sppl2 (sppl2b)


Basic Information

Item Value
gene id sppl2
gene name sppl2b
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18480670 ~ 18494488 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814932.1
GGGGGCTTGGGTGAGGGGCCGGAGAGCCGAACtcttggttggttggttggttgatgggggaaacaacaacaagctAGGCATCATGAGGGTCCCTGAAACACTGATTTGGACCGCTTTTCTCATCCAGAAGGTGGTGGGAGAGTATGGCATGGCTCATTTCAGTGACAAGGGCAAGAGCAATGGAAAGGATTACTGCATATTCTTTAACTCACAATGGGCACGTCTACCTCAGGACCTCAATAAAGCATCACGTCTTCAGATCTATGACCTGACAACATCGGTCCTGTGCTCGCCCTCCGACGTCCCGGAGGGAGGCTTCCCAAATCGCATCCCCATGGTGATGAGAGGCAACTGCACTTTCTATGAAAAGGTCCGACTGGCCCAGATTAACGGCGCCAAGGGCCTTCTCATCGTCAGCAAGGACAGACTGACACCACCAGCAGGAAACAAGACTCAGTATGAGGAGATTGACATTCCTGTAGCACTGCTCAGCTACTCTGATATGCTGGACATAGGCAAGACCTTTGGTAAAGGAAGACTGGTCGCCATGTACGCACCCAATGAGCCAGTGTTGGACTACAACATGGTGATCATCTTTTTGATGGCAGTAGGAACTGTTGCCATTGGAGGTTACTGGGCTGGCAGCAGAGACAGCAAGAAACGCTACATGAAGCACAAGCGGGACGACGGTGCGGAGAAGCAGGACGAGGAGACCGTAGACGTCACCCCCATCATGACCTGTGTGTTCGTGGTCATGTGCTGCAGCATGCTGGTGCTACTCTACTTCTTCTATGATAGTCTGGCCATTTGGGTCATAGCCATCTTCTGTGTGGCCTCCTCTGTCGGCCTCTACAGCTGTCTCTGGCCGTTTGTCAGGAGACTCCCTTTCTGCAAGTGGAGGGTCCCAGAGAACAACTTGCCATACCTGCACAAACGGCCGCAGATCCGCATGTTGCTGCTGTCGGCCCTCTGCATTGGTGTCAGCATCACCTGGATGGTGTTTCGCAATGAAGACCAGTGGGCGTGGGTGTTACAGGACGCCCTGGGGATCGCCTTCTGTCTCTACATGCTCAAAACAGTCAGACTCCCCACATTTAAGGCTTGCACCTTATTACTGTCGGTCCTTTTTGTCTATGatgttttctttgtatttattaCACCCTTCTTTACAAAGAGTGGGGAAAGTATAATGGTGGAGGTAGCGGCTGGTCCCTCTGACTCCTCCATGCATGAAAAGCTTCCAATGGTGCTCAAAGTGCCAAGGTTaaactcctctcctctggcTCTTTGTGACCGGCCCTTCTCTCTCCTGGGCTTTGGTGATATCTTAGTACCAGGTCTGCTGGTGGCGTACTGTCACAGGTTTGACATTTTAACACAATCCTCCAGGATCTACTTTGTGGCCTGTACGATCGCTTACGGCATCGGCCTGCTGATCACCTTCGTGGCCCTGGCCTTCATGCAGATGGGTCAGCCGGCCTTGCTCTACCTGGTGCCTTGCACTCTGCTCACCAGTCTCACTGTAGCACTGTGGCGCAGGGAGTTGCCCCAGTTCTGGACTGGAAGTGGATTTGTGCCTCCCATAGTGCTATCACCAATCAACTGTACACAAACTGCAGCGCCGCAGACAGAGGATCACTTGACTAAACCGGAGCCGCAAACCACAGAAGAAGACTCACCCCACTTCCCGCCTCAGGAAACGCCCCCAGCtgagaaagatggagaggaaAACAAATCAAACTGAAAGGACGTCTAGTACggcatttttacatttcacttCATGTTTTACTTGttgagtttttctttttctacattGTTTCTCAGTCAATGGACATTTTCAGTATGGATGTTTATTTGCACTTGGTGTGAgtggaagagcagaggagatctTTGCTTCCTGAATGGCTGGCTCAGTGGGGCGCCAGGATTGGACACACAAGATTGAGGCATTGAAACTGACAAACACACCAAGTATTTAAACCTGCACAGCAGCCCCAACACCTTCTTCTATTATCGGTCTGTACCACCTCTAAAGGGAACAAAAAGCCAAATCTGGAAGCTACCCAAGCTGTTGAACACTAAATACTCCCACAACACTAAGCTGAGGCCCTTAACAGCTTTAAAGGCCCAGTCACACCGGTGTTTAAAACCGCAAAATATCAATTAACTTCAATGGAATCACTGCGATTAGGGGATTTGTTCACAGGGGCGAGGTAAATCCacgctatttatttttttacactatACTTTGGTGAGCCATCATGACTTAACTTGCTCCATCCAATCCACTTACAATTAACCTCCTCTGATGGAGTATAAAATGCTCCACAAAAGAGGGAGGGTTTGCAAACTGTTACATTGAGCAGCAGCTATTAGTCGTAGTCGATCAACAGAAAGTTAACCAGcatttattttgataatcaaataaTTGTTTTACCCATTTTTTTAGGCCAAATATGTGTAGGTTTCAGCTTCTCAATTATGAGAATGTAAAGCTTTTCGGTCTCGTACATGAAAATAAACTGagtatctttgggttttgaacTGTTGATCAGAAAAAACACGACAGACGTCAGCCAGgaactgcagatgaaaattagcctgtATGGCTAAATCTTGACACATTTCCACGTTGGACTCAGGTGCTCatgttaatgtgcattgtcccttaaataaagaaataaacaagcAAGCAATTATAACTGGCATCACCCAACTggcatcttctttttttttttttttttttttttttttttttttaaacaagaccAACAATTGGATTAATAGAGAATTTGATAACCCGCAGATTAATAAATAATGGAAACCCTACAGTTATGAGACAGGAGTCAGTGGTACAAATACGAATTTTGAATCAAATGCTTATTTCCCTCAATAGTTTTTTATCAAATGAAGTGGTGTACTATCCTAAGAACACAATGCCAGGGGGATTTAATGGCccaatatatatacaataaaaacaagctTAAGGATAAATTGCTTACTACTACTGTAGCTCACCAGCGGCAGTAGTTTACCAGCTAGCCCTGCAAGTAGTCACCAAGCCTCGAGGACCAAATATTTACCTGTGCTGCTTTCTGGTGTGACAGGGCCTTAAAAGGTCCCAGTATTCTTGAAAAGTTTTTCTCAAaagcacacaaatacacacacactacataacAAGCCAGTATAGCGGTCTTTATCCCTCCATTACATTATAAAGTACACCAGTGTCACAATGTAATGTACTGCAGTAATGGCAGAAgggtttctttaaaatgtagtgTTATGATTGTTGACTGAGCCaaaactattactttttatttattttttaactgaagCATTTGTTGATGTTTTCTCATCTTACGTTTGGTATATTTTGTTTTGCATGCTATAATTTTGATTTTACCCTTTATATAATAAAACCAGTGTATAACCTATAGTGCAGACTGTGTACGTTATTTGTGGTGCGACAGTTAAAACGTTGGCATCGCTGTTTTGCTCCCCTCAGTAGTTATTCATGTTGTCTAAAGAGTTGGTTTTTGGCCTTATCGTGTCCATGTTGGGAGGTAAAGTAGAATGTGTCAAGTGTAAAAGTTGCTAGGAGTACTGAACTCTGAACGATGGTGTGCTGCAGTTTAATGTACGAGTTGAGCGAGTGAGAGGTTGCGTTAACCAATGTACCTGGATTAGTTTGTTCAAAGCATTTGCACAATATTTTTGAATTCATGGGCTTACAGAAGTTGTTGGTTCATGTCTGTATATGTTAATGTATATACTCATAaaagggtttaaaaaaataaaaaggaaacaaaaggtATCAATATATCTAATATTCAtcctgcttttgttttgaaagtCCATTTCTGACCTGAGGGTTTCATCTTAAACACCAGAGGCCGGCAGTCACTTCACTCTGTAAACTAGTATGGATCTGTATCTGCTCATCATTCATTTATGATGCCCATTTACCAAATTCAGCACTCCTGTGTAGAAGTCGAGGTCAGAggtaataatacattttgtcaGAGGTGAAACGAGAGCAACTCGGTTGTCTGGATGTGCTCTCGCTGATTCAACAGCCATGTTTCCCAGGACGTGAGATTATTCATTCACCAGCATAGTTTGTCACTAAGTGGTTTTCAAAGCCTCTGTTGAGGAATACATATAATAAAGAAACATTGTATTTGA
>XM_039814933.1
GGGGGCTTGGGTGAGGGGCCGGAGAGCCGAACtcttggttggttggttggttgatgggggaaacaacaacaagctAGGCATCATGAGGGTCCCTGAAACACTGATTTGGACCGCTTTTCTCATCCAGAAGGTGGTGGGAGAGTATGGCATGGCTCATTTCAGTGACAAGGGCAAGAGCAATGGAAAGGATTACTGCATATTCTTTAACTCACAATGGGCACGTCTACCTCAGGACCTCAATAAAGCATCACGTCTTCAGATCTATGACCTGACAACATCGGTCCTGTGCTCGCCCTCCGACGTCCCGGAGGGAGGCTTCCCAAATCGCATCCCCATGGTGATGAGAGGCAACTGCACTTTCTATGAAAAGGTCCGACTGGCCCAGATTAACGGCGCCAAGGGCCTTCTCATCGTCAGCAAGGACAGACTGACACCACCAGCAGGAAACAAGACTCAGTATGAGGAGATTGACATTCCTGTAGCACTGCTCAGCTACTCTGATATGCTGGACATAGGCAAGACCTTTGGTAAAGGAAGACTGGTCGCCATGTACGCACCCAATGAGCCAGTGTTGGACTACAACATGGTGATCATCTTTTTGATGGCAGTAGGAACTGTTGCCATTGGAGGTTACTGGGCTGGCAGCAGAGACAGCAAGAAACGCTACATGAAGCACAAGCGGGACGACGGTGCGGAGAAGCAGGACGAGGAGACCGTAGACGTCACCCCCATCATGACCTGTGTGTTCGTGGTCATGTGCTGCAGCATGCTGGTGCTACTCTACTTCTTCTATGATAGTCTGGCCATTTGGGTCATAGCCATCTTCTGTGTGGCCTCCTCTGTCGGCCTCTACAGCTGTCTCTGGCCGTTTGTCAGGAGACTCCCTTTCTGCAAGTGGAGGGTCCCAGAGAACAACTTGCCATACCTGCACAAACGGCCGCAGATCCGCATGTTGCTGCTGTCGGCCCTCTGCATTGGTGTCAGCATCACCTGGATGGTGTTTCGCAATGAAGACCAGTGGGCGTGGGTGTTACAGGACGCCCTGGGGATCGCCTTCTGTCTCTACATGCTCAAAACAGTCAGACTCCCCACATTTAAGGCTTGCACCTTATTACTGTCGGTCCTTTTTGTCTATGatgttttctttgtatttattaCACCCTTCTTTACAAAGAGTGGGGAAAGTATAATGGTGGAGGTAGCGGCTGGTCCCTCTGACTCCTCCATGCATGAAAAGCTTCCAATGGTGCTCAAAGTGCCAAGGTTaaactcctctcctctggcTCTTTGTGACCGGCCCTTCTCTCTCCTGGGCTTTGGTGATATCTTAGTACCAGGTCTGCTGGTGGCGTACTGTCACAGGTTTGACATTTTAACACAATCCTCCAGGATCTACTTTGTGGCCTGTACGATCGCTTACGGCATCGGCCTGCTGATCACCTTCGTGGCCCTGGCCTTCATGCAGATGGGTCAGCCGGCCTTGCTCTACCTGGTGCCTTGCACTCTGCTCACCAGTCTCACTGTAGCACTGTGGCGCAGGGAGTTGCCCCAGTTCTGGACTGGAAGTGGATTTGTGTGTGCTGCTGAGGGCTCAGCTGTCTGTGAATGTCACTGCAGCCTCCCATAGTGCTATCACCAATCAACTGTACACAAACTGCAGCGCCGCAGACAGAGGATCACTTGACTAAACCGGAGCCGCAAACCACAGAAGAAGACTCACCCCACTTCCCGCCTCAGGAAACGCCCCCAGCtgagaaag
