LOC120567796


Basic Information

Item Value
gene id LOC120567796
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 27686164 ~ 27688056 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814839.1
AAGCTTATATATTCAGTAACGTCTCTGCTGGTTCTCCACATTTGTAACATGGCTCCCAGAGGGATGATCGCCGTGACAACTGTTCTCCTCTGCTTCATACTGGGCCTGCTCGGTCCAACTCCAGCTGCCCtggGTTCCCATATGGGCAAAGCCTGTTGTACGAGATACAATAGAAAGCCAGTACCTTTCCAGCGTATAAAGGGCTACAGAGAACAAACCACCAAGGAGAACTGCCACATCGAGGCCATCATTTTCTACACTGTTAAGAAGAATGAGGTATGTGCTACACGGAGGGATGAGTGGGTGAGGAAAACTCTGGAACTACTCAGTTCCAAACTAAGGAAGATGTCCAGGACCGACTCTGCTGCAGGCGAAAGCAACAGAGAAGCAGATGGACCTTTCGTCACAGAAGCCTTCCGGAACAGCACCGAAGCTTTCTATTAGCAAAAACCAGGTTGTGATCTTAAAGAAGATATCTGGAATGAAATCATTTGTGTTATAGAAATGCCAATTTGAGGTAACATTTGAGAGGAATTGAACCTAGTATAATCCAGTCATGTTTGGGGATATttactctaaaaaaaaaaaaaaagaagtaaaagaaTAGAAATGGCTTTCACTTGCACAAACATACGCAGCGTCAGCATATAATCATGACTAAACGGGAACCTGAGAGCAGCTTTGAGACTATTGCTGTAGTCTATGTGCTTAGCcatgatgtgtttttttaaatcgtgCTTTCAGGACTGTGCTATTTCATTGCCTGCTATGAATCTGCTGCATAATCAAGTTATTGTCCTGAAATATGCCAATAGCAATTATCTTAACCAAATAAATTTACTCAATAATA

Function

GO:

id name namespace
GO:0050896 response to stimulus biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814839.1 True 850 mRNA 0.42 4 27686164 27688056

Neighbor

gene id symbol gene type direction distance location
LOC120568637 LOC103375584,LOC102291402,LOC100711435,LOC101486656,LOC102207732 coding upstream 53183 27612075 ~ 27632981 (+)
abhd17aa LOC104964210,LOC102219722,LOC102776363,LOC106951423,LOC103364376,LOC103151229,LOC103479270 coding upstream 244035 27434113 ~ 27442129 (+)
cactin cactin coding upstream 357313 27318329 ~ 27328851 (+)
LOC120567742 LOC104929666,LOC103364388,LOC102238372,LOC107384139,LOC106526336 coding upstream 394629 27286920 ~ 27291535 (+)
LOC120567815 LOC104964637 coding upstream 404834 27261660 ~ 27281330 (+)
epha4b LOC103372263 coding downstream 50936 27738992 ~ 27838118 (+)
dnah9l LOC103372266,LOC102781332,LOC102213424 coding downstream 272846 27960902 ~ 28025246 (+)
LOC120567659 NA coding downstream 398761 28086817 ~ 28104458 (+)
pcyt1aa pcyt1a coding downstream 504859 28192915 ~ 28203729 (+)
clstn2a LOC102305044,LOC102198559,LOC100692037,LOC101467236,LOC102787137 coding downstream 585611 28273667 ~ 28473545 (+)
G118488 NA non-coding upstream 75839 27610098 ~ 27610325 (+)
G118420 NA non-coding upstream 298208 27386896 ~ 27387956 (+)
G118409 LOC103364379,LOC104929640,LOC100699176 non-coding upstream 319603 27363578 ~ 27366561 (+)
G118306 eef2,LOC108239462,LOC107552698,LOC107384141 non-coding upstream 424809 27258374 ~ 27261355 (+)
G118280 LOC108239462,LOC106526414,LOC106536761,LOC107384141,LOC107096963,LOC104964635,LOC106908645,LOC106951439,LOC103151243,LOC102221193,LOC103479455 non-coding upstream 430815 27252543 ~ 27255349 (+)
G118514 NA non-coding downstream 956 27689012 ~ 27690687 (+)
G118537 NA non-coding downstream 256195 27944251 ~ 28042190 (+)
G118549 NA non-coding downstream 348405 28036461 ~ 28037330 (+)
G118564 NA non-coding downstream 431211 28119267 ~ 28119624 (+)
G118575 LOC103372819,LOC108239494 non-coding downstream 488431 28176487 ~ 28178341 (+)
LOC120568838 LOC103364371,LOC102207447,LOC101475014 other upstream 76446 27602000 ~ 27609718 (+)
gpr35b NA other upstream 286768 27394523 ~ 27399396 (+)
LOC120569025 NA other upstream 503444 27179097 ~ 27182720 (+)
tcf3a tcf3,LOC103366684,LOC104929652 other upstream 508958 27147061 ~ 27177206 (+)
G118234 sugp1 other upstream 800134 26883559 ~ 26886030 (+)
LOC120568664 NA other downstream 15945 27704001 ~ 27705211 (+)
LOC120568082 LOC101159534,LOC103372818,LOC101069325 other downstream 468745 28156801 ~ 28169970 (+)
LOC120567689 NA other downstream 2275359 29963415 ~ 29969913 (+)
LOC120568595 sdr16c5 other downstream 2881039 30569095 ~ 30677352 (+)
G119114 NA other downstream 3477170 31165226 ~ 31203586 (+)

Expression


Co-expression Network