LOC120567803 (LOC104934906,LOC103364073,LOC103479012)


Basic Information

Item Value
gene id LOC120567803
gene name LOC104934906,LOC103364073,LOC103479012
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14561507 ~ 14564705 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814845.1
ttTCTTCAGATTCAAAATGTTCCACCTCCGTCCTTCTGCGtgttcactcacacacagctgatgacaaaACGTCTCACAGCACCTTACACTGAGGATGCAGGGAACTTCTTCACCTTAATCCACGGAgaagaagtgtttttttcttcttcttttctgtatTCATTCGCCTGCTGCATCATGAGCGCTGAATGCAGCAGTTACCACAGCGCTGACGGCGTGTTTGTGGACGGATTCTCATGCCCCAGACCGGGCAATGCCGTTGCTGCTGTCTACTGCTGCGGATTTAACGATGTCAAGTATTGCTGTGACGATCCCAACAGTTTTTTCCCGTATGAGTACGGATACATGTGGTGGCTGAGtaTCGGCGCTCTGGTTGGTCTATCCATTGCAGCGGTGGTCCTCCTTGCCTTCCTCATcactgtgtgtgtcctctgctACCTTTTCATCGCCACCAAACCCAGTTGTCTTGACAACGGCCTACCCCTCAGAACGCCAGCAGGAGATCCCAGTGAAGGACCCAGTCATGGGAGAGCGACCTGCGTCTCTGGTCCACAGGGATTCAGGAAACACTTCATGAGCAGGAAACTGGACTGTGATAACCAGCCGCCAGACCCCGAGCTCCTGTTCCAGAGGTGTTTCACAGCTACCGCCACCGGTCTGAAAGTGGAAAATCCTTCGTAGGCCGCAGAGAtacttgttgttaaaaaaaaataaaaaatgaggcCAGCAGTCCAGAAATCAAGAGAGTCAGTGTGTCTGAAGGCAGAATGCGCTACCAGGGAACTgctgggacaaaaaaaaaaaacactctgaggGCTTTGAATCAAAATTGCGTAAGCGTACACAATGAAAGCTCTCAAACACATGGATTCAATTTCTTCAGACACTAAATGACTCATAACGCATACGTGTTTCAGCACCCTGCAGCAGTAATTAAGAATGGATTGGAACGAATTATCCACCATCTTCTTGGAACATAAGGTGTTTAAGTGGCCTCAAGAAAGCCAAACCCTTGTTGAATTATTAAGGCATATGGTAGGGGGGACTGAGGACATAGGCCTGTTAAGATCCAGTTTACACTCAGGATGCACAGTTTCATGTGAGCCAAGACAACAGCAGAGTCTAGGACAGCTAGGCTATAAAGTCAGGGTGCACCCTGGTGAAGTAGGGTGCTGTATACTTGTAACCACATCTGCTATATTTTACTCAGGGACTGAAGGATTTGTGGGGAAGCTCTACAGTGTGAGGAGACCAGAAAAATGACAGCGCTGGTTATTAATTCAAGTGCATTAGATGACAAGAGACTTCTTGTAATCATTAATGTTTGACTGTCTCCTACCAACACtcagagctgtttttttttttttaaccaagacCAATTTCAGCCAGAGACACATCAAGGAactgacttttctttttaaaagatgAATTTTGGCAGTTTTGCCTCCACAGTAATTGACAGCTGCCAGTGAAAGAGGCAGACACGGAAATAGCAGAGAGAGTGGTATGACAAAGGTCCCCAGCTGGAATGAATTGAACATTTATTGCAAATGGTTGTACACTTTGCTCTTTACAGCAATGGCGCTCTCAAGATAATCTAAGTCTCAACATGGATTCTGCTGAGATGTGATAATAAAGACATACAAGAACACTAAATCTTATTTAAATTGACAATACCAAAATGATAGCACATAAGGAGGACGTTGGGGCAGTGGAGCTTGCTGTGGCAGTATCAGAATAGCAACAGTGATAGGTGCCAAGTTAAAATGGCCCACTCTAAACCTGCCTAGACCTGCATGAATATGATTGGATATAAATAGTGAGCTGAGTGAATGAGCCAGGGAATGTGAAGCATGCAGTGTTGTATGGCAAAAAAGTTGAACCTGGCTCAACTTTTCCAATCAAATCCATGCATGAGTACACATTCCTGGTAGATTACTTCACAACAAGTACACCATGTTTCTAATGATTATGTGATTAAAGATAAGAATTGTCACTGTGAGTTGTAAATTCACACATCTGCTACTCAAACTAGACTTTCTTGATTGTATTTCATAGCTCACCTGAAAGAGACAATCAGTAGGATTTtcctaaaaaaacaatgtattctAATACAAAAGTAATCTCTCTCAATCATTACTTATGAGCCACCAGAAGCGTGTGGCGGTGTCTGTATCTACAGGGACCCTGCCCTCTGACTGGATTTTCTTACTTTACTGTGTTGGGGATGGTTCTGGGAGTCAGCCTCTATAAAAACCTAGCGACCAGGTGCCAGATTGTTACCACACATCCAATACGGAGCTACAAAAATGGTAACCAtcatggacctttttcacagcagacattttgacttgtcatagtaggaaaagcacagcag
