LOC120567821 (LOC101487896,LOC103365967)


Basic Information

Item Value
gene id LOC120567821
gene name LOC101487896,LOC103365967
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14225001 ~ 14227666 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814879.1
aagaaagaaagaaagaaaaaatatataaattaagtGGAGACAGTGTCCTCTGAAAAGAGGAGGATAAACAGTTGCATCCCTGCAAAATTTCCCTAAACCACAAGATCATTTACTCAGTCTGACCCTCCAGAATGTGGCTCCAGgtgtctctcctctgtctgtcctggTTAAGTCTGCCCAGCCAAAGCCAGGCCCAAGACCGAGCCGTCCTCCGCCGATCCAATGACCACGGCGGGCGCTGCCATTACACCTTCACCGTGGCCAGTCCAGAGGATTCCAGCTGCTCCGGAAGCAGCATCAAACCAGAGATGGATGGAGTCTTGTCCCGACTCACCCTGCTCGAGGCTTTAGTCAGCCGTCTGATAGCAGGAGTGGATGGCCCTGCCGGGACTGGGGTAAGGGCTAACGGTGAAGAGGGTTTCCCGGAAGATTACTCCCAGGTAACAAGGGAAAGAAACCAGCTGCAGCAGGACAAGGAGCGTCTGAACGGGCAGGTCCTGGAGCTGCAGAGGAGGCTGGCCGAGCTGAGCCAGGAGGCAGAGAGCCTCAGGCAGAAACCCTGCCAGCAGACACACACCTCAGGGGGGACTCAGCGTGAAAACAGACCTGCCAGTGACCCTGCATATGATTTGGGGAAAGGTGCATACCAGGAGATGAAGGCTGAGGTTACGGAGGTTGCAGCATCCCACCTCATTCCTGAAGGAAATCACAACTTCACAGgcTGTGAAGAGCTGCAGTCAGTGGGAGATCCTGTGTTGCACAGGAAGGCTGACAGCATTACAGGGAAGTATGGAGTGTGGCTGCAGGATCCTGAGCCTCAGGGCCTTCTTTACACAAACAAGACTGTGTGGCGTATCGACACAGTTGATAAAGATGTCCGTCAGCTCTTTGCATATGAAGACATGGATCAATTATCCCAAGGCTTCCCTATGAAGGTCCTGGTCCTGCCAGAGCCTATGGAGAGCACAGGGGCGACCATGTTCCGTGGCTCCCTTTACTACCAGCGCAAACGCAGTCGCACCCTGATCCGTTATGACCTGACGTCTGAGAGCCTGGCATCACGCGTGGAGCTGCCTCACGCTGGCTTCCATGGCCAGCACCCTTACTCTTGGGGCGGCTACACTGACATCGACCTGGCAGCGGACGAACAGGGCCTGTGGGCTATCTACAGCACAAGCAAGGCAAAGGGTGCAATTGTGATTTCCCAGCTGGACCCCGAGAGCCTGGTTGTGAAGAGGAGCTGGGAGACCAACATCAGGAAGAACACAGTGGCCAATGCTTTCATGATGTGTGGACGCCTTTACACAGTAGCCAGCTACACTGCACCCAACACCACCATCAACTACGTGTTTGACACGGCCACCGGCATGGGGCGGGCTGTTGCTGTGCCCTTCAAGAACAAGTACCGTTACAACAGCATGGTGGACTACAACCACGCTCAGAGGAAGCTGTACGCTTGGGACAACTTCCACATGGTCACCTATGACGTAAGACTGGGCAGGGCGAGCCAAGGCAGCATCTAAagaagacacaaacagagagaaacGGCTGTTTACAGGACTGCGCTGACGCAAGAGCAAGTGAATGAGATAAAACATATAATCATTTGCATTGTACTGAAGTTATTGCAAGTCTATATGTTTTCACAttataaaaacctttttttttttaaatactatttTATAACTATTGTAAATAAGATCTATTATGGCAACAGAAATATATTCATAAAGCAGATTAATGTAGTTATGATAGAGCCCTTTATGATCACAGTGGTCATTACAAACAGTAATCATGGTTTAAAGTTGTGAAATATTTTTGTTATCTGCTTAAAAATGTGGACGTTGTTTAAGTTCTCAATAAACATAAATTGTCGTAGGCCTAATTTGGTTTccaattcaattaaaaaaatattcactCTTATTCAATGTGTGTGTACACTCCGCTGATAAGAGTGAAAAAGTGATATAATGGTGACTACTACATGTATTTAGTGTTTAGTATCTTCTCCACGTACAGTGAGATGCCTGTTGT

