gpt (LOC102200225,LOC103359759,LOC101485501,LOC100690242,LOC102299610,LOC102784352)


Basic Information

Item Value
gene id gpt
gene name LOC102200225,LOC103359759,LOC101485501,LOC100690242,LOC102299610,LOC102784352
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 20376975 ~ 20396218 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814895.1
CCTGCGCTCGCTGCCTGTGGTGTTGCCATGTGTGCAGGGAGCGATCATACCCAAATCTTTTCAGAGTCGAACGCGTAGCCAGTGTGCGTCGGTGGATGCAGCCGGGTCTTTTAGAAACTTTAATTAATTTGGTCTAAGCCGCACTTGTACTGTGACTTATGAACGGTCCAAAGGTCTAAAGGCTTAACATTTTAAGCAGCGCGGAGACGCCGCATGCACAACTTTGATTTCCCTCCTTTCGAGTGAAGCATCCGCCGTGGTGCAAGTCGCTGTGCACCGCAGAGGCTTTAAAAGCTACCCAACTTTGTTGAAAGAAGGCCGTTGTAACATGTCGGCCACACGGTTGCAGTTGCTGTCACACCGAAACGTCCCGCTTTTAAGCCGGGGGCCAAACGAATTGTTAGCCGGTGGTGGTCCCAGAGTCCGAAAACTCACATCTCCAACTCTGTCGTCATCCTCTCCCGGCAGAGCTTTATCGAGTCTGAGCGCGACTCGGCGTGGGCTCCCCAAAGAGAAGATGTCCGAGAATGGAGTGCTGTCCCGGGCCAAGGTGTTGACCATCGACACCATGAACCCCACGGTGAAGAAGGTGGAGTACGCCGTGCGCGGGCCCATCGTGCTGCGGGCTGTGGAGCTGGAGAGGGAGCTTTCTGAGGGAATGAAGAAGCCCTTTTCGGAGGTCATCAAGGCCAACATTGGTGACGCTCATGCTATGGGCCAGCAGCCAATCACTTTCTTCCGACAGGTCTTGGCGCTGTGCTCCTACCCCGAACTGCTGAATGACAGCACATTCCCAGAGGATGCTAAAAGTAGAGCACGCCGCATTCTGCAGTCCTGTGGAGGGAACAGTATGGGTTCCTACACGGCCAGTCAGGGCATAGACTCTGTGCGTCAGGATGTGGCCTGCTACATTGAGCGAAGAGATGGCGGTGTGCCCTGCGACCCAGACGACATTTATCTCACCACAGGAGCCAGCGACGGCATTGTGACCATTCTGAAGCTGCTGGTGTGTGGCGAGGGTGCGACCCGTACAGGCGTCATGATCTCCATACCTCAGTATCCCCTGTACTCTGCTGCGTTGGCTGAATTGGGCGCCGTGCAGATCAACTATTACCTTAATGAGGAGAAGTGCTGGAGTATGGACATCAGCGAGCTGCAGCGCGCCCTGGATGAAGCCCGGCGCCACTGCAACCCCCGAGCGCTGTGCGTCATCAACCCTGGAAACCCCACCGGTCAGGTTCAGAGCAGACAGTGCATTGAGGACGTAATCCGATTTGCAGCAAATGAACGTCTCCTCCTCATGGCTGATGAGGTGTACCAGGACAATGTGTATGCTGAAGGTTGCCAGTTCCACTCTTTTAAGAAGGTTCTGTTTGAAATGGGGCCAGAGTACTCTGATACAGTGGAACTGGTATCTTTCCACTCCACCTCCAAATGTTACATGGGAGAgtGTGGCTTCCGTGGAGGCTACATGGAGATCATCAACATGGACGATGAGGTGAAGGCCCAGCTGACCAAGCttgtgtctgtccgtctgtgtcCTCCTGTCCCTGGACAGGCTCTAATGGACCTGGTGGTCAACCCCCCTCAGCCTGGGGAACCCTCGCACGACAACTTTATCAAGGAGCGCACAGTCACCTTAAGTGCCTTAGCAGAGAAGGCCAAGCTCACAGAGCAGGTTCTGAATACTATTCAAGGCATCAGCTGTAATCCTGTTCAGGGCGCTATGTACTCCTTCCCTCGTATAACCATCCCTGAAAAGGCCATCCAAGAGGCCATGGATAAAGGTCAGGAGCCAGATATGTTTTACTGCATGAAGATGCTGGAGGAGACGGGGATCTGCCTCGTACCTGGAAGTGGCTTTGGTCAGACAGATGGAACCTACCACTTCAGAATGACTATCTTGCCACCGACAGACAAGCTGACGATCCTGCTGAACAAAGTCAAGGAGTTCCACCAGAAATTCACACAGCAGTATTCTTAAATTGCCCAATCTCTTCCTCTTATTACCAAGGGAGGAACCCGCCAACCACAACAAAAAGAACTCTGCCAATCAGAATTCATCTGTCACTAATAAGTGCCTTTTCTACCTACGGCGGCTCTGGTGGTCTCTGTGATGATGCACTTCAGCCTCTACAGCTATCTCATTTGGACATTCGCAGATGGTACACAAGGCACTGTTTTGTGTtagcaaacaaaagaaaactggAAATGAAGAGATTAATTCAGAGGTGTGTGGGAAGCTTGGTATGAAAATATGGTTTTAACTTTGAAGAATATATGTAGTAGGTCTGTGTATTTGTGACTATGACAGATAGATTGTCTATGTGAATACCAAGATGAAATAAAAAGGTACAATTGAAGAAAAAGGTGATGAAGCTTTAAATCTTTTAGAATGTGTACAACTGGTTAAAATATTGCATTCCTGCAGGCAGTACTTGACTGGGAGAACATGCAGAAAAGTCCCTATTTGCATAACGATTCAGAAAGGATTTTggagaatgaaaataaatgtaaccTTCAA
>XM_039814896.1
TGAACTCCGGGGGCTGAACCTATGGGCTGAACCCAGGTCGGTCTTCTCGTCCCGCTCCTTCAGCGGTTACACCACAGCTCGTAAATCATAACTGCAGCTCGACCAGCCGAATGAAACCGTCCTCTCCTCACCATTGTGAAGAATGAATTATGGGACAACGTTACTGTGGAAACGACGAGCTTTATCGAGTCTGAGCGCGACTCGGCGTGGGCTCCCCAAAGAGAAGATGTCCGAGAATGGAGTGCTGTCCCGGGCCAAGGTGTTGACCATCGACACCATGAACCCCACGGTGAAGAAGGTGGAGTACGCCGTGCGCGGGCCCATCGTGCTGCGGGCTGTGGAGCTGGAGAGGGAGCTTTCTGAGGGAATGAAGAAGCCCTTTTCGGAGGTCATCAAGGCCAACATTGGTGACGCTCATGCTATGGGCCAGCAGCCAATCACTTTCTTCCGACAGGTCTTGGCGCTGTGCTCCTACCCCGAACTGCTGAATGACAGCACATTCCCAGAGGATGCTAAAAGTAGAGCACGCCGCATTCTGCAGTCCTGTGGAGGGAACAGTATGGGTTCCTACACGGCCAGTCAGGGCATAGACTCTGTGCGTCAGGATGTGGCCTGCTACATTGAGCGAAGAGATGGCGGTGTGCCCTGCGACCCAGACGACATTTATCTCACCACAGGAGCCAGCGACGGCATTGTGACCATTCTGAAGCTGCTGGTGTGTGGCGAGGGTGCGACCCGTACAGGCGTCATGATCTCCATACCTCAGTATCCCCTGTACTCTGCTGCGTTGGCTGAATTGGGCGCCGTGCAGATCAACTATTACCTTAATGAGGAGAAGTGCTGGAGTATGGACATCAGCGAGCTGCAGCGCGCCCTGGATGAAGCCCGGCGCCACTGCAACCCCCGAGCGCTGTGCGTCATCAACCCTGGAAACCCCACCGGTCAGGTTCAGAGCAGACAGTGCATTGAGGACGTAATCCGATTTGCAGCAAATGAACGTCTCCTCCTCATGGCTGATGAGGTGTACCAGGACAATGTGTATGCTGAAGGTTGCCAGTTCCACTCTTTTAAGAAGGTTCTGTTTGAAATGGGGCCAGAGTACTCTGATACAGTGGAACTGGTATCTTTCCACTCCACCTCCAAATGTTACATGGGAGAgtGTGGCTTCCGTGGAGGCTACATGGAGATCATCAACATGGACGATGAGGTGAAGGCCCAGCTGACCAAGCttgtgtctgtccgtctgtgtcCTCCTGTCCCTGGACAGGCTCTAATGGACCTGGTGGTCAACCCCCCTCAGCCTGGGGAACCCTCGCACGACAACTTTATCAAGGAGCGCACAGTCACCTTAAGTGCCTTAGCAGAGAAGGCCAAGCTCACAGAGCAGGTTCTGAATACTATTCAAGGCATCAGCTGTAATCCTGTTCAGGGCGCTATGTACTCCTTCCCTCGTATAACCATCCCTGAAAAGGCCATCCAAGAGGCCATGGATAAAGGTCAGGAGCCAGATATGTTTTACTGCATGAAGATGCTGGAGGAGACGGGGATCTGCCTCGTACCTGGAAGTGGCTTTGGTCAGACAGATGGAACCTACCACTTCAGAATGACTATCTTGCCACCGACAGACAAGCTGACGATCCTGCTGAACAAAGTCAAGGAGTTCCACCAGAAATTCACACAGCAGTATTCTTAAATTGCCCAATCTCTTCCTCTTATTACCAAGGGAGGAACCCGCCAA
>XM_039814897.1
ACAAAAAAAAGTGAGGTGCAGGGAGCTCAAGACAAAGTTGGAAGCTGCACCCAGTTCGCTGATATCCCTCTAAACCACGTCTGCAGTCCAAAGCTGTTTCAGCTCGGTAACCGGAGAACCGACCCTGATTGACAGCCGTACGAGCTTTATCGAGTCTGAGCGCGACTCGGCGTGGGCTCCCCAAAGAGAAGATGTCCGAGAATGGAGTGCTGTCCCGGGCCAAGGTGTTGACCATCGACACCATGAACCCCACGGTGAAGAAGGTGGAGTACGCCGTGCGCGGGCCCATCGTGCTGCGGGCTGTGGAGCTGGAGAGGGAGCTTTCTGAGGGAATGAAGAAGCCCTTTTCGGAGGTCATCAAGGCCAACATTGGTGACGCTCATGCTATGGGCCAGCAGCCAATCACTTTCTTCCGACAGGTCTTGGCGCTGTGCTCCTACCCCGAACTGCTGAATGACAGCACATTCCCAGAGGATGCTAAAAGTAGAGCACGCCGCATTCTGCAGTCCTGTGGAGGGAACAGTATGGGTTCCTACACGGCCAGTCAGGGCATAGACTCTGTGCGTCAGGATGTGGCCTGCTACATTGAGCGAAGAGATGGCGGTGTGCCCTGCGACCCAGACGACATTTATCTCACCACAGGAGCCAGCGACGGCATTGTGACCATTCTGAAGCTGCTGGTGTGTGGCGAGGGTGCGACCCGTACAGGCGTCATGATCTCCATACCTCAGTATCCCCTGTACTCTGCTGCGTTGGCTGAATTGGGCGCCGTGCAGATCAACTATTACCTTAATGAGGAGAAGTGCTGGAGTATGGACATCAGCGAGCTGCAGCGCGCCCTGGATGAAGCCCGGCGCCACTGCAACCCCCGAGCGCTGTGCGTCATCAACCCTGGAAACCCCACCGGTCAGGTTCAGAGCAGACAGTGCATTGAGGACGTAATCCGATTTGCAGCAAATGAACGTCTCCTCCTCATGGCTGATGAGGTGTACCAGGACAATGTGTATGCTGAAGGTTGCCAGTTCCACTCTTTTAAGAAGGTTCTGTTTGAAATGGGGCCAGAGTACTCTGATACAGTGGAACTGGTATCTTTCCACTCCACCTCCAAATGTTACATGGGAGAgtGTGGCTTCCGTGGAGGCTACATGGAGATCATCAACATGGACGATGAGGTGAAGGCCCAGCTGACCAAGCttgtgtctgtccgtctgtgtcCTCCTGTCCCTGGACAGGCTCTAATGGACCTGGTGGTCAACCCCCCTCAGCCTGGGGAACCCTCGCACGACAACTTTATCAAGGAGCGCACAGTCACCTTAAGTGCCTTAGCAGAGAAGGCCAAGCTCACAGAGCAGGTTCTGAATACTATTCAAGGCATCAGCTGTAATCCTGTTCAGGGCGCTATGTACTCCTTCCCTCGTATAACCATCCCTGAAAAGGCCATCCAAGAGGCCATGGATAAAGGTCAGGAGCCAGATATGTTTTACTGCATGAAGATGCTGGAGGAGACGGGGATCTGCCTCGTACCTGGAAGTGGCTTTGGTCAGACAGATGGAACCTACCACTTCAGAATGACTATCTTGCCACCGACAGACAAGCTGACGATCCTGCTGAACAAAGTCAAGGAGTTCCACCAGAAATTCACACAGCAGTATTCTTAAATTGCCCAATCTCTTCCTCTTATTACCAAGGGAGGAACCCGCCAA
>XM_039814899.1
CTCCGGGGGCTGAACCTATGGGCTGAACCCAGGTCGGTCTTCTCGTCCCGCTCCTTCAGCGGTTACACCACAGCTCGTAAATCATAACTGCAGCTCGACCAGCCGAATGAAACCGTCCTCTCCTCACCATTGTGAAGAATGAATTATGGGACAACGTTACTGTGGAAACGACGGGAATGAAGAAGCCCTTTTCGGAGGTCATCAAGGCCAACATTGGTGACGCTCATGCTATGGGCCAGCAGCCAATCACTTTCTTCCGACAGGTCTTGGCGCTGTGCTCCTACCCCGAACTGCTGAATGACAGCACATTCCCAGAGGATGCTAAAAGTAGAGCACGCCGCATTCTGCAGTCCTGTGGAGGGAACAGTATGGGTTCCTACACGGCCAGTCAGGGCATAGACTCTGTGCGTCAGGATGTGGCCTGCTACATTGAGCGAAGAGATGGCGGTGTGCCCTGCGACCCAGACGACATTTATCTCACCACAGGAGCCAGCGACGGCATTGTGACCATTCTGAAGCTGCTGGTGTGTGGCGAGGGTGCGACCCGTACAGGCGTCATGATCTCCATACCTCAGTATCCCCTGTACTCTGCTGCGTTGGCTGAATTGGGCGCCGTGCAGATCAACTATTACCTTAATGAGGAGAAGTGCTGGAGTATGGACATCAGCGAGCTGCAGCGCGCCCTGGATGAAGCCCGGCGCCACTGCAACCCCCGAGCGCTGTGCGTCATCAACCCTGGAAACCCCACCGGTCAGGTTCAGAGCAGACAGTGCATTGAGGACGTAATCCGATTTGCAGCAAATGAACGTCTCCTCCTCATGGCTGATGAGGTGTACCAGGACAATGTGTATGCTGAAGGTTGCCAGTTCCACTCTTTTAAGAAGGTTCTGTTTGAAATGGGGCCAGAGTACTCTGATACAGTGGAACTGGTATCTTTCCACTCCACCTCCAAATGTTACATGGGAGAgtGTGGCTTCCGTGGAGGCTACATGGAGATCATCAACATGGACGATGAGGTGAAGGCCCAGCTGACCAAGCttgtgtctgtccgtctgtgtcCTCCTGTCCCTGGACAGGCTCTAATGGACCTGGTGGTCAACCCCCCTCAGCCTGGGGAACCCTCGCACGACAACTTTATCAAGGAGCGCACAGTCACCTTAAGTGCCTTAGCAGAGAAGGCCAAGCTCACAGAGCAGGTTCTGAATACTATTCAAGGCATCAGCTGTAATCCTGTTCAGGGCGCTATGTACTCCTTCCCTCGTATAACCATCCCTGAAAAGGCCATCCAAGAGGCCATGGATAAAGGTCAGGAGCCAGATATGTTTTACTGCATGAAGATGCTGGAGGAGACGGGGATCTGCCTCGTACCTGGAAGTGGCTTTGGTCAGACAGATGGAACCTACCACTTCAGAATGACTATCTTGCCACCGACAGACAAGCTGACGATCCTGCTGAACAAAGTCAAGGAGTTCCACCAGAAATTCACACAGCAGTATTCTTAAATTGCCCAATCTCTTCCTCTTATTACCAAGGGAGGAACCCGCCAA

