LOC120567783 (LOC102292715,LOC100691961,LOC101465604,LOC102195716)


Basic Information

Item Value
gene id LOC120567783
gene name LOC102292715,LOC100691961,LOC101465604,LOC102195716
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 19968416 ~ 19970892 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814824.1
TGCGTCagttatgcttttattttgaaggctgTAGCCGAAGTATATTAAAAGGGTATCAAAACTATCTTGTTGTACAGCACGCGTTGCGTAGAGAGCTGGTGCTGGTATGCTGTCGACTCCGCAGATCTGAGTGGAATCAGGAGGAATCAGGAATCAGCAGAGAGATGTGGTGGGTCCTGTGGGTGCTCGCCGCCTTGCTGGTTCTCTTCTGCAGTCTGGATGTGTGGTACTTCCTCCGGGTAGCTGCTGTGATTCTCCGGGCTTGGTTCCAGCCTCCAATCTGGGATGTCACAGCAGAGCAGATCCAAACAGGCCGGGTCACTCCCCATGACATTGACATGTGCCACATGAACAATGCTCGTTACCTCCGGGAGTGTGACTTTGCCCGCTTCTCTCTCTACATACGTAATGGTGTGTTCAAGGCGTTGCGAGCACTCAAAGCTTCAATGGTAGTGGGGGCCACCACCATCCGTTACCGCAGGGCTCTGTGTATAGGTGAGGGGTACGAGCTGCGGAGTCGTATCGTCACTTGGGATGACAAAGCCTTTTTCCTGGAGCAGAGATTTGTGTCAACAAAAGATGGGTTGGTGTGTGCTGTCATGTACTGCAAGCAGAGCATCATACGCAGCAGCCCAGACAAGATCATGCAGCACCTGTGTAAGCGGAAGGTTGAGTGCCCTGAGTTTCCAGAGGACCTTCAGCACTGGGTCAACTTCATCTCGGCCAGCAGCCAGGCCCTCCGAGCCGAGAGTGGACTAGACGAGAAGAACAAATAAGACATTGCATGGGCAGCTTTAAGACTGGCTTTTTGTAAGACCATCTCAGGATTAAAAAGGCATTGGTTTTCTGTTCACATTACTTGACTTAAACACAGTCGTGCCTACGCATCTGAAATGAGCGTTACTTAGACCCCAATACTTACCTATGTCAACACTGGAAGAACTAGCACAGCAGGCTAAAAAACCAATTACTCTTCAGTAATAATAAAGTAATATGATTGTACAAAGTCTATCTTCGTGTACTATGgcagcaataaaaacaaactgattTTGAA

Function

NR:

description
PREDICTED: protein THEM6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814824.1 True 1054 mRNA 0.48 3 19968416 19970892

Neighbor

gene id symbol gene type direction distance location
LOC120567785 LOC103359745,LOC104917727,LOC103396371,LOC104956511,LOC102292405 coding downstream 858 19963826 ~ 19967558 (-)
ftr67 LOC104956513 coding downstream 5653 19956780 ~ 19962763 (-)
LOC120567774 LOC104956512 coding downstream 12084 19947240 ~ 19956332 (-)
LOC120567779 LOC101467836,LOC102791796,LOC104956506 coding downstream 51553 19882902 ~ 19916863 (-)
LOC120567744 NA coding downstream 176513 19789625 ~ 19791903 (-)
LOC120567772 NA coding upstream 598 19971490 ~ 19993721 (-)
ccdc24 NA coding upstream 23233 19994125 ~ 20020261 (-)
LOC120567781 NA coding upstream 24641 19995533 ~ 19998081 (-)
b4galt2 b4galt2 coding upstream 55167 20026059 ~ 20207494 (-)
atp6v0b atp6v0b,vato,LOC102788333 coding upstream 237818 20208710 ~ 20218795 (-)
G116292 LOC107655868,LOC106532782,LOC108241678 non-coding downstream 31003 19924212 ~ 19937413 (-)
G116293 NA non-coding downstream 86007 19879905 ~ 19882409 (-)
G116274 NA non-coding downstream 216222 19745702 ~ 19752194 (-)
G116268 NA non-coding downstream 288986 19679189 ~ 19679430 (-)
G116181 NA non-coding downstream 320293 19645322 ~ 19648123 (-)
G116328 NA non-coding upstream 354757 20325649 ~ 20325874 (-)
G116366 NA non-coding upstream 416606 20387498 ~ 20388062 (-)
G116368 LOC101078271 non-coding upstream 419465 20390357 ~ 20391720 (-)
LOC120568747 NA non-coding upstream 609628 20580520 ~ 20585677 (-)
G116484 rock1 non-coding upstream 797743 20768635 ~ 20771028 (-)
xcr1b.1 NA other downstream 172657 19793342 ~ 19795759 (-)
G116138 NA other downstream 503036 19464700 ~ 19465380 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other downstream 745690 19221791 ~ 19222726 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other downstream 1032925 18931974 ~ 18935491 (-)
G115941 NA other downstream 1122139 18844905 ~ 18846277 (-)
tmie tmie,LOC102776014 other upstream 1013909 20984801 ~ 20995567 (-)
higd1a higd1a other upstream 1037156 21008048 ~ 21010576 (-)
G116969 NA other upstream 2291106 22261998 ~ 22268559 (-)
LOC120569135 ttc39c,LOC102790819 other upstream 3374826 23345718 ~ 23361580 (-)
G117259 vps4b other upstream 3459474 23430366 ~ 23430992 (-)

Expression


Co-expression Network