>XR_005640621.1
GGGGGCTTGGGTGAGGGGCCGGAGAGCCGAACtcttggttggttggttggttgatgggggaaacaacaacaagctAGGCATCATGAGGGTCCCTGAAACACTGATTTGGACCGCTTTTCTCATCCAGAAGGTGGTGGGAGAGTATGGCATGGCTCATTTCAGTGACAAGGGCAAGAGCAATGGAAAGGATTACTGCATATTCTTTAACTCACAATGGGCACGTCTACCTCAGGACCTCAATAAAGCATCACGTCTTCAGATCTATGACCTGACAACATCGGTCCTGTGCTCGCCCTCCGACGTCCCGGAGGGAGGCTTCCCAAATCGCATCCCCATGGTGATGAGAGGCAACTGCACTTTCTATGAAAAGGTCCGACTGGCCCAGATTAACGGCGCCAAGGGCCTTCTCATCGTCAGCAAGGACAGACTGACACCACCAGCAGGAAACAAGACTCAGTATGAGGAGATTGACATTCCTGTAGCACTGCTCAGCTACTCTGATATGCTGGACATAGGCAAGACCTTTGGTAAAGGAAGACTGGTCGCCATGTACGCACCCAATGAGCCAGTGTTGGACTACAACATGGTGATCATCTTTTTGATGGCAGTAGGAACTGTTGCCATTGGAGGTTACTGGGCTGGCAGCAGAGACAGCAAGAAACGCTACATGAAGCACAAGCGGGACGACGGTGCGGAGAAGCAGGACGAGGAGACCGTAGACGTCACCCCCATCATGACCTGTGTGTTCGTGGTCATGTGCTGCAGCATGCTGGTGCTACTCTACTTCTTCTATGATAGTCTGGCCATTTGGGTCATAGCCATCTTCTGTGTGGCCTCCTCTGTCGGCCTCTACAGCTGTCTCTGGCCGTTTGTCAGGAGACTCCCTTTCTGCAAGTGGAGGGTCCCAGAGAACAACTTGCCATACCTGCACAAACGGCCGCAGATCCGCATGTTGCTGCTGTCGGCCCTCTGCATTGGTGTCAGCATCACCTGGATGGTGTTTCGCAATGAAGACCAGTGGGCGTGGGTGTTACAGGACGCCCTGGGGATCGCCTTCTGTCTCTACATGCTCAAAACAGTCAGACTCCCCACATTTAAGGCTTGCACCTTATTACTGTCGGTCCTTTTTGTCTATGatgttttctttgtatttattaCACCCTTCTTTACAAAGAGTGGGGAAAGTATAATGGTGGAGGTAGCGGCTGGTCCCTCTGACTCCTCCATGCATGAAAAGCTTCCAATGGTGCTCAAAGTGCCAAGGTTaaactcctctcctctggcTCTTTGTGACCGGCCCTTCTCTCTCCTGGGCTTTGGTGATATCTTAGTACCAGGTCTGCTGGTGGCGTACTGTCACAGGTTTGACATTTTAACACAATCCTCCAGGATCTACTTTGTGGCCTGTACGATCGCTTACGGCATCGGCCTGCTGATCACCTTCGTGGCCCTGGCCTTCATGCAGATGGGTCAGCCGGCCTTGCTCTACCTGGTGCCTTGCACTCTGCTCACCAGTCTCACTGTAGCACTGTGGCGCAGGGAGTTGCCCCAGTTCTGGACTGGAAGTGGATTTGTGGTGAATACCAGTTTGATATGACCGTCTACTGCCGAAGAACAAAAAACaatcaacaaaagaaaaaaaatctagtgTAAAATAACATGCGAGTAAAGTAGAATTTTAAGCCTCCCATAGTGCTATCACCAATCAACTGTACACAAACTGCAGCGCCGCAGACAGAGGATCACTTGACTAAACCGGAGCCGCAAACCACAGAAGAAGACTCACCCCACTTCCCGCCTCAGGAAACG