>XM_039814846.1
ttTCTTCAGATTCAAAATGTTCCACCTCCGTCCTTCTGCGtgttcactcacacacagctgatgacaaaACGTCTCACAGCACCTTACACTGAGGATGCAGGGAACTTCTTCACCTTAATCCACGGAgaagaagtgtttttttcttcttcttttctgtatTCATTCGCCTGCTGCATCATGAGCGCTGAATGCAGCAGTTACCACAGCGCTGACGGCGTGTTTGTGGACGGATTCTCATGCCCCAGACCGGGCAATGCCGTTGCTGCTGTCTACTGCTGCGGATTTAACGATGTCAAGTATTGCTGTGACGATCCCAACAGTTTTTTCCCGTATGAGTACGGATACATGTGGTGGCTGAGtaTCGGCGCTCTGGTTGGTCTATCCATTGCAGCGGTGGTCCTCCTTGCCTTCCTCATcactgtgtgtgtcctctgctACCTTTTCATCGCCACCAAACCCAGTTGTCTTGACAACGGCCTACCCCTCAGAACGCCAGGAGATCCCAGTGAAGGACCCAGTCATGGGAGAGCGACCTGCGTCTCTGGTCCACAGGGATTCAGGAAACACTTCATGAGCAGGAAACTGGACTGTGATAACCAGCCGCCAGACCCCGAGCTCCTGTTCCAGAGGTGTTTCACAGCTACCGCCACCGGTCTGAAAGTGGAAAATCCTTCGTAGGCCGCAGAGAtacttgttgttaaaaaaaaataaaaaatgaggcCAGCAGTCCAGAAATCAAGAGAGTCAGTGTGTCTGAAGGCAGAATGCGCTACCAGGGAACTgctgggacaaaaaaaaaaaacactctgaggGCTTTGAATCAAAATTGCGTAAGCGTACACAATGAAAGCTCTCAAACACATGGATTCAATTTCTTCAGACACTAAATGACTCATAACGCATACGTGTTTCAGCACCCTGCAGCAGTAATTAAGAATGGATTGGAACGAATTATCCACCATCTTCTTGGAACATAAGGTGTTTAAGTGGCCTCAAGAAAGCCAAACCCTTGTTGAATTATTAAGGCATATGGTAGGGGGGACTGAGGACATAGGCCTGTTAAGATCCAGTTTACACTCAGGATGCACAGTTTCATGTGAGCCAAGACAACAGCAGAGTCTAGGACAGCTAGGCTATAAAGTCAGGGTGCACCCTGGTGAAGTAGGGTGCTGTATACTTGTAACCACATCTGCTATATTTTACTCAGGGACTGAAGGATTTGTGGGGAAGCTCTACAGTGTGAGGAGACCAGAAAAATGACAGCGCTGGTTATTAATTCAAGTGCATTAGATGACAAGAGACTTCTTGTAATCATTAATGTTTGACTGTCTCCTACCAACACtcagagctgtttttttttttttaaccaagacCAATTTCAGCCAGAGACACATCAAGGAactgacttttctttttaaaagatgAATTTTGGCAGTTTTGCCTCCACAGTAATTGACAGCTGCCAGTGAAAGAGGCAGACACGGAAATAGCAGAGAGAGTGGTATGACAAAGGTCCCCAGCTGGAATGAATTGAACATTTATTGCAAATGGTTGTACACTTTGCTCTTTACAGCAATGGCGCTCTCAAGATAATCTAAGTCTCAACATGGATTCTGCTGAGATGTGATAATAAAGACATACAAGAACACTAAATCTTATTTAAATTGACAATACCAAAATGATAGCACATAAGGAGGACGTTGGGGCAGTGGAGCTTGCTGTGGCAGTATCAGAATAGCAACAGTGATAGGTGCCAAGTTAAAATGGCCCACTCTAAACCTGCCTAGACCTGCATGAATATGATTGGATATAAATAGTGAGCTGAGTGAATGAGCCAGGGAATGTGAAGCATGCAGTGTTGTATGGCAAAAAAGTTGAACCTGGCTCAACTTTTCCAATCAAATCCATGCATGAGTACACATTCCTGGTAGATTACTTCACAACAAGTACACCATGTTTCTAATGATTATGTGATTAAAGATAAGAATTGTCACTGTGAGTTGTAAATTCACACATCTGCTACTCAAACTAGACTTTCTTGATTGTATTTCATAGCTCACCTGAAAGAGACAATCAGTAGGATTTtcctaaaaaaacaatgtattctAATACAAAAGTAATCTCTCTCAATCATTACTTATGAGCCACCAGAAGCGTGTGGCGGTGTCTGTATCTACAGGGACCCTGCCCTCTGACTGGATTTTCTTACTTTACTGTGTTGGGGATGGTTCTGGGAGTCAGCCTCTATAAAAACCTAGCGACCAGGTGCCAGATTGTTACCACACATCCAATACGGAGCTACAAAAATGGTAACCAtcatggacctttttcacagcagacattttgacttgtcatagtaggaaaagcacagcag

