCCATTCCACAAGGACTTTTCATCCAGGATTTCTGAAGTACTGAAGAGAACCACTGAATTTGCCACTTTGGTGGACAAGGCTGCCCATTATCAGAACATAGCTAAATATTACAAGCAAGGTCGAAATTCAAAGCTGATTAGACAGACCGGTCAAAGCTCCAGGTTCTCTGTATGTCAGTGGATTTTGGGAATTTGATTACCTGCAAAGTATAATATCAACAAAGACATCATTATATAACGTTGTGGTCCTGTTATGTAGATGGACTCAGACTCAATATCTGGATATAATAACTTTATTAGTTTAGAATATATTCTGCTTCCATGATGCATATTCCTAAATTTAGTTGCAGTGTTTAATCAAATTACCACAAACTAACTGAGTACACAATGCATAGATGGTGGTCGGTGGAGGATCAATCCCTAATACCTAAATCAggccatattttattttaagaatAACAGACTTTATCCCGTTAGCCGAGAAGATGGTTTGTAGTCCTTGTAAACCACTGATAACAGAGAAATTATGAAGGAAATCAAAACTAAAACTCTCCacttaataatataatatggatGCAGTGATGGAAAAATTAGATGTTTTATTTACAGGGTCTCAAACACCCTCAACCCCTGAGCCTAACAGGAAAATTTATAATTAAACAATTCTGGCGGGAACTAGAACAAACTTGTACCTTGAAAGGTGACCGCATTCAAGATATTTACCCTTTAATATTTTATCTGCCTGTCCACGGTTTCTTTCAAAAAGTTTTTAGAGTTTTAAGAGGGAGAGAATAGTAAACTTTTATACAAGCTAGTTACCCAGGAGGCATACTTTTTAATTTCCAGACACCTGCTTTGGGAAACAACTGGCAATATAACAAGGCCAATGAGATTATTGGATGATAAGAAATTGTAATTGACCTGTCACGGGTTGATGCACCAGCCAAATGTATGCACAGCTGTGATGCAATTTAGACTAGGAAATGGCTTAGCAAAGCAATTAACAATTTGTAACTGTCCTATAAATTCTACAGTTCAATTTCCAGACTAATTGAAATAGAAAATATGAGACTATGGCCTAACAAATGACTGTATAGTAGTTGTAGACAGAAGGGATATTTGAAAGGGTTGTTATTTGTGCATGTACACTGTAGAGCAGGAAAAACAATCTATAATGAACTGCTTTATTAATTTCTCATTAGAAATAATGTGTAGACTTTCTTAGAAATAGCCTGTTATTTCCACTGTTATCAAAGAAATTGACCCTCTTTAGAAAGATCTTCAGTGTATGATGAAAGAGAAGTGTATTGTCattttatataggtttatatgCAGCAGATCTTCTTACTATTATTTGTCATTATCTACCAATTTAATCATGAGGGATCTTTGAATGAAAACCAAAAATGATATTTTCTTGTTATGTTACTGTATGTGCAGTGTTGAAGCCTATAATGGCATTTACTGTACTTTATAAATAAGACTCCCAAGCTGCTGCTTTATTAAGTACTGTCATTACAACTGACACGTTTCACTGCCCTAATTCTCCCTGAAAAGCTTCTTTATGCAAGTTTGGGATTAAGTTGAAACATTTAGGGTTATGGACACcttttaaatcatattttatcAGGAGGCTTTATGAATGAATACactctttttacattttctcgAGGGGAGTATTCAAATCAAACGGTGGCCGTAGAATACGATCTGAAAGCTGTTCTTCCATATTTATCATCTTAATTACCGAATAATCAGAAAGACACaaggttaaaggaatagtttgacatttgtgaaatatgtgtatttcatttcttgctgagagttcaATGAGAAGAGTGGTTTTAATCTGCTCATCAAACTCTCAGCAAAAAAAACCTtgaatgtcaaactattcctttaagtggAGTTTAAATTTACTGCCTAAATTAAAAGGGAACCCAAATTAATCACACCCACAAATCATGTAGTGTGCCATGCTGGTAATAAACACCAGCATCTTGTAAAATTTC

Function

NR:

description
PREDICTED: von Willebrand factor C domain-containing protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814823.1 True 3120 mRNA 0.40 3 20020348 20024640

Neighbor

gene id symbol gene type direction distance location
eef1da LOC106532782,LOC101466496,LOC102194655,LOC102290633,LOC103361414 coding upstream 72878 19921315 ~ 19947470 (+)
LOC120567775 adcyap1r1,LOC103396405,LOC102193585,LOC100710985,LOC104917732 coding upstream 137920 19854988 ~ 19882428 (+)
LOC120567771 NA coding upstream 193376 19802991 ~ 19826972 (+)
neurod6b neurod6,LOC102793566,LOC102311402,LOC101472195 coding upstream 248184 19769289 ~ 19772164 (+)
pde1cb pde1c,LOC108232872,LOC103135697,LOC103479836,LOC102794047,LOC100712431,LOC103361422 coding upstream 268715 19648419 ~ 19751633 (+)
kiss1ra gpr54,LOC102788056,LOC101463985,LOC104942405 coding downstream 212164 20236804 ~ 20252137 (+)
LOC120568950 atp5l,LOC108233819 coding downstream 309721 20334361 ~ 20336124 (+)
LOC120568873 NA coding downstream 314863 20339503 ~ 20347484 (+)
bcl10 bcl10,LOC102797731 coding downstream 332476 20357116 ~ 20359100 (+)
mcoln3a LOC104953893 coding downstream 335643 20360283 ~ 20366532 (+)
G116216 NA non-coding upstream 117529 19902243 ~ 19902819 (+)
G116215 NA non-coding upstream 134649 19884595 ~ 19885699 (+)
G116214 NA non-coding upstream 147299 19872633 ~ 19873049 (+)
LOC120567786 NA non-coding upstream 179544 19836814 ~ 19840804 (+)
G116204 NA non-coding upstream 185975 19833123 ~ 19834373 (+)
LOC120567788 NA non-coding downstream 177485 20202125 ~ 20203738 (+)
G116322 NA non-coding downstream 290248 20314888 ~ 20315271 (+)
G116327 NA non-coding downstream 297648 20322288 ~ 20322541 (+)
LOC120567944 NA non-coding downstream 623965 20648605 ~ 20654150 (+)
G116461 NA non-coding downstream 666979 20691619 ~ 20691985 (+)
emilin2a NA other upstream 554967 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 968106 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 1294901 18720365 ~ 18725447 (+)
LOC120568691 NA other upstream 1346208 18660429 ~ 18674140 (+)
skila skil,LOC102782637 other upstream 1418085 18566633 ~ 18602263 (+)
LOC120567833 gbg5 other downstream 348587 20373227 ~ 20375633 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other downstream 857977 20882617 ~ 20915322 (+)
LOC120568354 NA other downstream 1846313 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 2583409 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 2616870 22641510 ~ 22681293 (+)

Expression


Co-expression Network