LOC120567835 (LOC106949703,LOC103156008,LOC107087008)


Basic Information

Item Value
gene id LOC120567835
gene name LOC106949703,LOC103156008,LOC107087008
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 4487328 ~ 4499789 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814905.1
cagtgtggcccttagagaagttgagtttgacacccctgacctAGACTCATCACATTGGCAGAAATGGGCCTCCATACTCATGTCAAACGGGAATATCTTTTAGAATGGAGAATGATAGGCTACTACCATTGGCTACTACTAGGCTACTTTGCACATGCGCATTCTGGGTTGTCTCTGGGAGTTTTTTTCTACCCCTGCATCACTTCCTGGTTTGTCTcgggtctgtttacatcaggTGGGAATCTACATTCAGGCAAACGCTGCGGGCGCGTGCGTTTCTGTCGCTCTATCACGAGCCCCCTGTCATCTGGACGGTTCTGTTTTCTACACACGCACGCGGGGGGTTAACATGTCTCCGGCCGCTGGCATCCACGCGCAACTCGCCTCCATCATGGAGGTGCTGGCCAACACGGCGGTGGCGGAGATCTGCGAGCTCGTGGACAGCGGCTACTCGGTGCTGCAGCTCGAGATCTCGCGGAGCCGCAAAGAGAACGAGGTCCTGCGGAGAAAGCTGCGGCTCATGGAGCTCCGGGCCGCACGTTCGAGCGCCCTGCGCGCCGCCGCCAACGGCTCGGCgctgctgctagctaacggCCGCGCTCGAGCTCCGCTGCCTGCTCATCACCTGGGAAACGGGCCAAGGCGGAGCGGGACGCCTGGAGGTGAGGCAGCGCGGCCCAGAGGAGACCCCGAACCTCCGTCAACAGACCCTGGACTAGATCCCACCCAGGGGCCGCGTGCCGCGGCTGCGGGGGAGTCGGCCACGCTGACTGTCGCCGTGATCAAAGTGGAGGACGACCACGAGTCCTGGTCCCGGTCCCAGCAGGACAAAGACTTTTGTTGCGTTGTTGACGGACAGACGGCCGAGACAGAAGCCCCGCCCCCGCAGACCAAACAGGAAGTAGCAGAGGAAGACCGAGGCGCTCAATCTCAGCCGTGGGTGAGCGTGGGGGACGTCCAGGAAACCCCGAGCTCCAGCCAAGGCTCAGAAACCAGCGCTTACGACTGTCTGATGTACGAGCCGCAGCTCCAGCACGGCTCCCTCGCTACCCAGAATCCTTTGCGAGAGGATCCCGGCTGCTCGTACGCGCTGAACGCCACCGCGAGTGCTTCCGCTGCGACCGATTTAGGCGCCGGCAGCTTCCCTTTCCCCGTCAGTGAGCAGGCTGCAGGTCTCCACAACAGCCAGCAGAGGGCGCCGCCTCCACCGCCGCTTGCAGACTCGCCGCAGCTTCCCGCGAGGAAAGACACGGGGGGAAGACTCGCCGCTTTCACCAGAAGGGACAAATGGCGGCCGCGGGACGCCGTCGGTCACGGCAGCGGGGAGGACGCCGCCGCCGGCAAGTCGTTCGTCTGCAACTTCTGCGGGAAAAGTCTGGCGTGCCTGAAGAACCTGAAGACCCACATGAGGGTCCACACGGGCGAGAAGCCGTTCGTCTGCGCGCTGTGCGGCAAGCGCTTCTCCGACTCCAGCAACCTGAAGCGCCACCAGAGCGTGCACACGGGGGAGAAGCGCTACGGCTGCGTGCACTGCGGCAAGCGCTTCGCCCAGTCGGGCTCGCTGAAGGTGCACATGACCGTCCACACGGACTGCAAACAGTTCAGGTGTTCCTTCTGCGGGAAAACCTTCATCTCGGGAAGCCACCTGCGGCGCCACGTCACCGTGCACGCCGGCGAGAAACGGCTCGCTCCGACGATCCAGTGAGCGACAAATCTTACAGGAGACACACAGCGCTCAGCGTAAGTTtacaactttagcatgggtgtatgcTAAAGAGGAACAAAAGAATCATCTtctggaaattgatcttaaaaggtgccctgccacacgtgtTTCATGACTTTatggtgatgtctgaaggtctactgtggac