Function

NR:

description
PREDICTED: membrane protein FAM159A isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814845.1 True 2377 mRNA 0.44 3 14561507 14564705
XM_039814846.1 False 2374 mRNA 0.44 3 14561507 14564705

Neighbor

gene id symbol gene type direction distance location
LOC120567737 NA coding downstream 7838 14551037 ~ 14553669 (-)
LOC120568348 lrp8 coding downstream 24042 14461472 ~ 14537465 (-)
LOC120568914 LOC104950559 coding downstream 125301 14430089 ~ 14436206 (-)
LOC120567626 LOC103364420,LOC104948953 coding downstream 131949 14422482 ~ 14429558 (-)
LOC120568976 leprot coding downstream 141310 14416830 ~ 14420197 (-)
scp2a scp2 coding upstream 61462 14626167 ~ 14651376 (-)
czib LOC103363808,LOC100704007 coding upstream 88703 14653408 ~ 14658272 (-)
uck2b LOC104935075,LOC103363741,LOC102787436,LOC100703739,LOC101481213 coding upstream 94167 14658872 ~ 14667205 (-)
zte38 LOC104949683 coding upstream 109712 14674417 ~ 14677944 (-)
prdx1 prdx1,LOC103140020 coding upstream 114702 14679407 ~ 14683559 (-)
G114544 NA non-coding downstream 43614 14517476 ~ 14517893 (-)
G114530 NA non-coding downstream 95259 14418851 ~ 14466248 (-)
G114538 LOC104949927,LOC103364340 non-coding downstream 113574 14440881 ~ 14447933 (-)
G114518 NA non-coding downstream 240744 14319343 ~ 14320763 (-)
LOC120568036 NA non-coding downstream 390033 14124703 ~ 14171474 (-)
G114633 NA non-coding upstream 124752 14689457 ~ 14690066 (-)
G114636 NA non-coding upstream 128927 14693632 ~ 14693957 (-)
G114661 NA non-coding upstream 186540 14751245 ~ 14751528 (-)
LOC120569096 NA non-coding upstream 215571 14780276 ~ 14782472 (-)
LOC120568695 NA non-coding upstream 389873 14954578 ~ 14958403 (-)
tfr1a NA other downstream 592696 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 1079282 13469531 ~ 13482225 (-)
G114152 NA other downstream 1472944 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 1586179 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 1792882 12760748 ~ 12768625 (-)
LOC120568687 NA other upstream 48908 14613613 ~ 14618224 (-)
G114680 NA other upstream 231213 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 725377 15290082 ~ 15304610 (-)
G115164 btf3l4 other upstream 1579455 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 1617949 16182654 ~ 16201698 (-)

Expression


Co-expression Network