Function

symbol description
sppl2b Enables aspartic endopeptidase activity, intramembrane cleaving and protein homodimerization activity. Involved in membrane protein ectodomain proteolysis; membrane protein intracellular domain proteolysis; and regulation of immune response. Located in several cellular components, including bounding membrane of organelle; cytoskeleton; and nucleoplasm. Is integral component of cytoplasmic side of endoplasmic reticulum membrane and integral component of lumenal side of endoplasmic reticulum membrane.

NR:

description
PREDICTED: signal peptide peptidase-like 2B

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0050819 negative regulation of coagulation biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004190 aspartic-type endopeptidase activity molecular_function

KEGG:

id description
K09597 SPPL2B; signal peptide peptidase-like 2B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814932.1 True 4188 mRNA 0.44 15 18480670 18494488
XM_039814933.1 False 1759 mRNA 0.53 16 18483140 18494488
XR_005640621.1 False 1809 transcript 0.51 15 18483156 18494488

Neighbor

gene id symbol gene type direction distance location
LOC120569106 NA coding downstream 174053 18300412 ~ 18306617 (-)
LOC120568294 LOC104961359,LOC103353055,LOC100705071,LOC102788160 coding downstream 236412 18236790 ~ 18244258 (-)
LOC120568289 LOC102296215,LOC102788438,LOC102202758,LOC101476248,LOC100704618 coding downstream 305344 18171649 ~ 18175326 (-)
LOC120568287 LOC103353056 coding downstream 310181 18151116 ~ 18170489 (-)
LOC120568865 tpm4,LOC107383605,LOC102218802,LOC103146061,LOC103479776,LOC100703626,LOC102199996,LOC106537044,LOC101474423,LOC102789012,LOC106914771,LOC108232925,LOC106936184 coding downstream 410233 18060695 ~ 18070437 (-)
phc3 NA coding upstream 13967 18508455 ~ 18521023 (-)
gpr160 NA coding upstream 108819 18603307 ~ 18604790 (-)
sec62 sec62,LOC102781860 coding upstream 134486 18628974 ~ 18646415 (-)
samd7 samd7,LOC102781561 coding upstream 152593 18647081 ~ 18655196 (-)
ackr4a LOC103360849 coding upstream 342184 18836672 ~ 18841174 (-)
G115782 NA non-coding downstream 24668 18454033 ~ 18456002 (-)
G115738 NA non-coding downstream 94711 18378400 ~ 18385959 (-)
G115722 NA non-coding downstream 184882 18295562 ~ 18295788 (-)
LOC120568297 LOC101477959,LOC103353052,LOC102786864,LOC103479784 non-coding downstream 194615 18270334 ~ 18286055 (-)
G115710 NA non-coding downstream 220386 18259924 ~ 18260284 (-)
LOC120568822 NA non-coding upstream 40159 18534647 ~ 18535613 (-)
G115848 NA non-coding upstream 120313 18614801 ~ 18615272 (-)
G115851 LOC103353035 non-coding upstream 126345 18620833 ~ 18621220 (-)
LOC120568692 NA non-coding upstream 168353 18662841 ~ 18663776 (-)
G115867 NA non-coding upstream 189118 18683606 ~ 18684244 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other downstream 422511 18052984 ~ 18058159 (-)
ly97.3 NA other downstream 1371766 17039800 ~ 17108904 (-)
G115406 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 other downstream 1435608 17043126 ~ 17045062 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other downstream 1668752 16756331 ~ 16811918 (-)
G115312 ralbp1,LOC102778314 other downstream 1840858 16637108 ~ 16639812 (-)
LOC120568909 LOC103353029,LOC104955147,LOC101484702,LOC102780695 other upstream 208576 18703064 ~ 18720587 (-)
G115941 NA other upstream 350417 18844905 ~ 18846277 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other upstream 437486 18931974 ~ 18935491 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other upstream 727303 19221791 ~ 19222726 (-)
G116138 NA other upstream 970212 19464700 ~ 19465380 (-)

Expression


Co-expression Network