usp14 (usp14,LOC102778130)


Basic Information

Item Value
gene id usp14
gene name usp14,LOC102778130
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 20782255 ~ 20792499 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814887.1
GATGATCTGGGTGTGTGTAGTCTGGGTACATTTCATAGGCAGGATGGCTAGCCGATGTCAGCGCGCATCGATAAGTTCCCAGCGTGTTGTTGCAGCGTCATTCTGTTTGAATGAAGTTCAGTCTGAGAACTAGCTAACTCTTTATTCGCGCCCGGGTCGATTGGAACAGGAAAAAATAAAGAGTTGAGGAAGTAAAAGGTTGCCAAATATGCCGGTGTTTACAGtAAATGTGAAATGGGGCAAAGAGAAGTTTGATGCTGTTGAGCTGAACACTGAGGAACCACCCATGGTTTTCAAGGCTCAGCTCTTTGCCCTGACAGGAGttcagccagacagacagaaggtcATGGTGAAGGGAGGCACTCTGAAGGATGACGAATGGGGGAAcattaaactgaaaaatgGAATGACTCTGCTGATGATGGGCTCAGCAGAAGCCTTGCCTGAGGAGCCTGCTGTCCGGCCCATGTTTGTAGAGGACATGACTGAGGAGCAGCTGGCCTCAGCGATGGAGCTGCCTTGTGGGCTGACAAACTTGGGCAACACCTGTTACATGAATGCCACAGTGCAGTGTCTGCGCTCTGTCCCAGAGCTCAAAGCTGCACTCAGAAGGTATACAGGTGCTCTGCGATCATCTGGGGCAAATGCACCATCACAATATATCACAGCAGCCCTTCGTGACTTGTATGAGACCATGGACAAGACTTCATCTAGCCTGCCACCCATCATTTTGCTGCAGTTCCTTCACATGGCCTTTCCACAGTTTGCTGAGAAAGGGGACCAGGGACAGTACCTCCAGCAGGATGCCAACGAGTGCTGGCTGCAGATGATGAGAGTGCTTCAGCAAAAATTGGAGCCACTAGAGCCAGAGACTTCCATGGAGACTGAGTCTGAGAGCGGAGCTGCCTCTACAAAGAAGAACTTAATTGACCAGTATTTTGGCGTAGAATTTGAAACTGCTATGAAATGCACAGAgtctgaggaggaggagccAATCAAGGGCAAGGAAAGCCAGCTCCAGCTCAGCTGCTTCATCAACCAAGAAGTCAAATACCTTGCAACAGGACTAAGACTGAGACTGCAGGAAGAAATCACAAAAATGTCTCCATCCTTGGAAAGAAATGCCCTGTATATAAAATCTTCAAAACTCAGCCGTCTCCCTGCCTACTTGACTGTTCAAATGGTTAGATTTTTCTACAAAGAGAAGGAGTCTGTCAATGCAAAAGTCCTTAAGGATGTCAAGTTCCCTCTCATGCTCGATGTCTATGAGCTGTGCACTTCAGAGCTCCAGGAGAAAATGCTGCCGATCAGGTCAAAGTTCAAGGAGGTTGAGGACAAGAAGCTAGAGGAACAGCAGAAAAAGgTGGTGAAGACGCCAAGTGCAGCAAAAGTGAAATATGAGGCTTTCTCCTTCCCTGATGACCTCGGTTCCAACAACAGTGGCTACTATGACCTGCAGGCtgtgctgacacaccaaggccGCTCTAGCTCCTCTGGTCACTATGTGGGCTGGGTCAAGAGGAAAGAAGATGAGTGGGTCAAGTTTGATGACGACAAGGTGAGTCTGGTGTCTCCAGAGGATATCCTGCGACTGTCTGGTGGCGGGGACTGGCATATAGCATACGTTCTACTGTACGGCCCCCGGCGGCTGGAAATACTTGAAGAGGAACAGTAGCTGTGGAAGATTTCCTAGAAGACAGACAACATCCAACACACGTACAAATGCCATTTCCAAGCACTGTCTGCATAGATGTGCAATAAAACTGGTGTCTTTAAAGATTTGATGAccttaattttgttttgttttttttgtaaccaACACGGATGCTTGTAAAACAAATTCTGTGAAATGGTGTTAAATATTCAACTATAGTGGGCTTTGAAAAAGGAGATGATGAGATTGGATTCTTAAGAGGATTTTAAGTCTAGCTCTgcagtttaattaaatgttttatacacattgtatattttttaaagccTTTGATAAGGTGCTCATATCATAAAAGCAAAATGTTTCTCTTTAGTCATTTAATCAACTTGTACAAACATGCCTAGCCAAGCTGTTGTCCTTGACATTCTGGCTTGTATCTTCTCAGATGTATAATGAAGATTTTCACGTAACACTGTCAAGACTTGCCCTTGTTCACCTGTTGGCTCTCTGGGAAACTTGGGTTCAATCTCAGTGCTTGGCTCACATCGTCTCCTGCACTTGTTTTCCCATGTGTTGACAGATGAGGTTTCTTCTGCCAAATCTTCACTAAtgtatttttttgggggtgagGAAGTGTGTGGGGAAACTGCTTTAGAACAGGTTGCCCTTGTGATGAACTGTGTGGTTAAATAAAGACTTGAGATTAAACCTTGATGGTTTACTCAA

Function

symbol description
usp14 Predicted to enable thiol-dependent deubiquitinase. Predicted to act upstream of or within protein deubiquitination and ubiquitin-dependent protein catabolic process. Predicted to be part of proteasome complex. Predicted to be active in nucleus. Orthologous to human USP14 (ubiquitin specific peptidase 14).

NR:

description
PREDICTED: ubiquitin carboxyl-terminal hydrolase 14

GO:

id name namespace
GO:0006511 ubiquitin-dependent protein catabolic process biological_process
GO:0004221 obsolete ubiquitin thiolesterase activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG:

id description
K11843 USP14, UBP6; ubiquitin carboxyl-terminal hydrolase 14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814887.1 True 2377 mRNA 0.46 16 20782255 20792499

Neighbor

gene id symbol gene type direction distance location
rock1 rock1 coding upstream 2510 20741261 ~ 20779745 (+)
abhd3 abhd3 coding upstream 92625 20677357 ~ 20689630 (+)
npc1 npc1 coding upstream 258716 20507410 ~ 20523539 (+)
egfra LOC103369338 coding upstream 277979 20461791 ~ 20504276 (+)
c1ql3b LOC108241646,LOC102783794,LOC101484294,LOC102201850,LOC103369334 coding upstream 373222 20407668 ~ 20409033 (+)
pth1r pth1r coding downstream 142936 20935435 ~ 20983609 (+)
LOC120567629 NA coding downstream 224403 21016902 ~ 21019325 (+)
gjc2 gjc2 coding downstream 234001 21026500 ~ 21045564 (+)
iba57 iba57 coding downstream 255855 21048354 ~ 21051342 (+)
snap47 snap47 coding downstream 260882 21053381 ~ 21059750 (+)
G116465 NA non-coding upstream 83046 20696904 ~ 20699209 (+)
G116464 NA non-coding upstream 85782 20693420 ~ 20696473 (+)
G116463 NA non-coding upstream 89114 20692887 ~ 20693141 (+)
G116461 NA non-coding upstream 90270 20691619 ~ 20691985 (+)
LOC120567944 NA non-coding upstream 128105 20648605 ~ 20654150 (+)
G116507 NA non-coding downstream 35377 20827876 ~ 20828235 (+)
G116514 NA non-coding downstream 88193 20880692 ~ 20880996 (+)
G116529 NA non-coding downstream 156505 20949004 ~ 21028982 (+)
G116538 NA non-coding downstream 229132 21021631 ~ 21030496 (+)
G116583 wnt9a non-coding downstream 337109 21129608 ~ 21134012 (+)
LOC120567833 gbg5 other upstream 406622 20373227 ~ 20375633 (+)
emilin2a NA other upstream 1316874 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 1730013 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 2056808 18720365 ~ 18725447 (+)
LOC120568691 NA other upstream 2108115 18660429 ~ 18674140 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other downstream 90118 20882617 ~ 20915322 (+)
LOC120568354 NA other downstream 1078454 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 1815550 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 1849011 22641510 ~ 22681293 (+)
kdsr kdsr,LOC102792240 other downstream 2641126 23433625 ~ 23440843 (+)

Expression


Co-expression Network