Function

NR:

description
myocilin

GO: NA

KEGG:

id description
K23027 MYOC; myocilin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814879.1 True 2034 mRNA 0.49 3 14225001 14227666

Neighbor

gene id symbol gene type direction distance location
c8a NA coding upstream 169479 14049498 ~ 14055522 (+)
rgs11 rgs11 coding upstream 231403 13985299 ~ 13993598 (+)
LOC120567849 LOC104930846,LOC103354334,LOC100696120 coding upstream 524118 13688421 ~ 13700883 (+)
LOC120567846 LOC103354336,LOC103398841,LOC101469236,LOC104930847,LOC100702297 coding upstream 575205 13645229 ~ 13649796 (+)
yme1l1b LOC103354339,LOC104952441 coding upstream 584837 13630258 ~ 13640164 (+)
LOC120567998 prdx6,LOC101487422,LOC103365780 coding downstream 7461 14235127 ~ 14238123 (+)
LOC120568001 jun,LOC104967900 coding downstream 29893 14257559 ~ 14259688 (+)
mgst3a mgst3 coding downstream 91009 14318675 ~ 14321387 (+)
LOC120568146 LOC103364811,LOC100690866 coding downstream 102925 14330591 ~ 14340646 (+)
LOC120568347 NA coding downstream 213203 14440869 ~ 14454235 (+)
G114398 NA non-coding upstream 50416 14173992 ~ 14174585 (+)
G114376 NA non-coding upstream 168549 14055693 ~ 14056452 (+)
G114371 NA non-coding upstream 184765 14038682 ~ 14040236 (+)
G114350 NA non-coding upstream 253720 13971065 ~ 13971281 (+)
LOC120567951 NA non-coding upstream 384056 13743275 ~ 13840945 (+)
G114428 NA non-coding downstream 85936 14313602 ~ 14314015 (+)
G114429 NA non-coding downstream 86637 14314303 ~ 14314633 (+)
G114488 NA non-coding downstream 110156 14337822 ~ 14341341 (+)
G114550 NA non-coding downstream 330699 14558365 ~ 14560677 (+)
G114561 NA non-coding downstream 398501 14626167 ~ 14626770 (+)
si:ch73-71c20.5 NA other upstream 1038637 13183284 ~ 13186364 (+)
ndufb3 ndufb3 other upstream 1099538 13123030 ~ 13125463 (+)
rpl37a rpl37a,RPL37A other upstream 1107645 13114596 ~ 13117356 (+)
col6a1 col6a1 other upstream 1150407 13010575 ~ 13074594 (+)
LOC120569010 NA other upstream 1264652 12952548 ~ 12960349 (+)
LOC120568245 LOC103365337,LOC101481118,LOC102206401,LOC102290843 other downstream 59484 14287150 ~ 14295993 (+)
rgs18 rgs18,LOC106918816,LOC103139989,LOC103479038 other downstream 758111 14985777 ~ 14993083 (+)
ro60 trove2 other downstream 786077 15013743 ~ 15026208 (+)
G114789 NA other downstream 924130 15151796 ~ 15157199 (+)
LOC120568540 LOC108238308,LOC100706341,LOC103359463,LOC106530177,LOC102798013,LOC101474556,LOC102303803 other downstream 1110891 15338557 ~ 15368780 (+)

Expression


Co-expression Network