Function

NR:

description
PREDICTED: alanine aminotransferase 2-like isoform X1

GO:

id name namespace
GO:0009058 biosynthetic process biological_process
GO:0030170 pyridoxal phosphate binding molecular_function
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K00814 GPT, ALT; alanine transaminase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814895.1 True 2524 mRNA 0.50 11 20382502 20396218
XM_039814896.1 False 1738 mRNA 0.54 12 20376975 20395723
XM_039814897.1 False 1703 mRNA 0.54 12 20382279 20395723
XM_039814899.1 False 1547 mRNA 0.53 11 20376979 20395723

Neighbor

gene id symbol gene type direction distance location
ssx2ipa ssx2ip,LOC103359758 coding upstream 3830 20366760 ~ 20373145 (+)
mcoln3a LOC104953893 coding upstream 10443 20360283 ~ 20366532 (+)
bcl10 bcl10,LOC102797731 coding upstream 17875 20357116 ~ 20359100 (+)
LOC120568873 NA coding upstream 29491 20339503 ~ 20347484 (+)
LOC120568950 atp5l,LOC108233819 coding upstream 40851 20334361 ~ 20336124 (+)
c1ql3b LOC108241646,LOC102783794,LOC101484294,LOC102201850,LOC103369334 coding downstream 11450 20407668 ~ 20409033 (+)
egfra LOC103369338 coding downstream 65573 20461791 ~ 20504276 (+)
npc1 npc1 coding downstream 111192 20507410 ~ 20523539 (+)
abhd3 abhd3 coding downstream 281139 20677357 ~ 20689630 (+)
rock1 rock1 coding downstream 345043 20741261 ~ 20779745 (+)
G116327 NA non-coding upstream 54434 20322288 ~ 20322541 (+)
G116322 NA non-coding upstream 61704 20314888 ~ 20315271 (+)
LOC120567788 NA non-coding upstream 173237 20202125 ~ 20203738 (+)
G116216 NA non-coding upstream 474156 19902243 ~ 19902819 (+)
G116215 NA non-coding upstream 491276 19884595 ~ 19885699 (+)
LOC120567944 NA non-coding downstream 252387 20648605 ~ 20654150 (+)
G116461 NA non-coding downstream 295401 20691619 ~ 20691985 (+)
G116463 NA non-coding downstream 296669 20692887 ~ 20693141 (+)
G116464 NA non-coding downstream 297202 20693420 ~ 20696473 (+)
G116465 NA non-coding downstream 300686 20696904 ~ 20699209 (+)
LOC120567833 gbg5 other upstream 1342 20373227 ~ 20375633 (+)
emilin2a NA other upstream 911594 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 1324733 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 1651528 18720365 ~ 18725447 (+)
LOC120568691 NA other upstream 1702835 18660429 ~ 18674140 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other downstream 486399 20882617 ~ 20915322 (+)
LOC120568354 NA other downstream 1474735 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 2211831 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 2245292 22641510 ~ 22681293 (+)
kdsr kdsr,LOC102792240 other downstream 3037407 23433625 ~ 23440843 (+)

Expression


Co-expression Network