>XM_039814906.1
ccagtgtggcccttagagaagttgagtttgacacccctgacctAGACTCATCACATTGGCAGAAATGGGCCTCCATACTCATGTCAAACGGGAATATCTTTTAGAATGGAGAATGATAGGCTACTACCATTGGCTACTACTAGGCTACTTTGCACATGCGCATTCTGGGTTGTCTCTGGGAGTTTTTTTCTACCCCTGCATCACTTCCTGGTTTGTCTcgggtctgtttacatcaggTGGGAATCTACATTCAGGCAAACGCTGCGGGCGCGTGCGTTTCTGTCGCTCTATCACGAGCCCCCTGTCATCTGGACGGTTCTGTTTTCTACACACGCACGCGGGGGGTTAACATGTCTCCGGCCGCTGGCATCCACGCGCAACTCGCCTCCATCATGGAGGTGCTGGCCAACACGGCGGTGGCGGAGATCTGCGAGCTCGTGGACAGCGGCTACTCGGTGCTGCAGCTCGAGATCTCGCGGAGCCGCAAAGAGAACGAGGTCCTGCGGAGAAAGCTGCGGCTCATGGAGCTCCGGGCCGCACGTTCGAGCGCCCTGCGCGCCGCCGCCAACGGCTCGGCgctgctgctagctaacggCCGCGCTCGAGCTCCGCTGCCTGCTCATCACCTGGGAAACGGGCCAAGGCGGAGCGGGACGCCTGGAGGTGAGGCAGCGCGGCCCAGAGGAGACCCCGAACCTCCGTCAACAGACCCTGGACTAGATCCCACCCAGGGGCCGCGTGCCGCGGCTGCGGGGGAGTCGGCCACGCTGACTGTCGCCGTGATCAAAGTGGAGGACGACCACGAGTCCTGGTCCCGGTCCCAGCAGGACAAAGACTTTTGTTGCGTTGTTGACGGACAGACGGCCGAGACAGAAGCCCCGCCCCCGCAGACCAAACAGGAAGTAGCAGAGGAAGACCGAGGCGCTCAATCTCAGCCGTGGGTGAGCGTGGGGGACGTCCAGGAAACCCCGAGCTCCAGCCAAGGCTCAGAAACCAGCGCTTACGACTGTCTGATGTACGAGCCGCAGCTCCAGCACGGCTCCCTCGCTACCCAGAATCCTTTGCGAGAGGATCCCGGCTGCTCGTACGCGCTGAACGCCACCGCGAGTGCTTCCGCTGCGACCGATTTAGGCGCCGGCAGCTTCCCTTTCCCCGTCAGTGAGGCTGCAGGTCTCCACAACAGCCAGCAGAGGGCGCCGCCTCCACCGCCGCTTGCAGACTCGCCGCAGCTTCCCGCGAGGAAAGACACGGGGGGAAGACTCGCCGCTTTCACCAGAAGGGACAAATGGCGGCCGCGGGACGCCGTCGGTCACGGCAGCGGGGAGGACGCCGCCGCCGGCAAGTCGTTCGTCTGCAACTTCTGCGGGAAAAGTCTGGCGTGCCTGAAGAACCTGAAGACCCACATGAGGGTCCACACGGGCGAGAAGCCGTTCGTCTGCGCGCTGTGCGGCAAGCGCTTCTCCGACTCCAGCAACCTGAAGCGCCACCAGAGCGTGCACACGGGGGAGAAGCGCTACGGCTGCGTGCACTGCGGCAAGCGCTTCGCCCAGTCGGGCTCGCTGAAGGTGCACATGACCGTCCACACGGACTGCAAACAGTTCAGGTGTTCCTTCTGCGGGAAAACCTTCATCTCGGGAAGCCACCTGCGGCGCCACGTCACCGTGCACGCCGGCGAGAAACGGCTCGCTCCGACGATCCAGTGAGCGACAAATCTTACAGGAGACACACAGCGCTCAGCGTAAGTTtacaactttagcatgggtgtatgcTAAAGAGGAACAAAAGAATCATCTtctggaaattgatcttaaaaggtgccctgccacacgtgtTTCATGACTTTatggtgatgtctgaaggtctactgtggac
>XM_039814907.1
ccagtgtggcccttagagaagttgagtttgacacccctgacctAGACTCATCACATTGGCAGAAATGGGCCTCCATACTCATGTCAAACGGGAATATCTTTTAGAATGGAGAATGATAGGCTACTACCATTGGCTACTACTAGGCTACTTTGCACATGCGCATTCTGGGTTGTCTCTGGGAGTTTTTTTCTACCCCTGCATCACTTCCTGGTTTGTCTcgggtctgtttacatcaggTGGGAATCTACATTCAGGCAAACGCTGCGGGCGCGTGCGTTTCTGTCGCTCTATCACGAGCCCCCTGTCATCTGGACGGTTCTGTTTTCTACACACGCACGCGGGGGGTTAACATGTCTCCGGCCGCTGGCATCCACGCGCAACTCGCCTCCATCATGGAGGTGCTGGCCAACACGGCGGTGGCGGAGATCTGCGAGCTCGTGGACAGCGGCTACTCGGTGCTGCAGCTCGAGATCTCGCGGAGCCGCAAAGAGAACGAGGTCCTGCGGAGAAAGCTGCGGCTCATGGAGCTCCGGGCCGCACGTTCGAGCGCCCTGCGCGCCGCCGCCAACGGCTCGGCgctgctgctagctaacggCCGCGCTCGAGCTCCGCTGCCTGCTCATCACCTGGGAAACGGGCCAAGGCGGAGCGGGACGCCTGGAGGTGAGGCAGCGCGGCCCAGAGGAGACCCCGAACCTCCGTCAACAGACCCTGGACTAGATCCCACCCAGGGGCCGCGTGCCGCGGCTGCGGGGGAGTCGGCCACGCTGACTGTCGCCGTGATCAAAGTGGAGGACGACCACGAGTCCTGGTCCCGGTCCCAGCAGGACAACTTTTGTTGCGTTGTTGACGGACAGACGGCCGAGACAGAAGCCCCGCCCCCGCAGACCAAACAGGAAGTAGCAGAGGAAGACCGAGGCGCTCAATCTCAGCCGTGGGTGAGCGTGGGGGACGTCCAGGAAACCCCGAGCTCCAGCCAAGGCTCAGAAACCAGCGCTTACGACTGTCTGATGTACGAGCCGCAGCTCCAGCACGGCTCCCTCGCTACCCAGAATCCTTTGCGAGAGGATCCCGGCTGCTCGTACGCGCTGAACGCCACCGCGAGTGCTTCCGCTGCGACCGATTTAGGCGCCGGCAGCTTCCCTTTCCCCGTCAGTGAGCAGGCTGCAGGTCTCCACAACAGCCAGCAGAGGGCGCCGCCTCCACCGCCGCTTGCAGACTCGCCGCAGCTTCCCGCGAGGAAAGACACGGGGGGAAGACTCGCCGCTTTCACCAGAAGGGACAAATGGCGGCCGCGGGACGCCGTCGGTCACGGCAGCGGGGAGGACGCCGCCGCCGGCAAGTCGTTCGTCTGCAACTTCTGCGGGAAAAGTCTGGCGTGCCTGAAGAACCTGAAGACCCACATGAGGGTCCACACGGGCGAGAAGCCGTTCGTCTGCGCGCTGTGCGGCAAGCGCTTCTCCGACTCCAGCAACCTGAAGCGCCACCAGAGCGTGCACACGGGGGAGAAGCGCTACGGCTGCGTGCACTGCGGCAAGCGCTTCGCCCAGTCGGGCTCGCTGAAGGTGCACATGACCGTCCACACGGACTGCAAACAGTTCAGGTGTTCCTTCTGCGGGAAAACCTTCATCTCGGGAAGCCACCTGCGGCGCCACGTCACCGTGCACGCCGGCGAGAAACGGCTCGCTCCGACGATCCAGTGAGCGACAAATCTTACAGGAGACACACAGCGCTCAGCGTAAGTTtacaactttagcatgggtgtatgcTAAAGAGGAACAAAAGAATCATCTtctggaaattgatcttaaaaggtgccctgccacacgtgtTTCATGACTTTatggtgatgtctgaaggtctactgtggac

Function

NR:

description
PREDICTED: zinc finger and BTB domain-containing protein 17-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814905.1 True 1874 mRNA 0.61 5 4487328 4499788
XM_039814906.1 False 1872 mRNA 0.61 5 4487328 4499789
XM_039814907.1 False 1872 mRNA 0.61 5 4487328 4499789

Neighbor

gene id symbol gene type direction distance location
slc39a6 slc39a6 coding downstream 318672 4145863 ~ 4168656 (-)
si:ch73-170d6.2 NA coding downstream 365977 4110746 ~ 4121351 (-)
cldn15la LOC104937175,LOC107383743,LOC108229378 coding downstream 459742 4021167 ~ 4027586 (-)
saga LOC100700585,LOC102198835,LOC102289605,LOC101471160,LOC103367699,LOC102794384 coding downstream 469066 4001441 ~ 4018262 (-)
proca NA coding downstream 503333 3972332 ~ 3983995 (-)
LOC120567837 NA coding upstream 5933 4505722 ~ 4510614 (-)
si:dkey-7l6.3 NA coding upstream 19572 4519361 ~ 4527181 (-)
efr3a efr3a coding upstream 395472 4895261 ~ 5063854 (-)
LOC120568537 NA coding upstream 608252 5108041 ~ 5148701 (-)
basp1 NA coding upstream 924202 5423991 ~ 5486661 (-)
G112069 NA non-coding downstream 6409 4429027 ~ 4480919 (-)
G112086 NA non-coding downstream 18305 4468357 ~ 4469023 (-)
LOC120568277 NA non-coding downstream 56974 4429827 ~ 4430354 (-)
G112061 NA non-coding downstream 77861 4392850 ~ 4409467 (-)
G112050 NA non-coding downstream 180605 4306203 ~ 4306723 (-)
G112095 NA non-coding upstream 1305 4501094 ~ 4608993 (-)
G112121 NA non-coding upstream 115249 4615038 ~ 4629833 (-)
G112122 NA non-coding upstream 134101 4633890 ~ 4665462 (-)
G112142 NA non-coding upstream 292543 4792332 ~ 4796397 (-)
G112162 NA non-coding upstream 304849 4804638 ~ 4804959 (-)
G112046 NA other downstream 203245 4267538 ~ 4284083 (-)
G112043 NA other downstream 248658 4238102 ~ 4238670 (-)
G111942 NA other downstream 450365 3504498 ~ 4036963 (-)
LOC120568325 NA other downstream 853929 3629565 ~ 3633399 (-)
LOC120568522 NA other downstream 901802 3564546 ~ 3585526 (-)
G112233 NA other upstream 1164215 5664004 ~ 5668687 (-)
LOC120568546 NA other upstream 1223944 5723733 ~ 5746081 (-)
G112328 NA other upstream 1293374 5793163 ~ 5852447 (-)
LOC120567959 NA other upstream 1672492 6172281 ~ 6178886 (-)
zmynd11 zmynd11 other upstream 2195821 6695610 ~ 6736512 (-)

Expression


Co-expression Network